Etheostoma cragini (Arkansas darter): 117950231
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Entry
117950231 CDS
T07493
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117950231 (syde2)
Membrane trafficking [BR:
ecra04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117950231 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C2
Med7
Motif
Other DBs
NCBI-GeneID:
117950231
NCBI-ProteinID:
XP_034736945
LinkDB
All DBs
Position
9:complement(5674720..5720557)
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AA seq
1715 aa
AA seq
DB search
MADPLRRTLLAKLRGKKSKKAATVCGGYGSASAANGGREGKEKVLQTQRDSDEACPVVML
TGLDCTTERMSTYENCVDGAMVQTGGVVVRESRSAERPLERSSGGRVPVNKELLGVSLQR
EVQFGGHVFKEGDRIHQGPKSTAQITLSAGVSLGGPHVQRKHFVSVPRQCSVGDSIGFGD
NSNHDVYRARVESHTGVSKPAEGRVTTADSNGTEPRDGGHSQHMAGTVAAVNEHIATWGI
DNQTLETNSPVCAAPSWLSINMEENIVIKNLESYGPEYAGDIRGTAGGLQSPTFFPTELE
ICDVNMASLCATEESLRYTLDSEDEDYYDNQILPFYETITAKSDIDRAEVAELPRPGQDK
RQADDGNSAQETDRLRNQLKEAYYLLINAMNDINLDVQQFSGGLTELQAPSSCSSHSRDS
LCSRLSAKNIDSDSWSSGGDHSPQQVSDTDSLLLCLSGNPESGFKGRLNSKSMVNLSLTK
IRSTLQRSASDGAIRYPDGHSLCIQAPGTQSPDVSGDKGPTDRGVKATGVDELSEPQVLY
SAVSSNELLQDAGGDEDRGGRLNDSSGSVNSLTGSSDSNADASTNQGRDNKQELTHVRAQ
RDKSVNKGHGVTVNKMQEWMHKGRLLSSEMKQRIEGSSLPRGARKSQDRSCPQGINGVCK
PGVQTSSRGVKSVTAKSPRQQLQQQPAFIENVQTPCAIGREVGRASESLSWQPPLTTITV
SKKRNWLQQSSIGKNNHSTKDELQGMLAAEEEGSHQSPPPPSPSPDHLRPSGGVPSRPAR
LHLPQVNASQAKVSPHPRSVDPAEENDADDEGEIWYNPIPEDDELEMSHRPSVRLLVPPR
AESQRRPSRGGDASHGGRDLGVVGVGSEALGESLSGGLGDGSQGNAVHSTEALNLHRQML
ACKPQEEGGPSTSRATDGPDLPNAVSSPPSSPNPAKKSSSLNWSFPDKIKSPRTVRKISM
KMKKLPELSRKLSVKGTPSSSNSNNGNGSSHLEPRAHSPRNNMSRLESVPHSSGPPRLAA
SGGGQASRNVISRYHLDSSVSTQLSFSKKKSNGSSKSASKGGYLSDGDSPELVAKSGKHG
SSEGKGGKGKEAESGGGNSKLNGTDLDIDAFRHYSFTEQPKCSQFISGLMSLHFYGAEDL
KPPRIDSRDVYCAIQVDSVNKARTALLQCRTTFLDMDHTFNIELENAQHLKLVVFSWEPM
PRRNRVCCHGTVVLPALFRVTRCHQLAVKLEPRGLIYVKLSLMEQWQNSLDGGPDRDREP
QVFGVEAWRVVERENTGLLVPLLISKCINEIEKRGCQVVGLYRLCGSAAVKKELREAFER
DSYAVELSENVYPDVNVITGVLKDYLRELPYPLITKNLYEAVLEAMATRPLRIGAAGCEN
DQADSEHTVSLLDNLPDVERVTLQKLLDHLKLVASCQEVNKMTCQNLAVCFGPVLLSQRQ
EASCHTNRVFIDSEELASALHFKKHIEVLHYLLQLWPVVDPHGRSSSQPPAASLAPASSD
LLTAPPIRRRKERPQVLNLSEAEMAGVLRPRPGRLDSPSNRYAGDWSGCGESYFPCDILL
PPSKEEADYDDVPSEDSEAAEEAQENPEDAEEDKGQMVPSPVSDPAEQEQPRKEEAVKEE
EREEEEEEQEEEEQVESDGSGNGQNIEDKEEERVCDHILPPRLPKEHTYQAYMKIQDISP
VLSNRVNLRDLQESIDTLIGNLERELNKNKVNVGY
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactttattagcgaaactccgggggaagaaatccaagaaa
gcagcgacggtctgcggtggatacggctctgcgtctgcggctaacgggggccgagaaggt
aaagaaaaagttttgcaaacgcagcgagactcggacgaggcttgcccggtagtcatgctc
acaggtctggattgcacgacagagagaatgagtacgtacgagaattgtgttgacggggcc
atggtgcaaacagggggggtcgtagtccgggagagtcgctcagcagagcgtcccctggag
cggagcagcgggggcagggttccggttaacaaggagctcctgggggtctcacttcaaaga
gaagtgcagtttgggggacatgtgttcaaggaaggagataggattcaccaggggcccaaa
tccactgcccaaatcacgttatctgcaggggtttcgcttggtggaccgcatgtccagaga
aaacacttcgtctcggtgccgcggcagtgcagcgtcggggactcaatagggttcggggac
aattcaaatcacgatgtgtaccgagcacgggtagagtcacataccggagtcagtaaacca
gcagagggccgggttactactgctgatagcaatgggacggaacctagagacggaggacac
tcccagcacatggcagggacagtagcggctgttaatgaacacattgccacctgggggatt
gacaaccaaactttggagacaaattcgccagtttgcgcggccccaagctggttgtcaata
aacatggaagaaaacattgtaatcaaaaatctagaaagttatgggcctgagtatgcaggg
gacattagagggacagcaggcggtctgcagagcccgacgtttttccccacagagttagaa
atatgcgacgttaacatggcatccctgtgcgctacagaggagtcacttagatacacttta
gatagtgaagatgaggattattatgataatcaaattctgcctttttatgaaactatcaca
gcaaaaagtgatattgatagagcagaggttgcagagctgccacggcctggtcaagataaa
agacaggctgatgatgggaacagtgcccaggaaacagacaggcttaggaaccagctcaaa
gaagcttattatcttcttatcaatgccatgaatgatatcaatctggatgtccaacagttc
agtggtggtttaactgagctgcaggccccctcctcctgtagtagccactccagggacagc
ttgtgctcgaggttgtctgccaagaacatcgacagtgactcttggtcctcaggaggggac
cacagccctcagcaggtgtctgacactgactcactcctgctttgcctcagtgggaaccct
gagtcaggcttcaagggcaggctgaatagtaagagtatggtaaacctgtccttgaccaag
ataagatccacattacagcgctctgctagtgacggagctatcaggtatccagatggacac
tccctctgtatccaggcccctggaacgcagagtccagacgtcagtggggataaagggccc
acagatagaggggttaaagccacaggagtggatgagctgtcagaacctcaggtgctttac
agtgctgtaagcagtaatgagctgctacaagatgccggcggtgatgaagaccgtggcggg
cggctcaatgacagcagcggctcagtcaacagcctcacgggttcttcagacagcaacgcg
gatgcatcaacaaatcagggtcgcgacaacaagcaggagctgactcatgtccgagcacag
agggacaaatctgtcaacaaggggcacggtgtcactgtcaacaagatgcaagagtggatg
cacaaggggcgtttgctgtcctccgagatgaagcaacgcattgagggctcgtctttgccg
cgtggcgcacgcaaaagccaggaccggtcctgtcctcagggtatcaacggtgtgtgtaaa
ccaggggtccagacgtccagccgaggggttaaatctgtcacggccaagtcaccacggcag
caactgcagcagcagccagcttttattgagaatgtccaaaccccctgtgctattggccgg
gaggtgggcagggccagtgagtcgttgtcatggcagccaccgctcaccaccatcactgtc
tctaagaagcgtaactggctgcagcaaagctccatcgggaagaataatcacagcaccaag
gatgagctgcagggaatgctggcagctgaggaggagggctcccaccagtccccacctcct
cccagtccctctccagaccacctgagaccgtctgggggagttccgtcacggccggcccgc
ctgcacctgcctcaggttaatgccagtcaggccaaggtgtctcctcaccctcgtagtgtg
gacccagctgaggagaatgatgcagatgatgaaggagagatctggtacaacccgatccct
gaggacgatgaactggagatgtctcaccgaccctccgttcggctcctggttccccctcga
gcagagtcccagaggaggcccagcaggggaggggatgcgagtcacggtggcagggacctg
ggggttgtcggcgttgggtcggaggcgctcggggaaagcctcagtggcggtttaggagat
gggagtcaggggaatgctgtacattccacagaggcactaaatctgcacagacagatgctc
gcgtgcaaacctcaggaggagggggggccttccaccagcagagccacagatggtcctgac
ctgcccaatgctgtcagctcccctccttccagcccaaacccagccaagaagagcagctcc
ctcaactggtccttcccagacaagattaagtccccgcgcaccgtaaggaagatctccatg
aagatgaagaagcttccagaactcagccggaaactcagtgtcaaggggaccccgagtagc
agtaacagcaacaacggcaacggaagcagtcacttagagcccagagcccattctccccga
aacaacatgagcaggttggagtctgtcccccattcctccggccctcccagattagctgca
tctgggggagggcaggctagccgtaacgtgatctcacgctaccacctggacagcagtgtg
tccacacagctcagcttcagtaagaagaaaagcaacggcagctcaaagtctgccagtaaa
ggtggctacctcagtgatggtgactcacctgagctggtggccaaatctgggaagcatggc
tcttcagaggggaagggagggaaaggcaaggaggcagagagtggtggcggaaactctaaa
ctcaatggcacagacttagacattgatgctttccgccattacagcttcacagagcagccc
aagtgcagccagtttatctcgggactgatgagcctacacttttatggtgctgaggacctc
aaacctccacgcattgactctcgagatgtctattgcgccattcaagtggactcagttaat
aaagcacgaactgctctcctccaatgtcgaactaccttcctagatatggaccacaccttc
aacattgagctggagaacgcccagcacctaaaactggtggtgttcagttgggagcccatg
ccgagacgcaaccgcgtctgctgccacggcacggtggtactgcctgcactcttccgggtg
acgcgttgccaccagctggcggtgaagctggagccgcgaggcctgatctacgtcaagctc
agcctgatggagcagtggcagaactccctcgatggtgggccagaccgagacagggagccc
caggtgtttggtgtggaggcgtggcgggtggtggagagagagaacacgggactgctggtg
ccgctgcttataagcaagtgcatcaatgagattgaaaagagaggctgccaggtggtgggt
ctctaccgtctgtgtggctctgcagctgtgaagaaggagctacgcgaggcgtttgagaga
gacagctacgccgtggagctgtctgaaaacgtgtatcctgacgttaatgtcatcacaggt
gtactgaaggactacctacgggagctaccctaccctctgatcaccaagaacctgtatgag
gcagtgttggaggccatggccacaaggcctttgcggataggagcagcgggctgcgagaac
gaccaggctgactcggagcacaccgtcagcttgctggacaacctgccagatgtggaaagg
gtgacactgcagaagcttcttgaccacctgaagttggtagcgtcctgccaggaagtgaac
aagatgacatgtcagaaccttgcggtgtgttttggcccggtgctgctcagccagcgtcag
gaggcatcctgccacacaaaccgagtcttcattgactctgaggagctggccagcgcgctg
cacttcaaaaaacacatcgaagtcctgcactacctgctgcagctctggcctgttgtggac
ccacatggccggtcctcctcccagccccctgcagcttctttggctccggcctcatctgac
ctgctgacagctcctcccatacggcggagaaaagagcgcccccaggtcctgaacctctct
gaagcggagatggcgggcgttctgcggcccagaccgggacgcttggacagccccagcaac
cgctatgccggtgactggagcggctgcggagagagctacttcccttgtgatattctgctg
cctcctagcaaagaggaggcggactatgacgacgtgccctccgaggattcagaggcagct
gaggaggcccaggagaatcctgaggatgctgaggaagataagggacagatggttccgagc
cccgtgtctgatcctgctgagcaggagcaacctcggaaagaggaggcggtgaaggaggag
gaaagagaagaagaggaggaggagcaggaggaggaggagcaagtagagagtgatggttcg
ggcaatgggcagaacatagaggacaaggaggaggagagggtgtgcgaccacatccttccc
cctcgtctgcccaaagagcacacctaccaggcttacatgaagatccaggatatcagcccc
gtgctaagcaacagggtcaacctgagagacctgcaggagagcatcgacactctgatagga
aacctggagcgagagctcaacaagaacaaggtcaatgttggatactga
DBGET
integrated database retrieval system
