Etheostoma cragini (Arkansas darter): 117950026
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Entry
117950026 CDS
T07493
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117950026 (fxr1)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117950026 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
117950026 (fxr1)
mRNA cycle factors
Stress granule specific factors
117950026 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
117950026
NCBI-ProteinID:
XP_034736572
LinkDB
All DBs
Position
9:4308137..4319907
Genome browser
AA seq
764 aa
AA seq
DB search
MQELPLQPSNFFSPDASRSTCRPDILCVSNMEELVVEVRGSNGAYYKGVVKDIHDDSLTI
AFENNWQPERQVPFNDVRMPPPADAKKEIGEGEEVEILSRANDQEPCGWWLAKVRMMKGA
FYVIEYAACDATYNEIVTFERLRPVNTNKPITKNSFHKCTVPVPQDLQEACQNENAHKDF
KKAVGACRISYCPETSQLLIVSTNETTVKRVSLLSDMHLRSIRTKLLLMSRNHEATKHLE
TSRQLVSSFQEEFMVRTDLMGLAIGSHGSNIQQARKVQGVTAIDLDEETGTFRIYGETAE
AVKKARNYLEFLEDSVQVPRALVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNDNKQPRQE
LTQGMVPFTFVGTKESIGNVQVLLEYHISYLNEMVELLAEGQQLEEELRQIVDYTQGSSL
ARFRISNTSHNGCDVDEVEQLRLERMQIDEQLRQITQGHRPGDREKGERGEIGGFNTDNS
ANASSASLHGSRSYNGRGRGRRGHGYSTGYGTNSEQSNASETDSERREELSDWSLAVEDQ
ERYRERERGSRPQRDGRRRPGPGRGRGGPGGRGRGGRGGYNSSAGPRDHEDNHAYGAAET
NTETDQTADTDASESNLPANRRRRSRRRRTDEDTTLMDGMSESDNASMSENGIDDSEAKP
QRRNRSRRRHIRLPEERQPVTVADYISRAESQSRQMTTTKDTKKNKDLGQVDTIAEDSPP
SAPATTNGSNNDAAISKGSNASVASAKIAYKGDSNPQPVVNGLS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttacctctccagccttcaaacttcttctctcccgatgcctcaaggagcacc
tgtcgtcccgacatcctttgcgtgtccaatatggaagaactggtggtggaggtccgtggc
tccaacggggcttattacaagggcgttgtcaaagacatccacgatgactctctcaccatt
gcctttgagaacaattggcagccagagcgccaggtgcccttcaatgacgtcaggatgcca
ccgcctgctgatgccaagaaggagattggagagggcgaggaggtggagatcctctctaga
gccaatgaccaggagccatgtggttggtggctggctaaagtccgcatgatgaagggagct
ttctatgtgattgagtacgcagcctgtgatgcaacctacaatgagatagtgacctttgag
cgtctgcgtccagtcaacactaacaagcccatcaccaagaactcctttcacaagtgcact
gtccctgttcctcaggatctacaagaagcgtgccagaatgagaacgcgcataaagacttt
aagaaagccgtgggagcgtgtcgcatctcatactgccccgagaccagccaactactgatt
gtgtctaccaatgagacgacagtgaaacgtgtgtctttgctgagtgacatgcacctgcgc
agcatcaggaccaagctgctgctaatgtcacgcaaccacgaggccacaaaacacctggag
acctccaggcagctggtgtcgtccttccaggaggagttcatggtgagaacagatctgatg
ggcctggccatcggcagccatggcagcaacatccagcaagcacggaaagttcagggtgtc
actgccattgacctcgacgaggagactgggaccttcaggatttatggagagacagcagaa
gcagtaaagaaggccaggaactacctggagtttttggaggactctgtccaggtgcccagg
gctctcgttggcaaagtgattggtaagaacggtaaggtcatccaggagattgtggataag
tccggtgtggtgagggtcaggatcgaaggagacaatgacaacaagcagccccgacaggaa
ttgacacagggaatggtcccattcacctttgtaggtactaaggagagtattggcaatgtt
caggtcttgctggagtaccacatctcctacctcaatgagatggtggagcttcttgcggaa
ggccagcagctagaggaagagctgaggcagattgtggattatacacagggaagcagccta
gcaagattcagaataagcaacacaagtcacaatggatgcgatgtagatgaggttgagcag
cttcgtctggagaggatgcagattgatgaacagttacgtcagataacccagggtcaccgc
ccaggagaccgagagaaaggagaaagaggggaaataggagggtttaatacagataacagt
gccaatgcctcctctgcctctttacatggcagtcgctcctacaacggtcgagggcgtggg
cgccgaggccatggctacagcactggatatggcacaaattccgagcagtccaacgcctct
gagacagattcggagcgcagggaagagctcagtgactggtctcttgctgtagaggaccag
gaaaggtacagagagagggagagaggctcaagaccacagagagatggccgcaggaggcct
ggacccggtagaggtcgaggagggcccggaggacgggggagaggaggaagaggaggatac
aacagctctgcagggcctcgggaccatgaggataaccatgcctatggagccgctgagaca
aacaccgagacagaccagacagctgatacagatgctagcgagtccaatttgccagcgaac
cgccgcaggagatctcgacggcgcagaacagacgaggacaccactctgatggatggcatg
agcgagtcagacaacgcctccatgagtgaaaatggaatagatgactcagaagctaaacct
cagcgacgtaaccgtagtcgacgtcgccacatccgcctgcctgaggagaggcagccagtg
acagtggctgactacatatcccgggctgaatctcagagcagacagatgacgaccaccaag
gacaccaagaaaaacaaggatttgggtcaggtggataccattgctgaggacagcccaccg
tctgccccagcaaccaccaatgggtctaacaacgatgctgccatcagtaaagggagcaat
gcttctgtagcttccgccaaaatcgcctacaagggggactctaacccacaacctgttgtt
aacggactgtcctag
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