Etheostoma cragini (Arkansas darter): 117949614
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Entry
117949614 CDS
T07493
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117949614 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117949614 (myo5c)
04131 Membrane trafficking [BR:
ecra04131
]
117949614 (myo5c)
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117949614 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117949614 (myo5c)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117949614 (myo5c)
mRNA cycle factors
P-body specific factors
117949614 (myo5c)
Membrane trafficking [BR:
ecra04131
]
Others
Actin-binding proteins
Myosins
117949614 (myo5c)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117949614 (myo5c)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117949614 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
nSTAND3
Myosin_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117949614
NCBI-ProteinID:
XP_034735919
LinkDB
All DBs
Position
8:complement(12917309..12927727)
Genome browser
AA seq
1741 aa
AA seq
DB search
MALLDLYTEYNRVWIPDAEHVWKSAEITRDFHFGNNFLELLLEDGTEHCYPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVDSKIIYTYCGIILVAVNPYKQLHIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQMCSCAHLQEFKNLRLLSADKFRYTCMGGEITIEGVD
DEKDMEETRRTFSLLGLMDDFQSDVFQVLAAILHLGNVEIRNSGDGKSSIPPGDSHLAVF
CELLGVSAEGLGRWLCHRRIVLVAETVVKPVPKERAVNARDALAKQIYAHLFDCIINRIN
TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDTLYEELVDIMRVSKFPFLANLFQEEKSTVTT
KGVKVRPARPAVKPTNKQLRTSVGDKFCSSLALLMETLNATTPHYVRCIKPNDEKLPFEY
DSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEEDLSDKKQTCKNVL
QRLIQDPDQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSQKRKFLRMRD
AAIILQQYIRGKRTIRKTVTAATLKQGWAAMVVQRYWRGYRMRQIFQLVRLASVTIQAFT
RGWMARKRYKKMVKEQKALILQKYARAWLARRRFQIMRRLVLNVQLSFRVQQLRKKIEEQ
NKENRGLMERLTSLANSHAQTVDRLQGLEAQLEKSTNRNASLEAREKKAKEDACLTTAQL
QKEIDALKFEKQNLEKKFEASTKEAKESFDQIKRNLLEEKEYEARLRKIAENNIEIQRQD
HEKLVETLKEEIKRLKEERVSLQRKMEDGGQVNSDLQEQVIQLTKHVKAIPELRRELNNL
QNQRNNMDRQMKQQSEQARAKMKDITRQLLGGIVEEEVLLGLTPNDSEKIYEVEDLLAAF
DGLQKATRILESHQKEQKERHETQVEGLKLKVDHLQNENSKLQSLFQEKSNVNENIRQEV
SRLSSENSVLPELKLQVSELQRQKQELEAYILKQSRELAEKTEEITNILQRKIKEESSRR
SHFEEKAEELEELKRQLQDRVEELEEENDHSKRQLLMETEAKSKLRQATSQLTAENMDFE
EQLDQKDRLIKKLQNQIKSLETSQKAKQTSAPAMPRDYLGMLEYKREDESRLIQNIILDL
KPKGVVVSVIPAMPAYVLFMCVRHADYLNDEVKLKSLMTAIIGAVKKVITSHHKDFEMLS
FWLSNTYQLLNCLKQYSGEEEFLKQNTPRQKKNCLQNFDLSEHRQILSDLAIQIYYRFLS
AIEKILTPAIVPGMLEHESLQGISSMKPSGFRKRSNSIYEDSETYTISSILQQLSMFHST
MCQHGMEQGLIQQAFKQMFFLIGATTFNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEKE
LQSSNAIDTLRPLSQAAWLLQVNKSTDEDAKEITEKCPELNPVQIVKILNSYTPIDDFEK
RVSSSFVRKVQSLLQDRDGSTQLMLDLDYRFQVTFPFCPSSQALELLQVPSSLHLDFLTR
I
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggatctgtacaccgagtacaacagagtgtggataccagatgcagaacat
gtgtggaaatcagccgagatcacgagagactttcattttgggaataattttcttgaattg
cttctcgaagatggcactgagcactgctaccctgttgacccgtcaaaaccacaactccct
ccacttcgcaacccggacatcttggtgggggagaacgacctcaccgctctcagctacctg
catgaacccgcagtcctgcataatcttaaagtgcgatttgtggattccaaaatcatctac
acctactgtggcattatactggtagctgtaaatccatacaagcagcttcatatctatgga
gatgcaatcattcatgcatactcgggccagaacatgggagacatggaccctcatatattt
gcagtggctgaggaggcttacaaacagatggccagaaaccacaagaaccagtctatcatc
gtcagtggtgaatctggagccggcaaaacagtgtctgcccgatacgctatgaggtacttt
gctgttgtaagcaaatctggaagtaagactcgagttgaagacaaagtcctggcatccaat
ccaataacagaggcaataggaaatgcaaagaccaccaggaatgacaatagcagccgtttt
gggaaatacacagagatcagctttgacaggaggtaccggatcattggagcgaacatgagg
acctatctcttagagaaatccagagttgtttttcaggcagacaatgagcgaaactatcac
atattctaccagatgtgttcctgtgctcatctgcaagagttcaagaatctaagactgttg
agtgcagataagttccggtacacctgcatgggcggtgagatcactattgaaggcgtagac
gacgagaaagacatggaggagactagacggaccttctcgctgctagggttgatggacgac
tttcagtcagatgtcttccaagttttggcagccattctgcatttgggaaatgtggaaata
cgaaactctggagatggcaaatcatcaattcctcccggtgattcacacttggcagtcttc
tgtgagttgctgggtgtgagcgcagaagggttggggcgttggctgtgccatcggaggatt
gttttggtggctgagacggtggtgaagccggtgcccaaagagcgggccgtaaatgccaga
gatgccctagccaagcagatctacgcccatctgtttgactgtattattaacaggataaac
acagcacttcaggttccaggaaaacaacacgctttcattggtgttctggacatttatggc
tttgaaacgtttgacatcaacagctttgaacagttttgcatcaactacgcgaatgaaaag
cttcaacagcagtttaacttgcatgtgttcaagctggagcaagaggagtacatgaaagag
gacatcccatggacattgatagatttctatgacaaccagccagtcattgacctgattgaa
gcaaaaatggggatcctggatttgcttgatgaagaatgtttgtttcctcagggcactgat
caaagctggctgcaaaagcttttcaactatcttgatgccaatcctctgtttgagaagccc
aggttatcaaatgaggcatttgtgattcaacactttgcagacaaggtggaatatcaatgc
agaggttttcttgaaaagaacagagacactctctatgaagaactggttgacattatgaga
gtcagtaagtttccttttctggccaaccttttccaagaggagaaaagcacagtgaccact
aaaggtgtcaaagtgaggcccgctagacctgcagtgaaaccaaccaataagcagctgaga
acctcagtgggagataagttctgcagctccctcgctctactgatggaaacactgaatgct
accaccccacactatgtgcgctgcatcaagcccaatgatgaaaagctcccatttgaatat
gattccaggagggtggtgcagcagctgcgagcctgtggagtccttgaaactattcgtatc
agtgcacagagctatccgtccaggtggacatacattgagttttacagccgatacagtatc
ctaatgtcacaccaggaagaggacctcagtgacaagaaacagacctgcaagaatgttctg
cagaggttgattcaggaccccgaccagtacaagtttggtcggactaagatcttcttccga
gctggtcaggtggcctatctcgagaagctgcgtctggaccgactgagaggagcctgcgtg
accatccagaaacacgtccgcgggtggagccagaagaggaagttcctgcgcatgagagac
gcagccatcatcctccaacagtacatccgtggaaagaggacaatccgtaaaacagtgact
gctgcaacactgaagcagggctgggcagcaatggtggtccagagatactggagaggttac
cgcatgagacagatcttccagttagtccgtctggcctccgtcaccatccaggctttcaca
cgaggttggatggcccgtaaacggtacaagaagatggtaaaggagcagaaagccctgatt
ctacagaagtatgccagagcatggctggcacggcggcgttttcaaatcatgcgtcggctg
gtgctcaatgtacagctctccttcagggtgcagcagctcagaaagaagattgaagagcag
aacaaagagaaccgtggattaatggaaagactgacaagcttggccaactcacacgctcaa
actgtggacagacttcagggtttggaggcacagctggaaaaatcaaccaatcggaacgcg
tctttggaggcaagagagaagaaagcgaaagaagatgcttgcctgacaactgcacagctt
caaaaggaaatagatgcactgaaatttgaaaagcagaacttggagaaaaagtttgaagct
tctaccaaagaggccaaagaaagctttgatcaaataaagaggaaccttctggaagaaaaa
gaatacgaagccaggcttagaaaaattgcagagaacaacattgagatccagagacaggac
catgagaagttggtggaaactctaaaagaggagattaagagattgaaggaggagagagtc
agtctgcagagaaagatggaggacgggggccaggtgaactctgacctgcaggaacaggtc
atccagctcaccaaacatgtcaaggccattcctgagctacgcagggaactcaacaacctg
caaaaccagagaaataacatggaccgacagatgaagcaacagtcggaacaagcaagagct
aaaatgaaggatattacaagacaacttcttggtggcattgttgaagaggaggttcttttg
gggctaactccaaacgactctgagaagatttatgaagttgaagatttgctggcagccttt
gatggcctacagaaagctaccagaatcctggaaagccaccagaaagagcagaaggagcgc
catgagacccaagtggagggtttgaaactgaaagtggatcaccttcaaaatgagaacagc
aagttacaaagtctgttccaagagaaaagtaatgtcaatgagaatattcgccaagaagtg
tccaggctcagcagcgagaactcagttttaccggagctgaaactgcaggtctcagagctg
cagagacaaaaacaagaactggaggcttacatattgaagcagagcagagaactagcagaa
aaaactgaggagatcactaacattcttcaaagaaagattaaagaagagagctcacgacgc
agtcactttgaggagaaagctgaagagctggaggagttgaagaggcagcttcaagacaga
gtagaggagcttgaagaggagaatgatcactcgaaaagacagctgctgatggagactgag
gccaagagcaaactgagacaggcgacttcacaattaactgctgagaatatggactttgaa
gagcagcttgaccagaaagatagattaataaagaaactccagaatcaaataaagagcctt
gaaacatcacagaaagcaaagcaaacgtctgcgcctgccatgcccagagattaccttggc
atgttagagtacaagagagaggatgaatccaggctcattcaaaacatcattttggaccta
aagcctaaaggcgtggtggtcagtgtgatccccgcgatgccggcttatgtcctcttcatg
tgtgtccgccacgctgactacctaaatgatgaagtcaaactcaagtctttaatgaccgcg
atcattggtgctgtcaaaaaggtcatcacgagtcaccacaaagactttgagatgctgtca
ttctggctctcgaacacgtatcagctgctcaactgtctgaagcagtacagcggggaggag
gagttcctgaaacaaaatactcctcgccaaaaaaagaactgcttgcagaatttcgatttg
tctgaacacagacagattctcagcgacctggccattcaaatctactatcggtttctctcg
gccattgaaaagattctcactcctgcaattgtacccggcatgttggagcacgagagttta
caggggatctctagcatgaagccgtcgggcttcaggaagcgttccaacagcatctacgag
gactcagagacatacaccatctcctccatccttcagcagctcagtatgtttcattccacc
atgtgccaacatggcatggagcagggcctcatccaacaggctttcaagcaaatgtttttc
ctaattggtgccaccaccttcaacaacatcatgctccgcaaagatatgtgctcctgcagg
aagggaatgcaaatcagatgtaacatcagttacctggaggaatggctgaaggagaaggaa
ctgcaaagctccaatgctatagacactctgaggccattgtctcaggctgcctggttactg
caagtcaacaagtccactgatgaagatgccaaggagatcactgaaaaatgccctgaactc
aaccccgttcagattgtcaagattttgaactcctacactcccattgatgattttgagaaa
agggtgtcgtcgtcatttgtccgcaaagttcagtcgttactacaagatcgtgacgggtcc
acacagttgatgctggacttagactatcgtttccaggtcacgtttcccttctgcccatca
tcgcaggctctggagctgctgcaggtcccgagcagccttcatctggatttcctgaccagg
atctga
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integrated database retrieval system
