Etheostoma cragini (Arkansas darter): 117950134
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Entry
117950134 CDS
T07493
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
ecra04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117950134
04020 Calcium signaling pathway
117950134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117950134
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117950134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117950134
NCBI-ProteinID:
XP_034736755
LinkDB
All DBs
Position
9:14825385..14918172
Genome browser
AA seq
2547 aa
AA seq
DB search
MLEPGSCSVSSQSLTMGHNDLGLPRAPSGLECPGEGLGIGAICGSSIPRHHILYSSPTDC
ETWQKHHAELAEGSSLLSESHSLLEPRSLSTSHDPLCFPHMSGQAPPLHPNRLGLSLDVA
STSEVGGGMLGVDGDLAASPNVMKRRRGGLIEQRDIVKAHQAHKIHSTPQARRKEWEMAR
FGDEVPGLLSPGDGGSDRNRNRDGAAVSTGGLSPAFKQTKAQRARTMALYNPIPVRENCF
TVNRSLFIFGEDNVIRKYAKKIIEWPPFEYMILTTIIANCIVLALEQHLPGEDKTPMSKK
LEKTEPYFIGMFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHMNIS
VDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFY
SGKLHYTCTPQPGILENETVDSSEYEVPCGVRQCPAKYTCGDTWIGPNDGITQFDNILFA
VLTVFQCITMEGWTTVLYNTDDALGPNWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKER
ERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDALRSLPEWST
GGAYVLKRATTIKKRGMDVVHRGQSGEEQHSDISSVGIPMARASIRSAKRGPTAYFHRKE
RLLRISIRRVVKTHTFYWTVLGLVALNTLCVAIVHHNQPHWLSHFLYYAEFLFLALFLTE
MFLKMYSLGPRLYFHSSFNRFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKI
TKYWASLRNLVVSLMNSMKSIISLIFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTF
PAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAV
DNLANAQELTKDEEEAEAAFNQKHALQKAKEVGPLSSFMSSEGSRRRRPYLYRKRAIHRS
RPTYSCSLDEGSIREGRPPPPLNPSTSFMSRRERRTRMTMSVWEQRTSQLRRHRQMSSRE
ILFSSPNEEKDGPPASAQAQHGHPQSLHRKAMEHTLSGSLKHLREPLASPSKNQALGSSM
SVDMALDAALSGHIPELPVVLVPESLDPTNVPLSDASVSVAIPEPPESDSITESRKLGVK
PSQNTVSERRSPRLNGERQHRAVKKFRPPDNLDTMTPEMGGHGGIRGRRVLHHCDHPSGA
RSQGSLPSGNGRHFGSRSVSRERRRNPGNLVEKEAETKKVDEVSKPDESRQDDRSGGDTD
PPEKQSHTGDQCLKKQEEPPQQSAPSPPVIPESNKEEKEIEQDQDKCELSSSVIIEVPNV
QSSLELSTISVNIKDPETSKPEEAEETKPVNTETPDSMFIFKPDNPVRRACHYVVNLRYF
EMSILLVIAASSIALAAEDPVATSSNWNKVLRYFDYVFTGVFTFEMIIKMIDQGLLLHDG
SYFRDLWNILDFIVVVGALVAFALSNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKL
KAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKDCQGYYID
YGKDKKEVKRRDWKRHEFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSHGN
RMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAIGAKP
LTRYMPQNRHTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEAVLKHLNT
AFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQFVDTFNMSFLKLF
RAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEET
HITQHNNFKTFSGALMLLFRSATGESWQEIMLSCLGGQKCEMDTSLPPAVPTSDQEGGCG
SDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAA
CGRIHYNDMYEMLTNMSPPLGLGKKCPSKVAYKRLVLMNMPVDDDMSVHFTSTLMALIRT
ALEVKIARGGEDRNQMDLDLQKEIGVIWPHLSQKTLDVLVPIHKASDMTIGKIYAAMMIM
DYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPPEILCNAKSLSFLRHSAGSALTRGGFL
ALSPISPQEMFLQPLSRSGEEKEEEDDGDYRSPYHPYHHPHHQHHHLQTLVPDVVEYNQV
MQQARQDATVIKSPQRTASIRASSMPRLAFDPLPGMSADSKLIKRSFSTIGDQCVNGLWQ
EQHSLERVSPDGSYRPRQRSYRAPRVNHKETSSHERGRSKERRHLLSPDVSRCNSEERSY
DPLCERTRSRSPSEGRTHTLQRQVNTTGSPAHSASDSGTPRNRRQLPQTPSRPRPFISYS
PLVCQAHISPAPTASSEGQTQPQDGAGGSTENLWRADKEGGPRTGGQGSFGVQVLGPSNP
SPHRYISEPYLPFHDDGSGGEAGDGQETLTFETAIATSLGRANAISSAPQLRHSWQVPNG
HFRKHLGQANPAQAGELLSDTDEDDRC
NT seq
7644 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaccgggctcctgttcggttagctctcagtctctgacaatgggccacaatgat
ttggggctacctagagccccatcagggttggagtgtccaggggaaggtctgggcatcggg
gcgatatgtggtagcagcattccgaggcaccacatcctttactcgtccccgacggactgt
gagacctggcagaagcatcatgcagagctcgctgaagggtcaagcctgttgtctgagtcc
cattccctgttggagccccgaagtctctcaactagccatgaccccctctgcttcccacac
atgtctggccaggctccccctctacatcctaaccgtcttggcctctctcttgatgtggcc
tcgacttctgaagtcggagggggaatgctgggggtggatggagatttggcggccagtccc
aacgtgatgaagagacgtcggggcggcctgattgagcagagagacattgttaaagcccac
caggctcataagattcacagcacaccacaagcacgacgcaaggagtgggaaatggcccgg
tttggagacgaggtcccgggcttgttgagcccaggggatggagggtccgatcgcaaccgg
aaccgcgatggggcggccgtgtccacaggtggcctctccccagcctttaagcagaccaaa
gcgcagcgtgcacgcaccatggccttgtacaacccaatcccggtcagggagaactgcttc
accgtcaacaggtccctcttcatctttggtgaagacaacgtgatcaggaagtacgcaaag
aaaatcattgagtggcctccatttgaatacatgatcctcaccaccatcatcgccaactgt
attgtcttggctctggagcagcaccttcctggagaggacaaaacgcccatgtccaagaaa
ctggagaagacagagccctacttcattgggatgttctgttttgaggctgggataaagatc
atcgccctgggttttgtttttcataaaggctcctacctcaggaacggatggaacgtcatg
gacttcattgtggtcctcagtgggatccttgctgcagcaggggcacatatgaacatctca
gtggacctgaggaccctgagggcggtgcgagtgctccgacccctcaaactggtctcaggc
atccccagtctccagattgtcctgaagtccataatgaaagccatggttcctctgctgcag
atcggcctgctactcttttttgccatcctcatgtttgccatcattggcctggagttttac
agcggcaaactgcactacacctgcacgccacagcctggaatactggaaaacgaaacagtg
gactcctctgagtacgaggtcccgtgtggcgtgcgtcagtgtcctgccaaatacacttgc
ggcgatacttggattggccccaatgacggcatcactcagtttgacaacatcctgtttgct
gtcctcactgtcttccagtgcatcaccatggagggatggaccactgtactctacaatacc
gatgatgccttgggtcccaactggaactggctctacttcatccccctcatcatcatcggc
tctttctttgtcctgaacctggtgctgggagtcctttctggggaatttgccaaggagagg
gagagggtggaaaaccgcagggccttcatgaaactgagacgccaacagcagattgagaga
gagctcaacggctaccgggcctggatcgacagagcagaggaagtgatgctcgcagaggag
aataagaattcaggaccttctgccctcgatgctctcaggagcctcccagagtggagtaca
ggtggtgcttatgtgttaaagagagccaccaccatcaagaagagagggatggatgtggtg
catcgaggtcaatcaggggaggaacaacacagtgacatctcctctgtgggcatccccatg
gccagagcaagtatcaggagtgccaagcgaggtccaacagcgtattttcatcgcaaggag
cgtctcctgcgcatctccatccgccgcgtggtgaagacacacactttctactggacagta
ctgggcctagtggctctcaacacgctgtgtgtggccattgttcaccacaaccagccccac
tggctgtcccacttcctctactatgcagagttcctgttcctcgctctgtttctgactgag
atgtttctgaagatgtacagtttggggccgcgtctctacttccactcctccttcaaccgc
tttgactgcagtgtgatcgttggcagcatctttgaagtgctgtgggggttcttcaggcct
ggcacttcctttggcatcagtgtcctgcgtgctctccgtctgctaagaatcttcaagatc
acaaagtattgggcatctctgagaaacctggtcgtctctctgatgaactccatgaagtcc
atcatctccctcatcttcctcctctttctcttcatcgtcgtctttgctctccttggcatg
cagctcttcggtggcaggttcatctttgaagactacaccccaacaaactttgacacattt
cctgcagcaatcatgaccgtctttcagatcctgacaggtgaggattggaacgaggtgatg
tacaacggtattcgctctcaaggaggagtgaagtctggcatgtggtcctctatctacttt
atagtgctaacactgtttggaaactacacactgctgaatgtcttcttggctattgctgtg
gataaccttgccaatgcacaagaacttactaaggatgaagaggaagcagaggcagcgttc
aaccagaagcatgctctccagaaggcaaaggaggtcggaccgttgtcgtccttcatgtct
tcagagggaagccggaggaggcggccctacctgtacaggaaaagagccatccatcgcagc
cggcctacctactcatgctccctggacgagggcagcatcagggagggccgcccaccccca
ccactcaacccctctacctctttcatgtccaggagagagagaagaacaaggatgaccatg
tcagtgtgggaacagaggactagccagctgcggagacaccgccagatgtccagccgagag
atcctgttcagcagtcccaacgaggagaaggacgggcctcctgcttcagcccaggcccaa
catggacatccccagtcactgcaccgcaaggccatggagcacacactgtccgggagtttg
aagcacctgagggaacccttagcctccccatccaagaatcaggctttaggctcctccatg
tctgtggatatggccctggatgccgccctctctggccacataccagaactcccagtggtt
ctggtaccagaatctttggatcctacaaacgtgcccctttctgatgcttctgtgtctgtg
gccataccagaacctcctgagtccgactccattacagagagcagaaaactgggcgtaaaa
ccgagtcaaaacactgtcagcgagcgtcggagccccagattgaatggcgagcgtcaacac
agggcagtaaagaagttcaggccaccggataaccttgacacaatgactcctgagatggga
ggtcatggtgggatcaggggcagaagggtgctacatcactgtgaccatcccagtggggcc
agaagtcaagggtcattgccatcggggaatggaaggcactttgggagtcgctcggtcagc
agagagaggaggaggaatccggggaacttggtggagaaggaggcagagacaaaaaaggtg
gacgaggtgtccaaacctgatgagagcagacaggatgacaggagtggaggagacactgac
ccaccagaaaagcagagccacactggtgaccagtgtcttaagaagcaggaagaacctcct
cagcaatcagccccgtctcctcctgtcatcccagagagcaacaaagaagaaaaggagata
gagcaggaccaggacaaatgtgagcttagctccagtgttatcatcgaggtgcccaacgtt
cagtcatctttagagctctccaccatctcagtcaacatcaaggatcctgaaacctccaaa
ccagaggaggcagaggagacaaagcctgtcaacactgaaaccccagacagcatgttcatc
ttcaaacctgacaacccggttcgtcgagcgtgtcactacgtggtgaacctcaggtacttt
gaaatgtccatcctgctggtcatagctgctagtagtatagcactggctgctgaggaccct
gtagccacctcctctaactggaataaggttctgcggtattttgattatgtgttcaccgga
gtctttacatttgaaatgattataaagatgattgaccagggtctgctcctccatgacggc
tcctacttcagagacctgtggaacatccttgactttatagtcgtggtgggagcattggtg
gccttcgccctctccaatgtgatgggaaataacaaaggacgggacattaagaccatcaag
tctctaagagtgttgcgtgtcctcagaccgctaaagaccatcaagagacttcctaaactc
aaggcggtgtttgactgtgtagtgacgtctctgaaaaacgtcttcaacatcctgatcgtc
tacaagcttttcatgttcatctttgccgtcatcgctgtgcagctctttaaggggaagttt
ttctactgtacagacagttccaaggacacagaaaaggattgccagggttactacattgac
tatgggaaggataagaaagaggtgaagaggagagactggaagagacacgagtttcactat
gacaacgtcatctgggctctactcactctcttcactgtttccactggagagggatggcct
caggttctgcagcactcagtggatgtaacagaggaggacaggggtccgagccacggcaac
aggatggagatgtctatcttctatgtcatctactttgttgtctttcctttcttctttgta
aacatcttcgtggctctcatcatcatcaccttccaagaacagggcgataagatgatggag
gagtgcagcttggaaaagaatgagagggcgtgcatagactttgccatcggtgccaagccc
ctgacgcgttacatgccccagaaccggcacacattccaataccgtctgtggcattttgtg
gtgtcaccctcttttgagtacaccgtcctggccatgatcgctctcaacaccattgtactt
atgatgaagtattactctgccccgccagcctacgaggccgtactgaagcatctaaacaca
gctttcactgttctcttctctgttgagtgcgtcctcaagatcatggcctttgggtttttg
aactactttcgagacacatggaacatttttgacttcatcactgttttgggcagcatcaca
gagattgtggtagacttgcagtttgttgatacgttcaacatgagtttcttgaagctgttc
cgagcagctcgactgatcaaactactccgacaaggttacaccatccgcattcttctgtgg
accttcgtccagtccttcaaggctttgccctatgtctgcctgctcattgccatgctcttc
ttcatctacgccatcattggcatgcaggtgtttgggaacattaagctaaatgaggagact
cacattacgcagcacaacaacttcaagaccttctctggtgctctgatgctgctgttcagg
agtgccacaggggagtcatggcaggagatcatgttgtcgtgtctggggggacagaagtgt
gagatggacacctcgcttcccccagcagtaccaacatctgaccaggaggggggctgtggc
tccgacttcgcatatttctactttgtctcgttcatcttcttcagctccttcctgatgctg
aacctgtttgtggctgtgatcatggataactttgagtatctgacaagagactcgtccatc
ttgggtcctcaccacctggatgagtttgtccggatctggggggagtatgaccgtgccgcc
tgtggtcgtatccattacaatgacatgtatgagatgttgaccaacatgtcgccaccgcta
ggcctgggcaagaaatgcccctccaaggtggcatataagagactagtcttgatgaacatg
cctgtggacgatgacatgtctgttcacttcacctccaccctcatggccctaattcgcacc
gccctggaggtcaagatagccagaggaggggaggatagaaatcagatggacttggactta
cagaaggagatcggtgtcatctggcctcatctctctcagaagactttggacgtgctggtt
cccattcacaaagccagtgacatgacaattgggaagatttatgccgccatgatgatcatg
gactattacaagcagagcaaggccaagaagctccgacagcaactggaggaacagaaacat
gctcctatgttccagcgtatggacgcctcctctctgcctccagaaatcctatgcaatgcc
aaatccctttcattcctcaggcacagtgccggatctgctctcaccagaggaggttttcta
gcactcagccctatctctccacaagagatgttcctgcagccgctgtcgcgctccggggag
gagaaggaggaggaggatgacggcgactatcgttcaccctaccacccttaccatcaccca
catcaccagcaccatcatttacaaacactggtgccagacgtagtggaatataatcaagtg
atgcagcaggccaggcaggacgcaacagttattaaatcacctcagcgcacagcatccatc
agagcttcctccatgcccagactggcttttgatccactgcctgggatgtcagcagacagt
aagctgataaagcgctccttctctaccatcggagaccagtgtgtgaacggcctctggcag
gagcagcactctctggagagagtcagtcctgatggctcatacaggcctcgtcagaggagc
tacagagctcctagagtcaaccacaaagaaacaagcagtcatgagagagggcgatctaag
gaacggcgccacctactgtctcctgacgtgtcccgctgcaactctgaggagcgcagctac
gatccattgtgtgaaagaacaaggtcccgttcacctagcgaaggacgcacacacacctta
cagagacaggtaaacacaacaggcagccctgctcattcagcctcagactccggcacacct
cgtaatcgacgccagctgccacagacaccctcccggcctcggccattcatctcctactcc
cctctggtctgccaagcccacatctcaccagcaccaacagcctcctctgagggacagacc
cagcctcaggatggcgctggtggctccactgagaacttgtggagggctgataaggagggt
ggcccccgaactggaggtcaggggtcatttggagtacaggtgttaggaccgagcaaccca
tctcctcaccgctacatctcagagccctacctcccattccatgatgacggaagcggtgga
gaggcaggagacgggcaggagacgcttacttttgagactgccatagcaaccagcctagga
cgggccaacgccataagctccgctcctcaactcagacactcctggcaggttcctaatggt
catttccgaaagcacttgggccaagcgaatccagctcaagccggcgagctgctaagtgac
acagacgaggacgaccgctgctaa
DBGET
integrated database retrieval system
