Etheostoma cragini (Arkansas darter): 117949961
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Entry
117949961 CDS
T07493
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117949961 (ddx10)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117949961 (ddx10)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
90S particles
Helicases
117949961 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
PAS_11
Motif
Other DBs
NCBI-GeneID:
117949961
NCBI-ProteinID:
XP_034736464
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All DBs
Position
9:complement(26757537..26761751)
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AA seq
836 aa
AA seq
DB search
MEKKGTNSVGKKRKPVKMKDGTDPVKNFEKWKKKYNNTKAQVKRERPQKKPEWQVEREYI
DRLVSRYGDINANEAVRFSDFPISKKTLLGLQGAQYRQPTEIQRQTIGFALLGKDVLGAA
KTGSGKTLAFLIPVLECLYRQQWSSMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAG
LVIGGKDLKTESEKIHRTNIVICTPGRLLQHMDETAAFHASDLHMLVLDEADRILDMGFA
DTLNAIVENLPKSRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQSYV
VCELHQKVNMLYSFIRSHLKKKLIVFFACCKEVQYLFRVLCRLRPGMPVLALHGKQQQMK
RVEVYNDFLRKQNAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEGG
EALLLLLPSEEKGMVGQLQEKKVPITKIQVNPDKLQSVQQKLQAFLAQEKEQKERAQRCF
VSYLRSVYLMKNKEVFDVFKLQIQEYAVSLGLAVAPRVRFLSKAKAQRAEKDGQSEEDEE
LRSFKARLKGNAPPEESPSSESEDLGEDEESGSEAEVDQAKICLLGADDDEDEDDLRDLD
LLTVKKKDVFSLTAGEESLEEPTEDSRKKSEKETKFTEAKKALKRNFQVNTKVAFSEEGE
AVQLWPPVQRAATADEEEEEGVSGINMEKARERLQREDQEFDKHEYSRKVKAKHREKRLK
AKAARREASKQHGNKSDSEEEDEVVAYLANHSEDEFDPSTLPDPDKLHSEEEEDEEEITA
AKRQHSSDSSDEDEKQVPVGKRKKVRQQNDEPTALDTGLSLAEDEELVLHLLGGRS
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaaggcacaaactctgtcgggaagaaacgtaaaccagtgaagatgaaagac
ggcacagaccccgtcaaaaacttcgagaaatggaagaaaaaatacaacaatacgaaagca
caagtgaagagagagcgaccgcagaagaagcccgaatggcaggtcgagcgggagtacatc
gacaggctcgttagcaggtacggtgacattaacgccaatgaggctgttaggttctccgac
ttcccaatttcaaagaaaaccttgttaggtttgcagggggctcagtacagacagcccacg
gagatccagagacagactatcggcttcgctttgctcgggaaagatgtcctcggcgcggct
aagactggctccgggaagacgttagcctttctcatcccggtgctggagtgtctctatcgc
cagcagtggagctccatggacggcctcggcgctctcatcatatcccccaccagagagctc
gcctaccagaccttcgaagtcctccgcaaggtgggcaagaaccacgagttctccgcgggg
ctcgtcatcggcgggaaggacctcaagaccgaatcggagaagatccaccgcaccaacatc
gtcatctgcacgccgggccgcctgctccagcacatggacgagacggccgccttccacgcc
tccgacctccacatgctggtcctggacgaggcggaccgcatcctggacatggggtttgcc
gacacgctcaacgccattgtggagaacctgcccaagtcccggcagacgctgctgttctcc
gccacgcagaccaagtcggtcaaagacctggcgcggctcagcctcaaagacccggagtac
gtgtgggttcacgagaaggccaagttcagcacgccggccaccctggagcagagctacgtg
gtgtgtgagctccaccagaaagtcaacatgctgtactcgtttatcaggagccacctgaag
aagaagctcatagtcttcttcgcttgctgcaaggaggtgcagtacctgttccgggtccta
tgccgcctcagaccgggcatgcccgtcttggctctgcatggcaagcagcagcagatgaag
agagtggaggtctacaatgacttcctcagaaagcagaacgctgtgctctttgccactgac
atagccgccagaggcctggacttccccgccgtcaactgggtgctgcagtttgactgtccc
gaggacgcagacacctacatccacagggtgggccggacggcccggtacaaggaggggggg
gaggccttactgctgctgcttccctcagaggagaagggcatggtcggccagctgcaagag
aagaaagttccaatcactaagatccaggtgaaccccgacaaactgcagagtgttcaacag
aagctgcaggccttcctggcccaggagaaggagcagaaggagagagctcagcggtgtttt
gtctcctacctgcgctccgtctacctcatgaagaacaaagaggtgtttgacgtctttaaa
ctccagattcaggagtacgcggtctctctgggcctcgccgtggctccgagggtgcgcttc
cttagtaaagccaaggcccagagggctgagaaagatggccagtctgaagaagacgaagag
ctgaggagctttaaggctcggctaaaaggaaacgctcctcctgaggaaagtccgagctcg
gagtcggaagatttgggcgaggacgaggaaagtgggagtgaagcagaggtggatcaggcc
aagatttgtctcctgggtgcagatgacgacgaggatgaagatgatctgagagacttggac
ctgctgacagtaaaaaaaaaggacgtcttcagtctgacagcgggcgaagaaagtctcgaa
gaacccacagaggactccagaaagaaatcggaaaaggagacaaagttcacagaagccaaa
aaggccctcaagaggaacttccaagtcaacaccaaagtggctttcagcgaagagggcgag
gccgtgcagctgtggcctccggtccagcgggcagcgacagcggacgaggaagaagaggag
ggggtttcgggtatcaacatggagaaggccagggagaggctgcagcgcgaggaccaggag
tttgacaagcacgagtacagccggaaagtgaaagccaagcacagggagaagaggctgaag
gcgaaggcagccaggagggaggcgagcaagcaacacggcaacaagtctgactcggaggag
gaggacgaggtggtggcttacctggccaatcacagcgaagacgagtttgaccccagcacc
ctgccggaccctgacaaactgcactcggaggaagaggaggatgaggaggagataactgca
gccaaacggcagcacagcagtgacagcagcgatgaggacgagaagcaggtcccagtgggg
aagaggaagaaagtgaggcaacagaatgacgagcccacagccctggacactggtctctcc
ctggccgaagacgaggagttagtcttacatctgctgggagggcgaagttag
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