Etheostoma cragini (Arkansas darter): 117950219
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Entry
117950219 CDS
T07493
Name
(RefSeq) zinc finger protein GLIS1 isoform X1
KO
K09232
zinc finger protein GLIS1/3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117950219
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
117950219
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
Zap1_zf1
FOXP-CC
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
117950219
NCBI-ProteinID:
XP_034736907
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All DBs
Position
9:17198980..17275569
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AA seq
1013 aa
AA seq
DB search
MQNPSALFGMVSHCQTPTFTDFTGLSLSVYGSKADICTRRAGSAGFGSQICRTSHDTLSQ
MNRAGQKSLGASEEKAHLAAKASRSCLSLPPVQVNGAYCSEKDLDIELGDAEGTMMRCGQ
SLPLLVGAHLGGLYSQSLHCDRPTPDLSLQDGPHQDTRSSSAFQRTLPGASPSLGCGNAN
GARSSLSYPIKQESSMGYRISNTASGGHSTSQAGFPNSRAGQVLGMTRDEMVGAPHVSNS
SSGVCTVSGVGSAVSGETVQPFNNEDGSSPLALSPTGSRHSARLLSASSLRRHCLSLASQ
STAAGSVAATGSPSATGTTSEEINITAIICSSSQMSMVACVNGFRTNLSPSHASSAGFCS
SSSSSSTSPPSNSCSREAPQRPPPHASPQQATLQESCQLSSPATCLLSLSSSSSSSSFSS
VSSVEPEQGQGQSQVLCEERGSMLQGRGAGGTAGGGLGGGGGSDGLGLLMSGALLSGMLH
SGPEAGTILDGGQRSGAALKQEPLDDFSPSEDELFQHHYHHLHHLSGRSGHLCQPHHPSR
PAMPPPYHLHQYVGPSPGGLLHHQNQQTAPTSSLGIKPTSGGPPGSHSAPEREEVGGGAL
VDKQVCRWIDCSAAYEQQEELVRHIEKVHIDQRKGEDFTCFWAGCIRRYKPFNARYKLLI
HMRVHSGEKPNKCMFESCNKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAK
HQRTHLDTKPYACQIPGCTKRYTDPSSLRKHVKIHSAKEQQVRRKIRPCPHLEQDVLSDC
LSMQHLQSSTSSQHLYNGKDGCSPGLGQDIFAGLYPGSSTPHHSASVELLSPNPNPTSVS
TTDLPSRQHRLDRDLGSPHHLSPLAAMDGTRDGVSGPLLSPGLKGTGTPPPPLEKQHVHP
HHKPYSHYHHHQSDNDEYQGSFQSCFHLGDSYRMEQTVSGVHVPGDSHAYTSHQHNGFHM
STSNTGTAGFNLAQEIQGGAGCQFSSSPEESIFFQVGNFDRSLSHMSSVYTET
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccctcagcgctgttcgggatggtcagccactgtcagaccccaacttttaca
gacttcaccggcttgtcgctctccgtgtacggcagcaaggcggacatctgcacgcggcgg
gccgggagcgctggttttggatcgcagatttgccggacttcccatgacaccctgagtcaa
atgaaccgcgccggccagaagagtctcggtgcatccgaagaaaaggcgcatctggcagcc
aaagcttcgcgctcgtgcctctctcttccacccgtgcaagtgaatggtgcctactgctca
gagaaggatttagacattgagctaggggacgctgagggcaccatgatgcgatgtgggcag
agcctgccactactggtgggggctcatttaggggggctttattcccagagcctccactgc
gacagacctacacccgacctcagtctgcaggacggcccccaccaagacaccagatcctcc
tctgccttccagaggaccctgccgggggcctcacccagcctgggctgcggcaatgccaac
ggggctcgctcgtctctctcttacccaatcaaacaggagagctcaatgggctacagaatc
tccaacacagcgtctgggggccacagcacgtcccaggccgggtttccaaacagtagggca
ggccaagtcttggggatgacaagagacgagatggttggagcgcctcatgttagcaacagc
agtagtggcgtatgcacagtgagcggtgtaggtagtgctgtgtcgggggaaacagtgcaa
ccgtttaataatgaagatggctcctccccactggctttgtccccaactggctcccgtcat
tcagcgcggctgctcagtgctagcagtctgaggagacactgcttgtccctggcctcacaa
tccaccgccgctggcagcgttgctgccacaggttccccgtcagctactggcactacttcc
gaggagatcaatatcaccgccatcatctgctcctcctcccagatgtcgatggttgcctgc
gtcaacggtttccgcactaacctctcgcccagccacgccagcagtgccggcttctgctcc
tcttcctcctcctcttctacatccccaccctctaactcctgctctcgggaagccccccag
aggcccccacctcacgccagcccccagcaggccacactacaggagagctgtcagctatcc
tcacctgccacctgcctgctgtccctctcctcctcctcctcgtcctcatccttctcttca
gtgtcatcagtggagccggagcagggccaagggcagagccaggtgctgtgtgaggagcgg
ggctccatgctgcaggggcgtggggctggaggaacagccgggggaggtttgggcggagga
ggaggctcggacgggttggggctactgatgagcggggccctgttgtctgggatgttgcat
tcggggcctgaagccgggacgatcctggacgggggccaaagatcaggggctgccctcaaa
caggagcccctggatgatttttctcccagcgaagatgaactctttcagcaccactatcat
catctccatcacttgagtggtcgtagtgggcacctttgtcagccccaccacccctctcgc
cctgctatgcctccaccctaccacctgcaccaatatgtggggcccagtcctgggggcctg
ctgcaccaccaaaaccagcaaacagcaccaacctcttccctgggaatcaaaccgacctct
ggaggccctcctgggtctcactcagccccagagcgagaagaagtcggaggaggagcactg
gtcgataagcaggtgtgtcgctggattgactgcagtgctgcctacgagcagcaggaggag
cttgtgaggcacatagagaaggtccacattgaccagcgcaaaggtgaggacttcacctgt
ttctgggccggctgcattcgccgctacaagcctttcaacgcccgctacaagctgctcatt
cacatgagagtccactccggagagaagcctaacaagtgtatgtttgagagttgtaacaaa
gcgttttcacgtctggagaacctgaagatccacctgaggagccacacaggagagaagccg
tacctgtgccagcacccaggctgccagaaagctttcagcaactccagcgaccgcgccaag
catcagcgcactcacctggacacgaagccgtacgcatgtcagatccccggctgtaccaag
cgctacacagatcccagctccctacgcaaacatgtaaagatccactcggctaaagagcaa
caggtgcgtagaaagattcggccctgtcctcacctggagcaggacgtcctgagtgactgt
ctttccatgcagcacctgcagagctccacctcctcgcagcacctctacaacggcaaagat
ggctgttctcctggactgggccaagacatcttcgcaggcctgtaccctggctccagcacc
ccccatcatagtgcctcagttgagctcctctcccctaaccccaaccccacctccgtctcc
accacggacctgccctcccgacaacacagactggaccgggaccttggcagtcctcatcac
ctgtccccactggctgccatggacggcacaagagatggggtgtcgggtcccctcctgtct
ccaggcctgaagggaacagggacgccacctcctcctctggagaaacagcatgtccaccct
caccacaagccctactctcactatcaccaccatcagtctgacaacgacgaataccaaggc
agctttcagagctgcttccacctcggagactcttataggatggagcagacggtcagcggt
gtccacgtcccaggggattctcacgcctacacttcccatcagcacaatggcttccacatg
tcaaccagcaacactggcactgcaggctttaacctggcccaggagattcaaggcggcgca
gggtgccagttctcctccagcccagaagagagcattttcttccaggtgggtaactttgac
cgcagcctgagccacatgtcctctgtctacacggagacatag
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