Etheostoma cragini (Arkansas darter): 117950013
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Entry
117950013 CDS
T07493
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117950013
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117950013
Ion channels [BR:
ecra04040
]
Ligand-gated channels
Serotonin (5-HT3)
117950013
SSDB
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117950013
NCBI-ProteinID:
XP_034736546
LinkDB
All DBs
Position
9:11605313..11611573
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AA seq
458 aa
AA seq
DB search
MFSLLAPCSSIMLSCSRPDPPSLLQALEPVFNMKSIRPVVNVSTPTNVSIDFLLFGILGV
DEKAQLLKTYIWQKIKWRNEFVRWDPEQCGSSWITIPRNLLWVPDIVINEFMEKNSAPFV
PYSYLFSNGFVFDEQPVKVISSCMLDIYTFPFDVQTCCLSFNSYLLSMSAMPIGLSSTAE
DIFTFSKELMTTKGEWELVGLTTKTYMLPHMEDELYQEIRFYVSVRRRATLYVVNLLIPS
CFLITVDLFSFLLPPQTVDRSSFKMTLILGYTVFLLLMNDLLPITGNTIPLMNVFLSLCL
ALMVASLLETILITNLICGSAHSSPVPHWVQVFVLHILGRLVRLPPKPRDLDGTVIQNSS
AQEMKVSSLVAEDREPPEQKGMRTLDEEKALQELRSLSRDLQAVRFQVEQQLGGSQSSEE
WIQVGFIIDRLLFLLYILFISVSFFTIIIVWVRSYHTS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttgttagctccatgcagttccatcatgctgagctgctctcgacctgacccg
ccttccctcctccaggcactcgaaccagtcttcaacatgaaatccatccgacctgtcgtg
aatgtttcaacccccaccaacgtcagcattgacttccttctgtttggcattttgggggtg
gatgaaaaggcccagctcctgaaaacgtatatctggcaaaaaataaaatggagaaatgag
tttgtcaggtgggacccagaacagtgtggttcttcatggattacaattccaaggaatctg
ctctgggtaccagatattgttatcaatgaatttatggagaagaactccgctccatttgtc
ccatacagctatctgttttctaatggcttcgtgtttgatgaacagcctgtcaaagtgatc
agctcctgcatgctcgacatctacacgtttccgtttgatgtccagacctgctgtttaagc
ttcaactcctacttactctctatgagtgctatgccaattggcctctcatcaactgcagag
gatatatttacattctctaaagaattgatgacaaccaagggtgagtgggaactagttgga
ctcacaacgaagacatacatgctaccgcatatggaggacgagctgtaccaagagattcgc
ttctatgtgtcagtgcggcgccgggctaccctctatgtggtgaacctgctgatccccagc
tgcttcctcatcacagtggacctcttcagcttcctgctgcctccccagactgtggaccgg
tcctccttcaagatgaccctcatcctgggctacaccgtcttcctgctcctcatgaacgac
ctgctgcctattactggaaacaccatacctctcatgaacgtgttcctgagtctttgcctg
gctctgatggtggcaagtctactggagactatcctcatcacaaacctgatatgtggctct
gctcactcctctcctgtccctcactgggtccaagtgtttgttcttcacatcctcggccgc
cttgtacggcttcctccaaagcccagagatcttgacggcacggtcatccaaaattcttct
gcacaagaaatgaaagtctcctctctggtggcggaggacagagagcctccagaacagaag
gggatgaggacactggatgaggaaaaggccctacaagagctgaggagcctgagcagagac
ctccaggccgtccgctttcaggtagagcaacagctgggcggaagccagagctcagaggag
tggatccaggtgggtttcatcatagaccgcctgttgttcctcctctacatcctcttcata
tcagtcagcttctttaccatcatcattgtctgggtgcggtcataccacacatcctga
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