Etheostoma cragini (Arkansas darter): 117949616
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Entry
117949616 CDS
T07493
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117949616
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Other basic domains
RF-X
117949616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
117949616
NCBI-ProteinID:
XP_034735924
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All DBs
Position
8:complement(12971477..12984430)
Genome browser
AA seq
1506 aa
AA seq
DB search
MADVQQQPGLKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDSILQDVEKF
TDIEKLYLYLKLPSGPSSGNDKRTENERGSSTPGLCDQSSMSSSRTQQMYAFNWIRNHLE
EHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYS
GLRKKAFVHMPSLPNLDLQKSGDGCELMESTGQSPSAEDEMRSAACGLVCEWAQKVLSRQ
FDNVEDLARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTAEANSFQPQVKTL
PSPSVDAKQQLQRKIQKKQQEQKLHSPLPNEVQVKRTEASTPGPTIPCGSPALLSPQPTI
GIVVAAVPSPVTVQRGRQLMTSPSPVGTAEGKVLPVNFQVVTQSLKQSPKHPQNISASPV
GDRLARHGTRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMPTPHVSSVNVVKMTAIA
LAPNSSSTTVRPASAGVNTIAALDDSQQPHGGTSFAHQSSSIKPSALVSTPILSTDIKVV
SEIGNEYNPNHGTEKTAVGGKEERMAKFRAASEPSFLIKCSPGPDKGSRIKSDPTSPPVS
VAVAGTQDSNNSNCHDSTLYLTVDNQSSNSNTISIGSSAVTPTTKDPCLDAKSPRKRTGP
TGESHVIPVKRVFISQQPLAIIDNPKPGINAAVKRIPRPGTPARPESAPCKVTVKHTCIG
PTQILALSDSPITHTEGSQTIVKPQVLMVKREDHSLSTDSSTGAAGNNTSDQALLRQITG
DPHAIPANSGAHEASVMSDLKSTMWEEKELDVLRKQAFVQQISAEHKQAPTDQLSIIAQP
PEASGSLTLTQEMVDFAGSQSNMDYFPFNDDDMTQDSIVEELVQMEEQMKLKGLFGSCVD
VSLQGQSASNQGSILNAHQAGTTFFHSAHSSTTPVQTPTPTPTPTPTPTPTSEMTLGHSL
TRESPCSRMAPITPVDGAMGRHTPISTPLSNCSSSVPPSPVECRNPFAFTPINSSITGYH
DASIVSSSPVKPMQRPMATHPDKAKLEWINNRYNSNSAGPLPNHSIGILPSYQDLVDDQF
RKPHAFAIPGQSFQAQSRQDAAHFGRLTPISPVQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQLVTGVTTPTKQESFAVPAPLDNKVSTSSASSTFRCRSVSPAVRQRNFSGNTGPPTTIT
NTTTTTRAVVSPFNSPITSEVLSILSNSQTVGSVHSMVQRSQSVPLNIMMQSEMLPVQGQ
SNTAKITNVLLSKMEADGDDSVRGLGINNLPSNYTARMNLTQILETTPGFAGGTAHQTQL
PVSSSPAAFELQQHGYLTTGSGEQVSFSTGDSQAQAGPAEQDRQQLQENAVQTQPQLLLQ
STQQQEVEDEQQLDFNNTVKDLLGDDGLNPSSQLVGQVASELNAVASDFTNDIRLTSDLS
SSITDLNTLDTNLLFDPNQQQEQYEDSTLEELKNDPLFQQICSDTVNSGFDWLESKDQPT
TVEMLG
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttcaacaacaacctggtctgaagcctgcctcgggattaggctctcttcca
gcgctggtgccaggactccaagggcccgaggctaacgcgttacagttcaaaataaagaat
tcaatttgcaaatctgtacaatcaaaggtggacagcatattgcaagatgttgagaagttt
acagacatagaaaaactctacctctacctgaagttgccttctggtcccagcagtggcaat
gataaaaggactgagaatgagagggggtcctccactcctggattatgtgatcagagttcc
atgtcgtcaagccgtactcaacagatgtatgcatttaactggatacgaaatcacctagaa
gagcacccagagacttcactcccaaagcaagaggtgtatgatgaatacaagagctattgt
gacaatcttggctacaatcccctgagtgcagcggactttggaaagatcatgaagaatgtc
tttcctaacatgaaggctcgtcgactgggcatgaggggcaaatccaaatactgttatagc
gggttaaggaagaaagcttttgttcacatgccatccttacccaacctggatctgcaaaaa
tctggtgatgggtgtgagctgatggagtcgacggggcagtccccgagcgctgaggatgaa
atgagatctgcagcctgtggactggtgtgtgagtgggctcaaaaggtcctgagtcgtcag
tttgacaacgtggaggacctggcccgcttcctgctcaacagccactacattggtactaaa
tccatggctgcactcactgttatgaccggaacacccacaggaatgaagacaccaactcca
gcctctgcgtttgtgccaacagctgaggcaaactctttccagccccaagtgaagaccctg
ccctctccttctgttgatgcaaagcagcaactgcagcgcaagatccagaagaagcagcaa
gagcagaagctccactcacccctgccgaatgaggtccaggtcaagagaacggaggccagt
acccctggcccgaccatcccctgtggcagccctgctctgctctcccctcagcccaccata
ggcatcgtggtagcagctgtccccagcccagttacggtacagagaggtaggcagttgatg
acctcacccagccctgtagggacagcagaggggaaagtgttgcctgtcaacttccaagtg
gtcactcagtctcttaaacagtcccccaaacatccccagaacatctcagctagtcctgtg
ggtgaccggctggcacgacacggcacacggtacgcacaaattctgcccaagccctctgcc
accagtgccatcacgctgcgctcaccccctaccctgctcatcactaacagtcccataaaa
accgtaatgccaactcctcacgtcagctctgtcaacgtggtaaagatgacggccattgcc
ctggcccccaacagcagtagcacaaccgtgcgtcctgcctctgcgggtgtgaataccata
gctgctttggacgattcccagcagccacacggtgggacctcatttgcccatcagtcttct
tcaatcaaacccagtgccctagtctccaccccaatcctctccactgacattaaagttgtg
tctgaaattggaaatgaatataaccccaaccatggcacagagaaaactgctgttgggggc
aaagaggagagaatggctaagttcagggctgccagtgagccgagcttcctgattaagtgt
tctcccggaccagacaaagggtcgaggataaaaagtgaccccacatcccctcctgtctct
gtagctgtagctgggactcaggacagcaataacagtaactgccatgacagtactttgtac
ttgactgttgataatcagagctccaatagcaacacaatatctataggctcatccgctgtt
accccaacaacaaaggatccctgcctagatgccaagagccccaggaagcgcacaggccca
accggggagtcccatgtgattcctgtgaagagggtgtttatctcccaacagccactggct
ataattgacaatcccaaacctggaatcaatgctgcagtgaagaggatccccagaccggga
acccccgccagaccagagagtgccccctgcaaagtgactgtgaaacacacctgcataggg
cccacacagattcttgcactttctgactcgcctatcacacacactgagggttctcagact
attgtcaaaccccaggttttgatggtaaaacgtgaagaccattctctaagtactgattcc
agcactggagcagctggaaacaacacgtctgatcaggcgttgctacggcagatcaccggg
gacccacatgccataccagccaactcaggagcacacgaagcctctgtgatgagtgatttg
aagagcacaatgtgggaggagaaagagcttgatgtgcttcggaagcaagcgtttgtgcag
cagatatcagcagaacacaaacaagcccctactgaccaactttccattatagctcaaccc
ccagaggcctcaggctcgctcaccctcacgcaggagatggttgactttgccggttctcag
tccaacatggactactttccgttcaatgatgatgacatgacccaggacagcatcgtggag
gagctagtccaaatggaggagcagatgaagctgaagggtctgtttggtagctgtgttgac
gtatctttacaaggccagtcagccagcaaccaaggctctatcctaaatgctcatcaggcc
ggcaccaccttcttccactctgcccacagcagtaccactcctgtccaaactcccactcca
acaccgactccaactccgacccccacccccacctctgaaatgacgcttgggcacagcctg
acgagagagagcccctgctcccgcatggctcccatcacccctgtggatggagccatgggt
cgccacacccccatcagcacaccactgtccaactgcagcagcagcgtccccccaagccca
gtggagtgcagaaacccttttgcgttcactcctattaactcaagcatcacaggttatcat
gacgccagtattgtttccagcagccctgttaagcccatgcagaggccaatggcaacacac
cctgacaaggccaaactggagtggataaacaaccgctacaacagcaactctgcaggtcct
ttgcccaaccatagcattggcattctgcccagctaccaagacctggtagatgaccagttt
cgtaaaccacatgcctttgccattcccggccagtcctttcaggctcagtcgagacaggat
gctgctcactttggccgcttaaccccaatttccccggtgcagcaacaacaacaacaacaa
caacaacaacaacagcaacaacaacaacaacaacaacaacaacagcaacaacagcagcag
cagcagctggtaacaggtgtaaccactcccactaaacaggagagttttgctgtacctgca
ccattagacaacaaggtatcaacctcatctgcgtccagtactttccgttgccgcagtgtc
agtcctgcagtgcgccagagaaacttcagtggcaacaccggccctccgaccaccatcacc
aataccaccaccaccacccgagcggtggtttcaccctttaactcccccatcacctctgag
gtgctcagcatcctgtctaacagccagacggttggctctgtccacagcatggtccagcga
agccaatctgtacccctgaacatcatgatgcagagtgaaatgctgcctgtgcagggtcag
agtaacaccgccaaaatcaccaatgttcttctcagcaagatggaagctgacggtgatgat
tctgtccgtggcctgggtataaacaacctcccctctaactacacggcccgcatgaacctc
acacagatcctggagaccactcctggctttgctggaggaactgcgcaccaaactcagctg
cctgttagctctagccctgctgcctttgagctccagcagcatggctacctcaccactggc
agtggagaacaggtgagtttctcaactggggacagccaagcacaagcaggtcctgctgag
caagaccggcagcagctccaggagaacgctgtgcagacacaaccacagctcctccttcag
agcacacagcagcaggaggtagaggacgaacaacagctggatttcaacaacactgtcaag
gacttgttaggggatgacggcctcaaccccagttcccagttggtgggtcaggtagcttct
gagctcaacgctgtggcgtctgacttcacaaatgacatcagactgacctcagatctgtcc
agtagcatcactgatcttaacacgttggacaccaaccttctgtttgatcctaatcaacag
caggaacaatatgaagactcaacactggaagagctgaagaatgacccgctttttcagcag
atatgcagtgatactgtgaactctggttttgactggctagaaagcaaagaccagcctact
acagtagagatgctgggctga
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integrated database retrieval system