Etheostoma cragini (Arkansas darter): 117950159
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Entry
117950159 CDS
T07493
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117950159 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117950159 (fip1l1a)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117950159 (fip1l1a)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117950159
NCBI-ProteinID:
XP_034736828
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Position
9:24627688..24656520
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AA seq
438 aa
AA seq
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MSSSESDSKDVTEDSDEGQIYQLIYDMIIRDDKEEEKDEVQIPSSCENTPVHLKTDAEWS
AHASAVCSNRPFSNGSEDEATHNTTHTRQMDQEAGNPKGLDTLDNIPGIPVPTASEDKPW
RKAGADISDYFNFGFDEESWNIYSKKQSKIRKANRKLYTKIMGQKEKEASPAPPPSGTPS
TVLTSRQPNATNNANKGRRRSRVRRRRRLSDGEKHSQVTTERSPKEDRFTSYPSSPSNFN
TLFAYVPPPPFLFQPGPLSASLLAALDGGSSKGFDDPSTSGQPCSSGVSSLIPRSTSSKA
GGIDTATECYKRKEKRDKDRYKSREHGRYEDITRGRNRDRVSCSSSHSAEERTRHRDTTE
QGHGRHSLGEKEERHGERRHRDDSEGWQKSSRSSSSRSRRARGEDRDSQSRHKHRKAKRN
RKDKETKMSSADQDRKFK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatcggagtcagactccaaagatgtcaccgaagatagcgacgagggacaaata
tatcaattgatttatgacatgatcatcagagatgacaaggaggaggaaaaggacgaggtt
caaatcccttccagctgtgagaacacaccggtgcatctgaaaactgatgctgaatggagc
gcacatgcatctgcggtgtgctctaacaggccttttagtaatggctcagaggacgaagca
acacacaacaccacccacacaagacaaatggaccaggaagctggtaatccaaagggacta
gacacattggacaatatcccgggaatcccagtaccaacggcttcagaggacaagccatgg
cggaaagctggtgctgacatctcagattactttaactttggttttgatgaagagagctgg
aacatctactctaagaaacagtccaaaatccgtaaagctaatagaaaactatacactaaa
atcatgggccagaaggaaaaggaggcttctcctgctcctcctccgtcaggcaccccctct
actgtactaacttccagacagccaaatgctaccaataatgcaaataaaggacgaaggaga
tccagagtacgaagacgccgacgcctcagtgatggagaaaaacattctcaggtgactact
gagaggtcccccaaggaggatagatttacttcttatccgtcctctccatcaaacttcaat
actctatttgcatatgtccctccaccacctttccttttccaaccaggacccctgtctgcc
tccctgcttgctgctttggatggtggatcctccaaaggctttgatgacccctcaacttca
gggcagccatgttcatcaggtgtatcatcgttaatcccaaggagtacgtcctccaaagct
ggagggattgacactgccacggaatgctacaaacggaaggaaaagcgtgacaaggacaga
tacaaatccagagagcacggccgttatgaagacattactagaggcagaaatagggacagg
gtgagctgttcctcttcacacagtgctgaggagcgaacacggcacagggacactacggag
caagggcacggacgccacagtttaggggaaaaggaagaacggcacggagagaggaggcac
agagacgacagcgaaggatggcaaaaatcatcacgcagcagcagcagcaggagtaggagg
gccagaggtgaggacagagacagtcagagtagacacaaacacaggaaggccaaaagaaat
aggaaggacaaggagaccaagatgtcttctgctgaccaagataggaaatttaaatga
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