Etheostoma cragini (Arkansas darter): 117950082
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Entry
117950082 CDS
T07493
Name
(RefSeq) sex comb on midleg-like protein 2 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117950082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117950082
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
117950082
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
117950082
NCBI-ProteinID:
XP_034736678
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Position
9:23795775..23805016
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AA seq
706 aa
AA seq
DB search
MGKTTLKDQKDVKREKPGRMVPLSGTTHATTKDAFSWEEYLKETSSLPAPPGCFRQARVP
PSNDFKVGMKIEAHDPRNSTSVCIATVMGLTGVRLRLRLDGSDNSNDFWRLVDSSDIQPI
GTCEKNGDMLQPPLGFRMNASSWPMFLLRTLNGAEMAPALAFKKEPLRPPQNHFKSGMKL
EAVDKKNPYLICPATIGEVRGDEVFIMFDGWRGAFDYWCKYDSRDIFPVGWCSLTKHSLQ
PPGNSVTLPKNLQNLPASPSKPSRRSMQSPYRLPNPLPPLPVRKGVRGRRPKSETIALLK
AVAEAAAAQNGTVPENTQLGPRPHKKRGPKPGSKRKPKLLQSPAQLPSIQVPHESPPSLN
SVVSTVCVYVNKHGNCSPHLNRKQMQHLPDHFGPGPVNAVLQQVVQSCVDCAYQPKVLLS
ALQTHSGGGEIVRVRTDGGVCMVKLPSASSASFVLRFLETMCRHLQCDNLFSSQPFSHYT
AYDRTKSAHPCSCVSVKEEALDAPSLARGSKRSLSGVSPTYAAPLSPKHLRTEAHPSEAE
TLPHQENNLIKEQRYMDSASNSMTPRPQTVRSSSEYHAQASSPYHPGKAMRRLSSNPAEL
SSTQPHRRVEAASSTTGPEALVSERESLPLPSKNPSSWSIEEVMQFVRGADPTALAPHAE
LFRKHEIDGKALMLLRSDMIMKYMGLKLGPALKICHHIERLKQGKL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaactacactaaaagatcagaaagacgttaaaagagagaaaccaggaagaatg
gttcctctatcaggtacaacccatgcaacaactaaagatgctttcagctgggaagaatat
ctaaaagaaacgtcttctttacctgctccaccaggctgttttcgtcaggctagagtcccg
ccctccaacgacttcaaggtgggaatgaagattgaagcccatgacccgcgcaattccact
tcagtttgtattgccaccgtgatgggcttaactggggttcgtctgcgtctccgtctggac
ggaagtgacaacagcaatgacttctggaggctcgtagactcctcggatatccagcctatt
ggcacttgcgagaagaacggagacatgctgcagccaccgctgggatttcggatgaatgcc
tcctcatggcccatgtttctgttgaggactttaaatggagccgagatggcgccagcactt
gcctttaaaaaggaacctctgaggcccccccagaaccacttcaagtctggcatgaagctg
gaggccgtggacaagaagaacccgtacctcatctgccccgctaccattggggaagtgagg
ggcgatgaggtcttcatcatgttcgatgggtggcggggtgcctttgattactggtgcaag
tatgactcccgggacatcttccctgtgggctggtgctccctcacgaagcacagcctccag
ccgccaggcaacagtgttaccctgccaaagaacctgcagaaccttccggcgtcaccctcc
aagcctagcaggcgttccatgcagtccccctacagactccccaaccctctgccccctttg
cctgtcaggaagggggtaagaggccgtcggcccaagagtgagaccatcgctctactcaaa
gctgtggccgaagcagccgctgctcaaaacggaacggtacctgagaacacacagctcgga
ccccggccccataagaagagaggccccaagcctggaagcaagcggaagcccaagctgctc
caaagcccggcgcagctgcccagcatccaggttccacatgaaagcccccccagcctcaac
tctgtggtttcaacagtgtgtgtttatgtaaataagcacggaaactgtagtccccacctg
aacaggaagcagatgcagcatctgccagaccactttggcccggggccagtgaacgctgtg
ctccagcaggtggtccagtcatgtgtagactgcgcataccagcctaaagtcctcctcagt
gctctgcagactcattcaggaggaggagagattgtccgagtgaggacagatggtggagtg
tgcatggtcaaactcccatcagcctccagtgcttcctttgtgctgcggttcttggagact
atgtgtcgtcacctgcaatgtgacaacctgttcagcagccagccgttcagccactacact
gcttatgacaggaccaagtcagcccatccttgttcctgtgtttcagtgaaagaagaggcg
ttggatgcgccatctctggctcgggggagtaaacggagtctctctggagtctccccaaca
tatgcggcccctctgtcacctaaacatttacgtaccgaagctcacccttcagaagcagag
accctgccccatcaagagaacaacctaataaaggagcaacgctacatggactcagcctcc
aactccatgacccctcggccccaaacagtgcgcagctcctcagagtaccacgctcaggcc
agcagcccgtaccacccgggcaaagccatgcgccgtctctcctccaaccccgccgagctc
agctccacacagcctcacagacgggtcgaagcagccagctccaccacaggccctgaggca
ttggtgtctgagcgggagagtttgccgctgcccagtaaaaacccctcctcctggtccatt
gaagaggtcatgcagtttgtgaggggtgctgacccaacagcgttagccccacatgctgaa
ctattcagaaaacacgagattgacggaaaagctctgatgctgctacggagcgacatgatc
atgaagtacatgggtctgaaactggggcctgcactgaagatatgccatcacatagagagg
ctgaaacaaggcaaactgtaa
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