Etheostoma cragini (Arkansas darter): 117950035
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Entry
117950035 CDS
T07493
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117950035 (sox2)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117950035 (sox2)
BRITE hierarchy
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Cohesin
Motif
Other DBs
NCBI-GeneID:
117950035
NCBI-ProteinID:
XP_034736597
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All DBs
Position
9:4445845..4448135
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AA seq
320 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGSGNTNTSGNGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLSPGGNGMGAGVGVGAGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQLSY
QHPGLNAHNPSQMQSMHRYDMSALQYNSMTSSQSYMNGSPTYSMSYSQQTTPGMTTLGSM
GPSSVVKSESSSSSPPVVTSSSHRAGPGCQSGDLRDMISMYLPGAEVSDQTAQTRLHMSG
HYQSTVPGTTINGTLPLTHM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagcccccagctccccagaccaacacggggggc
tcgggcaacaccaacacgtctggcaacggccccaaccagaaaaacagtccggagcgggtc
aagagacccatgaacgcgttcatggtgtggtcccggggccagaggaggaagatggcccag
gaaaatcccaaaatgcacaactcggagataagcaagagactgggcgcagagtggaaactt
ctgtcggaaagcgagaagagacctttcatcgacgaagccaagaggctccgggccctgcac
atgaaggagcatccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaagtacaccttgcccggcgggctgctgtctcccggagggaacgggatgggagct
ggggtcggggtgggggccgggctgggcggtggggtgaaccagcggatggacagctacgcg
gcgcacatgaacggctggaccaacggcggctacggcatgatgcaagaccagctgagctac
cagcacccggggctgaacgcgcacaacccgagccagatgcagtccatgcaccgctacgac
atgagcgccctgcagtacaacagcatgaccagctcccaaagctatatgaacggctccccg
acatactccatgtcctattcccagcaaaccacgccggggatgaccaccctgggctccatg
gggccctcctcggtggtgaagtccgagtcgagcagctccagcccgcctgtcgtcacctcg
tcttcccaccgggccgggccgggctgccaaagcggagatctgagagacatgatcagcatg
tacctccccggggcggaggtcagcgatcagaccgcccagaccaggctacacatgtccggg
cactaccagagcaccgtgcccgggacgacgatcaacggcacgttgcccttaacacacatg
taa
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