Etheostoma cragini (Arkansas darter): 117949849
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Entry
117949849 CDS
T07493
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117949849 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117949849 (tprb)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117949849 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
DUF7491
Motif
Other DBs
NCBI-GeneID:
117949849
NCBI-ProteinID:
XP_034736261
LinkDB
All DBs
Position
9:7780180..7803034
Genome browser
AA seq
2363 aa
AA seq
DB search
MAALLLQELEASAISEIAKLPKTIQNKLEKIFSDQQYEIDYLKAQHEQFRVDSEQHFFEK
VKQLAQCQEEFLSQTQEYLKLKEEFTKQEEDLKRVLQKNKEYESTQERLSSEQTLLSKAK
EELEAEKRELVRTLERRSLEVEHLNDDFRQLNDKLVEVNTSKMALQMKLDELESAEVNIK
YKEKRMEQEKELLNGQTSWLNEELKAKSEELLSLSRQKGNEILELRCNLENKEDELNRLQ
DQVASLKTSNEHLQKQNEDMISKLKEAKEQQATMEEKFRNELNANIKLSNLYKGAAADSE
AKSEELSGAVEELHKLLKDAGEANKALEEKLQEMNGATDKSVTELKERIQGLEKELDNAN
ELLSSSKLRGPTGTSVVTEEQMTTMSPTAVAVSKIKPGMKLTELYSAYVESQEQLQLERL
ENKRVNKYLDDIVQEVEAKAPILKRQRDEHERLQKSVASLSAKLEQAVKEVHRLQKEADE
ANKRSSVLERENQRCELQLGDMAQQVRVLLIELEEARGNHVVHEEDVSSADVSSTSEVIS
QHLVTFRGVEELQKQNQRLLVALRDLSDAQEKEEFEAIGNKRGELEQSLEKAKVELESLK
EQRGQQIKMTESIVRQRDMYRLLLAQATGVSFPHQGTPPEEFSLASTPRRSPAAMATPGT
PTTLVSMATESAEALEAKAALRQLQEVFSTYKKEHMESTKALTEQNEKLQDQISDLHSQN
AKISTQLEFASKRYEMLQDNVERYRKEIASLREKGQKMAADSQKHEQTIHTLNEDLKAAK
EKLTMLEGHAETLRKERDMLKLVESRLNQEKESIMTQQQSQSLLLTNLQTIQATLERSET
DTRQRLNSQLEKQEREISQLQKRLEHEVEQRHLLSRNQEIQLLETKRQLELQLPLQQKTK
ELLNAAELELNTLRLQLGSNEARHTLNCPTTQTIRGLPGSDQDKEDLQCRLRLAETRTEE
LAESLRAATSSMEQYRAMAQSLEESLDKEKQVTEQARSSIEARIKEAENQHRRLEEKLLE
AEKDKNNLEEEKRRALATLEEEMNSLRNSLSSAQADHQAVLQQLAVAEAQQQQALQDSQE
QAKMAAEAQDKYEREMMLHAADVEALQAAKAQALQAIELRHQLDERAQRVSAELLEARVS
WGEQEKIIKEEMSKMESRYEDLQRQNTLLHEQIQTMSCKMADKLQHAASESPMNISLTEE
GKSQDQILEILRFVRREKEIAESRFEIAQGESLRYRLRVEHLERELKEMQDSLSAAKERM
QVTAKTLSQHDELMKKTETMSILMETNKMLREEKDKMMQELQQTQAKVQKLESDIMPLQQ
ANTELSEKSGMLQAEKKLLEEEIKRWKARTQHLVTQQKDSDPEKEAHVKRILQLTEDSTR
LKAEILRSNNLTTSLQSQIQNLRDNVSKITDEGNSLKKEVENKNQELQEKGRTITQVKKI
GRRYKTQYDELKVEHDKLVAEAAAGPSQEEEARQASVQELQSLKDSLHEAEAKTRELEGQ
LENINKVVTERETEGRNAQEQSSRLQAELTRLRQELQDKASQEDTLRQQMTEKEEKTRKA
IVYAKQKINQLMSTKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQERELRDLRGQ
QERQEQRDEPPEAGPSKTQEQQRSTEQRQISLKTTPAADRGSASTSEPPTANIKPTPVAT
GSKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEAMQSTEGPPVEHVT
VYGSASGSVRSASPNVQTTLASPMLTVQQTQTQATAFVQPTQQQSMTHAEPANQEPSPVV
IEATPSSQVEWPSTSSTSSVFGTVSATPGTSSMSKRPREEEESATMVTDTESTQEENSRA
PIPKKLRIIQRVGPEEEVLVEDSAEAEGVVPTDSQDGAEASQTEEFPVLEEGDDGAASQS
VTMDQEVTLTQSETPEQQQHEVIVIVTDTESEEDQEEEDEEEEDQDYDEEEEEEEEEDEE
EEDEEDEEEDDGEMGEEGEDSNEGSRDGNEAYEGDDPEGADVTDPGTETEESLGASDSTQ
RPADSQTHSFEGSTMETYSTEQPITSSGTRMPQSPRRPTHQLAPRLNIAPTSELGPPAQV
QRMPVRRQSVGRVPQLTSGVPGSSQHFFDDDDRMVPSTPTLVVPHRSDGFDQAIHSPQVA
GVPRFRFGPSDDMPQPCSSSHSDLGQLASQGGLGMYESPLFLATQQEESGGRNVPTTPSQ
VTTPVTIFSEVAQSDIAEHSSQSVPTVSTSTPGLSAAAATGEDRDDVFLEPDTDGSSGEV
SVDPLVSQGDIEEPGQQSAKASLPSTSQEPSSSSADTSSAPPRPSRLGHSRQLQRWPEHR
GGRMKRGGQGFPSRGVHGRRFAR
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgctgcaagagttggaagcttctgcgatatctgagatagctaagcta
ccaaaaacaattcaaaacaaactcgagaagattttttcggatcagcagtatgaaatcgat
tatttgaaagcacaacatgaacaatttcgggttgacagcgaacaacacttctttgaaaaa
gttaaacaacttgctcagtgtcaggaagaatttttgtctcagactcaagaatatcttaaa
ctgaaagaggagttcactaagcaagaggaggatcttaaacgtgtgcttcagaaaaacaaa
gaatatgaatccacacaagagaggctgtcatcagagcagactctgctgtcaaaagccaaa
gaggaactggaggctgaaaagcgagaacttgtgcgaacacttgaaaggagatccttggaa
gtggagcatttaaatgatgacttccggcaactcaatgataagttggtggaggtcaacacc
tctaagatggccctgcagatgaaattggatgagcttgaatcagctgaagtcaacataaaa
tacaaggagaagcgcatggaacaagagaaggagctgctgaatggccaaacatcttggctg
aacgaggagttgaaggctaagagtgaggaactactgtctttgtcccgacagaagggaaac
gaaatcctggaactgaggtgcaacctggagaacaaggaagatgagttgaatagactccaa
gaccaagtggctagtttgaagacttcaaatgagcaccttcagaaacagaatgaggacatg
atcagcaaactaaaagaagccaaggaacaacaagccaccatggaggaaaagtttagaaac
gagctgaatgccaacattaagctttccaatctatacaagggagcagcagcggattctgag
gcaaaaagtgaagagctgagtggggcagtggaggagctacataagctgctgaaggatgct
ggagaagcaaataaggccctagaggagaagttgcaggagatgaatggtgccacagacaaa
agtgttactgagttaaaggagaggatccagggtctggagaaagagctggacaatgccaat
gagctgctgtcaagttctaaacttagagggcctactggtacatctgtggtcacagaagag
caaatgacgacaatgtctccaacagctgttgctgtatccaagataaagcctgggatgaag
ctgacggagttgtatagtgcatacgtggagagccaggagcagttgcagttggagcgattg
gagaacaagcgggtcaacaagtacttggatgacattgtgcaggaagtggaagcaaaagcc
cctatcctcaaacggcagagggacgaacatgagcgcttgcagaagtcagtggccagtctt
tctgccaagctagagcaggctgttaaggaggtacaccgtctgcaaaaggaggctgatgaa
gctaacaagcgctcctctgttctggaaagggaaaaccagaggtgtgaactgcagctgggg
gacatggctcagcaggtgcgcgtgctgctgatagagctagaagaagctcgtggaaaccat
gtggttcacgaggaggatgtgagctcagccgacgtcagcagcacatcagaggtgatcagc
caacacttagtgaccttccgtggtgtagaggagctgcagaagcagaatcagcgtcttctg
gtggcccttagggacctcagtgatgcccaggagaaagaggagtttgaggccattggcaac
aagcgtggtgaactggagcagagtttggagaaagccaaggttgagctggagtccctgaag
gagcagcgcgggcaacagattaagatgactgagtccatcgtaaggcagagggacatgtac
cgcttgctgcttgctcaggcaaccggagtcagcttccctcatcaaggtacaccacctgaa
gagttctccctggcctccaccccccgacgctcacctgcagccatggccaccccgggaacg
cccaccacacttgtttccatggcaacagagtctgctgaagccttggaggccaaggcagct
ttgcgacagttgcaggaggtgttctccacctataagaaggagcatatggagagtaccaag
gccttgacggagcagaacgagaagctccaggatcagatctctgaccttcattcccagaat
gccaagatatccacccaactagagtttgcctcaaaaaggtatgagatgctgcaggacaac
gttgagcgctacaggaaagagattgcttcccttagagaaaaaggacagaaaatggccgct
gactcacagaagcatgagcagaccatccacactttgaatgaggatctgaaagctgccaaa
gagaaacttaccatgcttgagggccatgctgagaccctgcgtaaggagagagacatgctg
aagctggtggagtcaaggctgaatcaggagaaagagtcaatcatgacccaacaacagagc
caaagcctgctgctgaccaacctccagaccattcaggccactcttgagcgttcagagact
gatacacgtcagcgtctaaacagccaattggagaagcaggaacgagagatctcccagctg
cagaagaggctggagcacgaggtggaacaacgccacctgctcagcagaaaccaggaaatc
cagttgctggagacaaagaggcagcttgagctacagctaccattacaacagaagaccaag
gagctgctaaatgctgccgagttggagcttaacacactccggctgcagctaggcagcaat
gaagcacgtcacacacttaactgccctaccacgcagactatcagaggcctgccgggttca
gatcaagacaaagaggacctacagtgccgcctgcggctggctgaaacccggacagaagag
ctagcagagagcctaagggcagccacctccagcatggagcagtacagagccatggctcag
agtctggaggagtccctggataaagaaaaacaggtaacggagcaggcgcgctcatccatt
gaagctcgtataaaggaggctgagaatcagcaccgtaggctggaggagaagcttctggaa
gcagagaaagacaaaaacaatttagaggaggagaagaggagagctctggccactctagag
gaagagatgaacagtctacggaacagtctcagcagtgcccaggcagatcaccaggcggtg
ctacagcagctggcagtagctgaagcccagcagcagcaagctctacaagacagccaggag
caagctaagatggcagccgaagcacaagataagtatgagcgggagatgatgcttcatgca
gcagacgtggaagctctgcaggctgctaaggctcaggccttgcaggctattgagctcaga
caccagctggatgagagagcccagagggtcagcgctgagctactggaggccagagtctcc
tggggggagcaggagaagatcatcaaggaggagatgtcgaagatggagagccgctatgag
gatttgcagaggcagaataccctcctgcatgagcagattcagacgatgagctgcaagatg
gctgacaagttgcaacatgctgccagtgagagtcctatgaacatctctctaactgaggag
ggcaaatctcaagaccaaatccttgaaattctcaggtttgtgcgacgggagaaggagatt
gcagagtctcgttttgagattgcccaaggggagagtttgcgttatcgcctgagggtggag
cacctcgaacgcgaactgaaggagatgcaggacagcttgagtgctgcaaaggaaaggatg
caggtgacagcaaagaccttgtctcagcatgatgagctgatgaagaagacggaaactatg
agcatcctgatggagactaacaagatgctgagagaggagaaggacaagatgatgcaagaa
ctgcagcaaacccaagctaaggtacaaaagctggagtcagacatcatgccactgcagcag
gccaacactgagctgagtgaaaagagcggcatgctgcaagcggagaagaagttattggaa
gaagagatcaagcgctggaaagctcggacccagcatttggtaacccagcaaaaagattcc
gatccggagaaggaggcccatgtcaaacgcattctgcagctcacagaggacagcaccaga
cttaaagcagagattctcaggagcaataatctaacgacctctctgcaaagccagatacag
aacttgcgtgacaatgttagtaagataactgatgaggggaatagtctgaagaaggaagta
gagaacaagaaccaagaactccaggagaaggggcgaactattacccaggtcaagaagatt
ggacgccgctacaagactcagtatgatgaactcaaggtggaacatgacaagttggtagcc
gaggctgcagcaggtccatcccaagaagaggaggctcgtcaagcctcggttcaagagctg
cagagcctcaaagattctctgcacgaggccgaagccaagactagagagttagaaggacag
ctggagaacatcaacaaggttgttacagagcgcgagactgaagggcgtaatgcccaggaa
cagtcctccaggctgcaggcagagctgactaggctaaggcaggagctgcaagataaagct
tctcaggaggacacgctgagacagcagatgactgagaaggaggagaagaccaggaaggcc
attgtttatgctaagcagaagatcaaccagctcatgagcaccaaagaccagctgcagaag
gaaaatgaggagctaaaacaacagcgtgaggagctggaggtgcgtgtgagcgctctcaag
tctcaatacgagggccgcctgagtcgacaggagagagaactgcgagacctgcgaggccaa
caagagagacaagagcagagagacgagccacctgaagcaggtcccagcaagacccaggaa
cagcagaggagcacagaacagagacagatcagtctgaagacaaccccagcagcagacagg
ggcagtgccagcacatctgagccgccaactgccaacattaaaccaacacctgtggctaca
ggcagcaagcaacctgtcaatccggggaacaaacccactccaagagcaagcatcaggcca
atgattaccccagctactgtacccaccccaacacccacagctactgtcatgcccaccaca
caggtggagacccaggaagccatgcagtctactgaaggcccaccagtggagcatgtcact
gtgtacggcagtgccagcggttcggtgcgctccgccagccccaatgtccagaccacttta
gcaagccccatgctgactgtgcagcagacccagacacaggcaacagcatttgtccaaccc
actcagcaacagagcatgacccatgcagagccagctaatcaggagccatcacctgtggtc
attgaggcaacccctagctcgcaggtggaatggccttcaacctcctccacttcctctgtg
tttgggactgtttcagcaacgccaggtacctcctccatgtccaaaaggcctcgagaggaa
gaggaaagcgccaccatggtcactgacacagagtccacccaggaggagaactccagggct
cctatacctaagaagctgcgcatcatccaaagagtgggtccagaggaggaggttctggtg
gaggacagtgctgaggctgagggggttgtaccaacagacagtcaagatggtgcagaagca
agccagacagaggagtttccagtactggaggaaggagatgatggtgcagcctcccagtcc
gtcacaatggaccaagaggttaccctgacccaaagtgaaacacctgaacagcagcagcac
gaagtgattgtcatagtaacagacacagagagtgaggaggaccaggaagaggaggatgaa
gaggaagaagatcaggactacgatgaggaggaggaggaggaggaagaggaagatgaggag
gaggaagatgaagaggatgaggaggaagacgacggagagatgggggaagaaggagaggac
agtaacgaggggagcagagacggcaacgaggcttacgaaggagacgacccagagggagct
gatgtaaccgacccgggcacagagacagaggagagtttgggggcgtctgactccacccag
aggccagcagattcccagacacacagctttgaggggagtacaatggagacatactctaca
gaacaacctataacaagctctggtacacggatgccccagtcaccgcggagaccaacacat
cagctggcccctcgcctgaacattgccccaacatcagaactgggaccacctgctcaggtt
cagcgtatgcctgttcgtcgtcagtcagtgggcagagtccctcagctcacttctggggtg
ccgggcagttctcagcacttctttgatgatgatgacagaatggttcccagcactcccact
ctggtggtgccacaccgctcagacggttttgaccaggccattcattctccccaagttgcc
ggtgtgcctcgcttcaggtttggtccctcagacgacatgccacagccttgttcctcctcg
cactctgacctgggacagctcgcgtcacaaggaggtctcggaatgtatgaaagccccttg
ttcctagcaactcaacaagaggagtctggtggacgcaacgttcccaccacaccgtcacaa
gttacaacaccagtaacaatcttctcagaggtggcacagtctgacatcgctgagcactcc
tcccagtcagttcccacggtgagcacgtccacaccaggcctgtcagcagcagccgctaca
ggggaggatagagacgacgtcttcctggagccagacactgatgggtccagtggagaagtg
tcagtagatcctttggtctcgcagggagatatagaggagccaggccagcaatctgccaag
gccagccttccctccaccagccaggagccctcctctagctctgcagatacaagcagtgct
ccacctagaccctctagactcggacacagcaggcagctgcagcgctggccagaacaccgc
ggcggccgtatgaagagaggaggtcagggatttccttctcgaggtgtgcatgggagacga
tttgcgagatga
DBGET
integrated database retrieval system
