Etheostoma cragini (Arkansas darter): 117949633
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Entry
117949633 CDS
T07493
Symbol
caprin1b
Name
(RefSeq) caprin-1b isoform X1
KO
K18743
caprin-1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117949633 (caprin1b)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117949633 (caprin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
NOA36
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
117949633
NCBI-ProteinID:
XP_034735977
LinkDB
All DBs
Position
8:complement(13369687..13382395)
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AA seq
703 aa
AA seq
DB search
MPSAMNANRTVQSASPDVGSAPGSMVNFALGGQSEVMKQVLCVLDKKVRNMEKKKSKLDD
YQVRKDKGESLNQDQLEALSKFQEITNNLEFGRELQKTFITLGQDIQKVVKKSARREQLQ
REEAEQRRLKTVLELQFLLDRLGEDTVRQDLKQGVAGSTPLTDADLAAFDEFYKLVGPDR
DQNVRLVDQYEEASVHLWELLEGKDKAVVGTTYKALRETLDQILLSGYFDRFPSHQNGVC
GEEEEEEEEEEEEEEEDDDEEEEEEEEPASAAATATAAESSEAEEQAADPETEIIEEFTE
PIAMETTEFINRQFIPDGTYSSSEKEQGDEWTTETEAVSTMQPMQPSASPVALETHPLNL
ASPVPPADPLVRKQVVQDLMAQMQGTYNFMQDSMLEFDGQPIDPAIVSAQPMKPAQNMDL
PQMVCPPVHPESRLSQPSTVPVQPEPTQVSIVSPTPPPMYQTSHTPDPRPSTETIDPIQT
SMSLSSEQPPPSTALPPVPQTQVFQPVSKAPHSSGINVNAAPFQSMQTVFNLNAPVPPAN
ETEALNQANQYQNSYNQAFSSQPQHPVEQTEMQTEQLQSVVGAFHSQDQSGGHPQPPQQG
PGFVRQGQSFYNSRGMPRGGARNARGMINGYRGSSNGFRGGYDGYRPPFANTSNSGYGQT
QFNTPRDYSNGNYQRDGYQPNYKRGAGQGPRGVSRGSSQAIRS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagcgatgaatgcaaataggacagtgcagtctgccagcccagatgtgggatcc
gctccagggtcaatggttaattttgcacttggtggacagtccgaagttatgaagcaagtg
ctgtgtgtcctcgacaagaaggtccgcaacatggagaagaaaaagagtaaactggatgac
tatcaagtcaggaaggataaaggggagagtctcaatcaggaccagctggaggccctctcc
aaattccaggaaatcacaaataacttagaatttggccgggagttgcagaagacgttcatc
acactaggacaagatatccagaaggtggtgaagaagtctgcacggcgggagcagctgcag
cgggaggaggccgagcagaggaggctgaagacggttctggagctgcagttcctcctggac
cggctgggagaggacactgtgcggcaggacctgaagcagggagtcgctggctcaacgccg
ctgacagatgcagacctcgcagctttcgacgagttctacaagctagtggggccagaccgt
gatcaaaacgtcaggttggttgaccagtatgaagaagcatccgtgcatctttgggagctg
ctggaagggaaggacaaggctgttgttggaacaacgtacaaggcactgagagagactttg
gaccagattctgctgagtgggtacttcgaccggtttccatctcatcaaaacggtgtgtgt
ggtgaggaggaggaggaggaggaagaagaagaagaagaagaggaggaggacgatgacgag
gaggaggaggaggaggaagaaccggcctcagcagcagcaacagcaacagcagctgaatcg
tcagaagcagaagagcaggctgctgatccagaaactgaaataattgaggaatttacagag
cccattgcgatggaaacaacagagtttataaacagacagttcattccagacggcacatac
agcagcagtgagaaggagcaaggggatgagtggaccacggaaacagaggcagtcagtaca
atgcagcctatgcagccttcggcttcacctgttgccctggagacccaccccttaaaccta
gcgtctcctgtgccgcctgctgaccccctggtcaggaagcaggtggtgcaggacttaatg
gcacagatgcagggaacgtacaacttcatgcaggactctatgctggagtttgacggacag
cccattgatcccgccattgtctcagcgcagcctatgaaacccgctcaaaacatggaccta
ccacagatggtgtgtcctccagttcacccagagtcccggctatcgcaacccagcactgtt
cctgtccaacctgagcccacacaagtttctatcgtctctccaactccaccccctatgtat
cagacctcacacacgccagaccctcgaccctccacagaaaccatcgaccccatccagacc
tccatgtccttgtcatcagagcagcctcctccctctacagctctcccacctgtccctcaa
actcaagttttccagcctgtttccaaagctccacacagcagtggcatcaatgtcaacgca
gcaccattccagtcaatgcagacagtgttcaacctcaatgccccagttccgccagctaat
gagacagaggctttgaaccaggccaaccaataccagaacagctataaccaagccttcagc
agccagccgcagcatcctgtggagcagacagagatgcagacagaacaactgcagtctgta
gtcggtgccttccattcccaagatcagtctggaggccatccacagcctccccagcagggc
ccaggcttcgtcaggcagggtcaatccttctacaacagcagagggatgccacgtggtgga
gctcgcaacgccaggggcatgatcaatggctacagaggctcatcgaatggattcagaggt
ggctatgatggttatcgtcctcctttcgccaacacttcaaactctggttatgggcagact
cagttcaacacacctcgggattactcaaatgggaattatcagagggatggttaccaacca
aactacaagcgtggagctggtcagggacccagaggagtgtcaagaggcagctctcaggca
atacgatcctga
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