Etheostoma cragini (Arkansas darter): 117949855
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Entry
117949855 CDS
T07493
Symbol
sned1
Name
(RefSeq) LOW QUALITY PROTEIN: sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117949855 (sned1)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117949855 (sned1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
Fn3_Dep-1_3rd
EGF_3
cEGF
EGF_Teneurin
EGF_MSP1_1
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
117949855
NCBI-ProteinID:
XP_034736298
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All DBs
Position
9:22502766..22527702
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AA seq
1381 aa
AA seq
DB search
MVLVLQALLPCFCTLLSLDLLPGVELAVPLEDFYPFGQDKGDSQTISQDDGGSGLVEISV
AFPFFGDRHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGRVFY
RESQEPSVLRRASGDVRTYFSELPNFNATWVLICTWHQVTFFGGNSLTPVNTFQVVLITD
GELSFTIFQYNNITWTTGMHASSGGNLAGLGGIAAQAGFNAGDGKRYFNIPGSHTADVVN
LEGTTNVGYPGKWVFRIDDANVEVGGCNNSASVCPHLRPCLNGGQCIDDCITGNPSFTCS
CLAGFTGRQCQIDVDECVSFPCQNGGTCEDQINSFICHCPPGYTGIECQTDIDECKDRPC
LNDALCVQGAGSFTCVCEPGYTGVLCETDINECESQPCLNGGDCIDQVANFTCICPVAFN
GAVCETDLEVLQDNSTEAENQTALCEEEDCKKHQICEYTVLGIYNCTCAPGFYGDECEEE
CLCQNGGVCVDINGTCECPPGYTGLYCQFEVTQTPCSNNRPCPDGGPCLEYGGAYLCTCQ
TSGAELDHKDFYPYVQPQSVCDSSPCLNGGYCYERDGGYTCECKYGYWGKHCEKVRLNTC
ASGPCRNGGSCKEEAGSYRCVCPYRFTGKHCEVGKPDPCSSSPCLNGGTCFHYIGKYKCE
CTEAFSGRHCEISRSSVPSTAVLGCGLPPQVKNAEVQFSLTTPGSMAVYICHSGFTPVPR
ATQSICGIQGDWSQPPICEGLXHTWTHILNKRCRNSMHLCTYVVPMYMCVLPSDINECLS
VPCKHGGTCEDQAGSYMCHCSQGFKGQNCEIEQDGCETDPCLNGGVCRGYRRNYLCVCKD
GFFGDQCQMLENPCVLQPCGNRGLCRSDKRGNYNCVCRVGHTGKDCEKDLLPPSGLHVLR
VEENEVELRWDEPDPSHSLISGFIVTYGPLGWSNHKTDFLERQQSTHVMRGLVPGQLYNI
STFSIKRNANNNDNSQPATALIRTRPRRVEQLQVVNVSSSQVWLSWLVHHAAVSRVHVSL
LPSDGSEARTAVLNTSTTEHTFSSLLPGQMYTVDVLTQSGIRPDEFPSTSHSAGPLQFWT
RPLPPQNLSLSHVTTNSALITWSRHPRNVPDGFVVNVTRGLNTRSRFLPSGKLGSYTLRE
LTPGQHYYVALTSVKSTEQEQIHSIPQHVAFTTLPMGARSGRRERPTGTGPGTQVGRILP
PSQPQDLGGTTETEELHRYTELIDGRGKITAKFIQLPRKAVRHRAKPDPPIRLEKMEETT
NKISLALQIQEEGLRTKPELPQDCRSLPCQNEGTCVNGGDSFICNCAAGFKGGQCELLCQ
RVPHPCTRLYSETKSVPVWQGGLCHYLYKRTYKVQQDVCYREICEPMPPKKSQSRRTGIQ
Q
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcaagccctgctgccctgcttctgcaccctgctctccctggacctg
ctgcctggggtggaactcgctgtgcccttggaggacttctacccctttggccaggacaag
ggggactcccagaccatctctcaggacgacggaggctccgggctcgtggaaatctctgta
gctttccccttctttggagacaggcacacaggactctatgttaacaacaatggcctcgtt
tctttcctgagggaggtgtctcagttcacacctgtggcttttccaattgccggggataga
agggttgtggctccgttctgggcagatgtggacaaccgtcgtgcagggagggtcttctac
agagagagccaggagccctccgtcctgaggagggcttcaggtgatgtcaggacgtacttt
tcagaattgcccaacttcaacgcaacttgggtcctcatctgtacatggcaccaagttact
ttctttggaggcaactccctcacgccggtaaatactttccaagtggtgctcattacagat
ggcgagctttccttcactatattccagtacaataacatcacttggaccactggcatgcat
gccagcagtggaggaaacctggctgggctgggaggaattgcagcgcaggcaggtttcaat
gctggtgatggcaagcgttatttcaacatccccggctctcatacagctgatgtggtgaac
cttgagggaaccaccaacgtgggctaccccggcaaatgggtcttccgtatagatgatgca
aatgtggaagtaggtggctgcaataactcagcatctgtgtgcccacacctgcgaccatgt
ctgaacggaggccagtgcattgatgactgtataacaggcaacccctccttcacttgctcc
tgcttggctggcttcaccggccgacaatgccagattgatgttgatgagtgtgtctccttt
ccctgccagaacggagggacatgtgaagaccagattaatagtttcatctgtcactgtcct
cctggatacactggcattgagtgtcaaacagacattgacgagtgcaaagacagaccatgc
ctcaacgacgcgttgtgtgtgcagggcgctggcagtttcacctgtgtttgtgaaccgggt
tacactggtgtcctgtgtgagacagacataaacgaatgtgagtcccagccctgtctgaat
ggaggagattgcatcgatcaggtggccaatttcacctgtatttgtcccgttgccttcaat
ggagcagtctgcgagacagacttggaggtgcttcaggacaattcaactgaggcagaaaac
caaacagccttgtgtgaagaggaagattgcaagaagcatcagatttgtgaatacaccgtc
ttgggaatctacaactgtacatgtgctccaggcttctatggtgacgagtgtgaagaggaa
tgtctttgccagaatgggggtgtctgtgtggacatcaatgggacttgtgaatgtcctcca
ggctacacaggactctactgtcagtttgaagtaacccagacgccatgcagcaacaacagg
ccgtgtcctgatggaggtccttgtttggagtatggaggagcctacctgtgtacatgccag
actagtggagcagagctagatcataaagacttctacccctatgtacagccccaatcggtc
tgcgactcctctccgtgtctgaatgggggctactgctacgagcgggatggaggctacacc
tgcgaatgcaaatacggatattggggaaagcattgtgaaaaagttagactcaatacatgt
gcttctggtccctgccgcaatggaggctcttgtaaggaagaagctgggagctacagatgt
gtttgtccttacagattcactggaaaacactgtgaagtgggaaagccagacccctgttcc
tccagcccctgtcttaatggggggacatgttttcactacataggaaagtacaaatgtgaa
tgcacggaggccttcagcggcaggcactgtgaaataagcaggagctcagtaccaagcact
gcagtccttggctgtgggctgcctccacaagtgaagaacgcagaggtccagttctcctta
acaacaccaggctccatggctgtatatatatgccactcaggcttcacgcctgtgcccaga
gccacccagagcatctgtggtattcagggggactggagccagccccccatttgtgagggt
ctgtaacacacgtggacacacattctgaacaaaagatgtagaaattcaatgcacctgtgc
acatacgtagttcctatgtatatgtgtgttttgccatcagacataaatgaatgcctgtca
gtaccctgcaagcacggggggacatgtgaggaccaggctggctcctacatgtgtcactgt
tctcaaggtttcaaaggccagaactgtgaaatagagcaggacgggtgtgaaaccgacccc
tgtctaaatggaggtgtgtgtcggggttacagacggaattatttatgcgtgtgcaaggac
ggcttctttggggaccagtgccagatgttggagaatccttgtgtactgcaaccttgtgga
aaccgtggcctctgcaggagtgacaagagagggaactacaactgtgtttgcagagtagga
cacacaggaaaagactgtgagaaagacctgttgcctccttctggtcttcatgtgttgcgt
gtggaggagaacgaggttgaactgcgctgggatgagccggatccctcacacagcctgatc
agcgggttcattgtcacttatggtcccctgggctggagcaatcacaaaacagattttttg
gaaaggcagcagtccacccacgtcatgcgaggcctggtgcccggccagctgtacaacatc
tccaccttctccatcaagcgcaatgccaacaacaatgacaacagccagcctgccacagca
ctgatacgcaccagacctcggagggtggagcagctgcaggtggtcaatgtgtcctcctct
caggtttggctgagctggctggttcatcatgcagcagtcagcagggtgcacgtgtctctg
ttgccttcagatggcagtgaggctcgcactgccgtgctcaacacaagcaccactgagcat
accttcagttcattactccctggccagatgtacacagtggatgtgttgactcaaagtgga
atcagaccagatgaatttccctccaccagccactcagctggtcccctgcaattctggaca
aggcctctcccgccacagaacctctccctgtcacatgtgaccactaactcagcactgatc
acctggagccgccacccgagaaacgtcccagatggctttgtggtcaatgtgacccgaggg
ttgaacaccaggagtcgcttcctgcccagtgggaaattaggatcatatactctgcgtgaa
ctgacaccaggacagcactactacgtggctctcacatctgtgaaaagcacggagcaggaa
cagatccacagcatacctcaacacgtagccttcactaccttgccaatgggggcaagatca
gggagaagagagaggccaaccgggactggaccggggactcaggttggacgcatacttccc
ccatctcagcctcaggacctgggaggcacaacagaaacagaggaattgcacagatacaca
gagctcattgacggaaggggaaagataacagccaagttcattcagttgcctcgaaaagcc
gttcgacatcgtgctaaacctgacccaccaattagattagagaagatggaagaaacaaca
aacaaaatcagccttgcactgcagattcaagaagaaggtttaagaactaagcctgagttg
ccacaggactgtcgcagtctgccctgccagaacgagggcacatgtgtgaatggaggcgac
tccttcatctgcaactgtgcagcggggttcaagggcggacagtgtgaactgttgtgccag
cgagtgcctcacccctgtacccgtctctactctgaaacgaagagcgtgcctgtctggcag
ggtggattgtgccactacctgtacaaaaggacatataaagtacagcaggatgtttgttat
cgagagatttgtgaacccatgcctccaaagaaaagtcagagcagaagaacaggcatacaa
caataa
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