Etheostoma cragini (Arkansas darter): 117950137
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Entry
117950137 CDS
T07493
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117950137 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117950137 (usp24)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117950137 (usp24)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117950137 (usp24)
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117950137 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
UBA
DUF3517
UBA_RAD5A
UBA_7
Motif
Other DBs
NCBI-GeneID:
117950137
NCBI-ProteinID:
XP_034736770
LinkDB
All DBs
Position
9:complement(25378424..25421621)
Genome browser
AA seq
2633 aa
AA seq
DB search
METEEEQHITTLLCMGFPDPDVIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGVGSTGDGENSGRTGTGGFDPPPAYHDVVDSEQSNDENGNCSEGSMEFPTTNLYELESR
VFTDHWSIPYKREESLGKCLIASTCLARHGLADADENCKRFIDRCMPEAFKKLLTSSAVH
KWGTEIHEGIYNMLMLLVELVAERLKQDPVPVNLMGVLTMAFNPDNEYHFKNRMKVCQRN
WAEVFGEEANMFAVSPSNTYQKEPHGWLVDLVNRFGELGGFTAIQTKLNADEIEIACVSA
LVQPLGVGAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPDLLSAIKLLCM
RFQRELVAVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDKLL
DWLVENSVLSIALEGNIDQAQYCERIKGIIELLGSKLSLDELSKIWKIQAGQSSTVIENI
HTIIAAAAVKFSFDQLTHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSETTTGKVLE
VLWELAHLPTLPTSLVQQALEEHLGILSDAYAVKETVKRSYIIKCIEDIKKTHTQDDSKG
SDTQSSFLTGTWGKKKANSLVKASQQSSPQAVWVVPALRQLHEITRSFIKQTYQKQDKSI
IQDLKKNFEIVKLITGSLVCCHRLAVTAAGNNGLSGSVLVDGRYTYQEYLDSHLRFLAFF
LQEASLYLVWNRAKELWECLVSGPDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATAMPTVATSVQSPSRYRGGFGSTKLVIIERLLLLAERYVITIEDMYSVPRTILPHG
ASFNGHPVTLHITYESSKDTFSLETHSNETIGSIRWKIAEHLSCPVDNVQIFANDSVLTM
NRDQKLLSQLGFSDEQSLTVKSSGTGTPSGSSESSASASSSSSSAVFNSAYALEQEKSLP
GVVMALVCNVFEMLYQLANLDETRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQ
VHQMRSGHMKTLFQGTGSRSPSMASKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVL
SSKLMPTSDDEMAKTSSKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQ
LARFLLIGQSMPAALDDDVIRDGEALSSRPFRNAGRAGRQLSLCGTPEKSSYRQMSLSER
SSIRVEEIIPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSPQPIRENHSSLL
PQGVRTRVSSTGSNCSSSSEGETTPTALHAGICVRQQCVSIKDTIIAREALSLLVTCLQL
RCQQLSSFYNLPSVNDFIIDVLLGSPSGEIRRVACDQLYTLSQSDTSAFAEVQKPNLFLI
SVILTAQLPLWSPTSIMRGVNQRLLSQCTEYFDLRCQLLDDLTTSEMEVLKVSAATMLED
EISWLDNFEPSWSSEMETSEADNILLAGHLRLIKTLLSLCGNEKEHLGPSLIQQLLDDFL
FRASRIIINSSNPTPSPAPSHDFHPKCSTASSRLAAYEVLVMLTDSSLSNLRLITKELMS
MHHQSDPSLCKEFDYLPPVESRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAFLSIE
DDTDQPEESVFYQVQSLFGHLMESKLQYYIPENFWKIFKMWNKELYVREQQDAYEFFTSL
VDQLDEHLKKMGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEIS
LDQFVRGEVLEGSNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYD
EQIRFPWVLNMEPYTVSGMARQDCSGEGSEGRGDGTSGGSPRKKVTISENYELVGVVVHS
GQAHAGHYYSFIKDRRGSVRGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNP
YPDVRRRYWNAYMLFYQKISDQNSPVLPKKSRVSIMRQEAEDLTLSAPSSPDISPQSSPR
PPRANNDRLTLLTRLVRKGEKKGLFVEKMPASIYQMVRDENLKFMRNRDVYNSDYFNFTL
SLASVNATKLKHPDYQPMAKESLQLAVHFLFHTYLHTKKKLRVDTEEWMATVDVLLSKSC
EACQWMVQYLVGPEGREITRVCLLECSVREVRVVVASILEKTLESALHFGDPGLDNLTDT
MLSLLDKDVPENVKNCAQYFGLFSNFAQRGCGPCQLLLKHSAYRRMLIFLLGPNRQNNQN
RRWSPAQAREFLHLHNTLALMTLHSDLNAQRTQAPGEFKLRVSCVPASTKLLPLHADILA
SLFTPEGQPYLQEVMFAMRELSGPLSLLIEMVTYTAYCNEPFSLGVLQLLKTQLETAPPH
ELKNIFQMLQELLVMEEPLQTQRLKYAFESEKGLLALMHESNNVDSRRCYQCVKFLVTLA
QKCAPAKDYFKDLSGHWSWAVQWLQKKMTEHYWTPQSNVSNETSTNKTFQRTISAQDTLA
YATALLNEKEQSGSSNGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7902 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaagaggagcagcacatcacgaccctcctgtgcatgggcttcccagacccc
gacgtgatacggaaagcgcttcggttggcaaagaacgacatcaacgaggcagtggcgctc
ctgacaaacgaaagccccggactcggctatggatatgaaccgatggagagtgggcctgcc
cccggcgtgggctcgactggagacggggaaaacagcgggaggactgggacgggagggttt
gaccccccgcccgcataccacgatgtagtggatagcgagcagagcaatgacgagaacggg
aactgctccgagggcagcatggagtttcccaccaccaatctgtacgagctggagagtcga
gtctttaccgaccactggtccataccttacaagagagaggagtccctgggcaagtgtctc
atcgcgtccacctgcctcgcccgccatggtcttgctgacgctgatgagaactgcaagcgc
ttcatagatcggtgcatgccggaggccttcaaaaagttgctaaccagcagtgccgtacac
aaatggggcaccgagattcacgagggaatctacaacatgctcatgttgctggtggagctc
gtagcagagaggctgaagcaggaccccgtacctgtaaatctgatgggagtcctgactatg
gccttcaaccctgataacgagtaccattttaagaaccggatgaaggtctgtcagaggaac
tgggctgaggtttttggagaagaggccaacatgtttgcggtctctcctagcaacacctat
cagaaagagcctcatggttggctggttgatttggtgaatcgatttggagagttgggagga
ttcactgccattcagactaagctcaacgcagatgaaatcgagattgcttgtgtgtcagct
ttggtccagcctctgggagttggtgcagaatacctaaactccagccttgtccagccaatg
cttgatcctgtcatccacaagatgatcacatatgtgcagaacctggaggaaaaggatctt
aaagacaagcgtctggtgagtatcccggacctgctgtcggccatcaagctgctgtgtatg
aggttccagagggagctggttgctgtggtggatgacctgcggctggacacactgctgcgc
atgctcaaaaccccccacttctctaccaagatgaactcgctgaaagaggtgacaaagttg
atagaggagagcacagtgtcgaagacggtgaaaaatgccattgacacagataaacttttg
gactggctggttgagaactcagtcctatcaatagcactggagggtaacattgaccaagct
cagtactgcgagaggattaagggaatcattgagttgcttgggagtaaactgtcgctggac
gaactctccaagatctggaaaatacaggcgggccagtcatcaactgtaatagaaaacatt
catacaatcatcgctgctgctgctgtgaagttcagcttcgatcaactaacccacctcttc
gtcctcatacagaagagctgggaggttgagagtgaccgcgtgaggcagaagctgcttagt
ctgatcgggaggatcggcagagaggctcgctctgaaactacaacaggaaaggtgctggag
gtgctgtgggagctggctcacctccccaccctgcctaccagtctcgttcagcaggcgctg
gaggagcatctggggattctgagtgacgcctacgccgtcaaggagactgtgaaacgcagt
tacatcattaaatgtattgaggacattaagaagactcacactcaggacgactccaaaggc
agcgacactcaaagctcttttcttactggcacttggggcaagaagaaagctaactctttg
gtcaaagcttctcagcagagcagtcctcaggcagtctgggttgttcctgctctccgtcag
ctgcatgagatcacccgttctttcatcaagcagacctatcagaaacaagacaagagcatt
atccaggacttgaagaagaactttgagattgtcaaactgatcaccggatccctcgtgtgc
tgccatcgactggccgtgaccgcggcgggaaataacggcctctctggctcagttttggtg
gacggacgatacacctaccaggagtatctggacagccacctgcgcttcctggccttcttc
ctccaggaggccagcctctacctggtctggaacagggccaaggagctctgggagtgcctg
gtgtctggcccggatgtctgtgaacttgaccgcgagatgtgttttgagtggttcaccaaa
ggacaacatgacctggagagtgacgttcagcagcagctcttcaaggagaagatcctaaaa
ctggagccctacgagatcaccatgaacggtttcaatctatttaagaccttctttgagaac
gtcaatctgtgtgaccatcgcctcaaacgccagggcactcagctgtgtgtggagcgcctt
gacctggcagggatggatttcatctggcgcattgctatggaaacccctgatgaagagata
gccaatgaagcgatccagctcattatcacatatagctacaccaacctcaatcccaaaatg
aagaaggactctgtgtctttgcacaagaagtttatagctgattgttacaagcgactggag
gcagctagctcggccctgggtgggcctactcttactcatgctgttactagggcaactaag
atgctgacggcaactgccatgccgactgtggccacatctgtacaatcaccatccaggtac
agaggggggtttggatccactaagctggtgataatcgaaagactgctgctactggctgaa
cgctacgtcatcactatagaggatatgtactcagttcctcgcactattctacctcacggg
gcctcgttcaatggacaccctgtcactcttcacatcacctatgagtcatccaaagacact
ttcagcttagagacacacagtaatgagacaataggaagtatacggtggaagatagctgag
cacttaagctgtccggtggataacgtccagatctttgccaatgacagcgtgttgaccatg
aatcgggaccagaagctactgtctcagctcggcttcagcgacgagcagagcctgactgtg
aagagctcaggcactggcactccctctggcagctccgagtcgtcggcctccgcctcaagc
agttccagctccgccgtcttcaactctgcctatgccctggagcaggagaagtcactgccc
ggtgtggtgatggctttggtgtgtaatgtgtttgagatgctttaccagctggctaattta
gatgaaaccaggatcactcttcgtgtgaggaagctgctgctgctgataccaacagatcca
gaagtgcaggatgctctagacaactttgttcccaaagaatccagtgtctggagccaccag
gtacatcagatgcgttctggtcatatgaagacactgttccagggtacaggctctcgttcc
ccatccatggcctccaagcagcagcaccagcccagtgctgcatccatcctggagtccctc
ttcagatcctcggccccgggcatgtccaccttcagagtgctgtacaacctggaggtgttg
agttcaaagctcatgccaacgtcggatgatgagatggccaaaaccagcagcaagtccttc
tgtgagaacttccttaaagcaggaggcctcagtctggtggtgaatgttatgcaaagagat
tccatcccctcagaggtggactatgagacaagacaaggagtctactctatttgtcttcag
ttggccaggtttcttctgattggccagagcatgcctgcagcgctggatgatgatgtcatc
agggatggcgaggcgctgtcatctcgtccgttccgaaacgccggacgggcggggcgtcag
ctgtctctttgtggaactccagagaagtcctcctacagacagatgtctctctctgagcgc
tcctccataagagttgaggagatcataccagctgctcgcgtagctattcagaccatggaa
gtgggtgactttacttccaccgtagcctgtttcatgcgcctgacctgggcagctgcagca
ggccgattggatctggttggcagcccacagccaatcagagagaaccacagctcccttctg
ccacagggagtccgcaccagagttagcagtacaggaagtaactgcagctccagcagtgag
ggggagaccactccaacagcattgcatgcagggatatgtgtgaggcagcagtgtgtctct
attaaagatactatcatcgcccgtgaggccctgtccctgttggtcacctgtctgcagttg
cgctgtcagcagctaagttctttttataaccttccctcggtcaatgatttcatcattgat
gttctgctgggatctcccagcggagagatccgacgtgtagcttgcgatcagctctacact
ctgagccagtctgacacttcagccttcgccgaagtccagaaacccaacttgttcctcatc
tcagtcattctcactgctcaactgccattgtggagtcctacatctatcatgagaggggtc
aaccagaggttgctgtctcaatgcacagagtactttgacctaagatgtcagcttttggat
gacctaacaacatccgagatggaggtgttaaaagtgagtgcagccactatgctggaggac
gagatctcttggcttgacaactttgagccaagttggagctctgagatggagaccagcgag
gcggacaacatcctcctggcaggacacctccgactcatcaagaccttgctctcactctgt
ggtaacgagaaggagcatctcgggccatctctgatccagcagttactggatgacttcctg
tttcgcgcctcacgcatcatcatcaacagttcaaaccccacaccctcgccggcccccagc
cacgacttccacccaaagtgcagcacagccagcagcaggctggcagcctatgaggtgctg
gtgatgcttacagacagctctctctccaacctccgactgatcaccaaagagctgatgtcc
atgcatcaccagtctgatccttcactctgcaaggagtttgattacctaccccccgtagag
agccggtctgtctcaggttttgttgggttgaagaacggtggtgccacatgttacatgaat
gctgtgtttcagcagctctacatgcagcccggcctgccagaggctttcctgtccatcgag
gacgacacagatcagccagaagagagcgtcttctaccaagtgcagtctttgtttggccac
ctgatggagagcaaactgcagtactacatacctgagaacttctggaagatcttcaagatg
tggaacaaggagttgtatgtaagagaacagcaggatgcttacgagttcttcactagcctg
gtggatcagctagacgaacatctcaagaaaatgggtcgagagcagatcttcaaaaacaca
tttcagggaatcttctctgaccagaagatttgtaaagactgtcctcaccggtacgagcgt
gaagaaacattcatggctttgaaccttggggtgacatcctgtcaaagcttagagatctca
ttggaccagtttgtcagaggagaggtgctagagggaagcaatgcctactactgtgagaaa
tgcaaggagaagagaaccaccgtaaagagaacatgcatcaaatccctgcccagcgttctc
tgcattcacctcatgcgctttggcttcgactgggaaagcgggcgctccatcaaatatgat
gaacagattaggttcccttgggtgttgaacatggagccttacactgtctctggaatggct
cgtcaagactgcagcggagagggcagcgaggggcggggcgacggaacctcaggtggatca
cccaggaagaaagtcacaatttctgagaactatgaactcgtgggagttgtggtccacagt
ggtcaggcacatgctggccactattactctttcattaaagatagacgtggtagcgttcgt
ggacgttggtacaagttcaacgacaacgtggtagaggagtttgatatgaatgacgaaact
ttggagtatgaatgcttcggtggagagtaccgtcccaaagtttacgaccagtccaaccca
taccctgatgtgcgaaggaggtactggaacgcctacatgttgttctatcagaagatcagt
gaccagaactcgcccgtcctgcccaaaaaaagcagagtcagcatcatgcggcaggaggct
gaggaccttacactgtctgccccgtcctctcctgatatttcgccccagtcctcgcctcgc
ccccccagagccaacaacgaccgcctcaccctcctcacccgcctggtccgcaagggagag
aagaagggcctgtttgtagagaagatgccagccagcatctatcagatggtgagggatgag
aatctcaagttcatgaggaacagagacgtctacaacagcgactacttcaacttcaccctc
tccctggcctccgtcaatgcaacaaagctgaagcatccagactaccagccgatggccaaa
gagagtcttcagctggctgttcacttcctctttcacacctacctgcacaccaaaaagaaa
ctccgggtggacacagaggagtggatggcgaccgtggacgtgttgctgtctaagagctgc
gaagcgtgccagtggatggtgcagtacctggttggaccagagggccgagagatcaccagg
gtttgtctgttagagtgcagtgtaagggaggtgagggtggtggtcgcatccatccttgaa
aagactctggagagcgctctccactttggagacccgggactggacaacctgactgacact
atgctttccttattggacaaagatgttccagagaacgtgaaaaactgcgcacagtacttc
ggcctcttcagtaactttgcacagaggggatgcggtccttgtcagctgttgttgaaacac
tcagcttatcgccggatgctcatcttcctgttgggacccaataggcaaaacaaccagaac
cggcggtggagtccagcacaggctcgagagttccttcacctccacaacacgctggccctc
atgacgctacactctgacctcaacgcccagcggacgcaggctccaggagaatttaaactg
cgagtgagttgcgtcccggcctccactaagctcctccccctccacgcagatatcctggcc
tcacttttcactccagagggacagccttaccttcaagaggtgatgtttgccatgcgcgag
ttgtccggtcccctgtccctcctgatagagatggtgacctacactgcctactgtaacgag
cccttctctctgggcgtgctgcagttgctcaagacccagctggagacggctccacctcac
gagctgaagaacatttttcagatgctgcaggagcttctagtaatggaagaacctctgcaa
acccagagactcaagtatgctttcgagtcagagaaaggcctcttagctttgatgcacgag
agcaacaacgtggacagcaggcgctgctatcagtgtgtgaagttcctggtcacattagcc
cagaagtgtgctcctgccaaggattacttcaaggacttgtctggtcactggagctgggcc
gtacagtggctgcaaaaaaagatgactgaacattactggactccacagagtaatgtctct
aatgagacatccaccaacaaaaccttccagcggactatctctgcgcaggataccttggcc
tacgccaccgcgctgctgaacgagaaggagcagtctggcagcagcaacggctctgacggc
agcccagccaatgaaaacgccgaccgcagcctccgacaggggtcggagtcacccatgatg
ctcggggattcaaagagcgatctggaagatgtagacccatag
DBGET
integrated database retrieval system
