Etheostoma cragini (Arkansas darter): 117950247
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Entry
117950247 CDS
T07493
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117950247 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117950247 (bbs4)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
117950247 (bbs4)
Cilium and associated proteins [BR:
ecra03037
]
Primary cilia and associated proteins
BBSome
117950247 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_14
TPR_19
ANAPC3
TPR_12
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_9
ARM_TT21_2nd
TPR_15
TPR_Slam
ARM_TT21_4th
PknG_TPR
ARM_TT21_C
ARM_TT21_N
NatA_aux_su
HrpB1_HrpK
SMP
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
117950247
NCBI-ProteinID:
XP_034736974
LinkDB
All DBs
Position
1:complement(10331570..10348327)
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AA seq
545 aa
AA seq
DB search
MATASSVDQPKMADEENATALPVATEAKKRRAPKAPELPIVERRNWLIHQHYIRKDYDTC
KAIIKEQLQETNGMCEYAIYVQALIMRLEGKIQQSLELFQSCAVLNPSSADNLKQVARSL
FFLGKHKAAIEFYNEAARLNEKDWEISHNLGLCYFFIKDFKNAEEHLNIALQINKHDKTF
MMLGKVHLLAGDTDTAIEVYKKGVEFSPENTELLTTLGLLFLQLGKYQKAFEHLGNALTF
DPNNYKAILAAGSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAIS
CLKRAHYMSPFDWKVLYNLGLVHLTMQQYASAFHFLSAAINLKPRMGELYMLLAVALTNL
EDVENATRAYEQAVTFDDSNPLVNLNFAIFLYNHGDKKAALYQYQEMERKVNLLRDSSSN
NEFDPELMDMAQKMGAALQVTEGLVWTKPVKDSNSKPNSSAATKAPGAPLGTNQALGQAM
SSAASYNRNFQGQTGVSKGPSMPLEPEPDVENAPSPPTDPPGSPEPVVSENPKTRTSKRK
SKVEE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcttctagcgttgatcagcccaagatggcggacgaggagaatgccacggcg
ctcccagttgctactgaagccaagaaacgtcgggcacctaaagctccagagcttcccatt
gtggagaggagaaactggctaatccaccagcactatatccgtaaagactatgatacatgt
aaggcgatcatcaaagaacaactgcaggagactaatggaatgtgtgaatatgccatatat
gttcaagcgcttatcatgcgtcttgagggcaagatccaacagtccctggagctgtttcag
agctgtgccgtccttaatcccagcagcgctgacaatctcaagcaagtggccagatcactg
tttttcctgggaaagcataaagcagctattgaattctataatgaagctgcaaggctcaac
gagaaagactgggagatcagtcataatctggggttgtgctatttcttcatcaaagacttc
aaaaatgctgaagagcacctaaacatagctcttcagataaataaacacgacaagaccttc
atgatgcttggaaaggttcatttgctggctggagatactgacacggccatcgaagtgtac
aagaagggagtggaattctctccagagaatactgaacttctgactactcttggcctgctg
tttttacagcttgggaaataccaaaaagcatttgagcaccttggaaatgccctcactttt
gaccccaacaactataaggccatcctggctgcaggcagcatgatgcagacccatggggac
tttgatgtggccatgaacaagtaccgagtggcagcatgtgctgtgcctgagagccccccg
ctctggaacaacatcggcatgtgtttctttggaaaaaagaaatatgtagctgccatcagc
tgcctgaaacgggcccactacatgtctccctttgactggaaagtgttgtacaacctgggt
ctggtccacctgaccatgcagcagtatgcctctgccttccacttcctcagcgcagccatc
aacctgaagccacgtatgggggaactctacatgttgctggcagtggctctgaccaacttg
gaggatgtagagaatgccaccagagcgtatgaacaagctgtgacatttgacgattccaac
cctctggtcaacctgaactttgccatcttcctctataatcatggtgataagaaggcagct
ctgtatcagtatcaggagatggagaggaaagtcaacctacttcgagacagcagtagcaac
aacgaatttgatcctgagctgatggacatggctcaaaagatgggagctgccctgcaggtg
acagagggtctggtgtggactaaaccagtcaaggactccaattccaagccaaactcttca
gcagccaccaaagcccctggtgctccccttggtactaaccaagctctgggccaagccatg
tcttctgctgcgagctacaatagaaacttccaaggtcaaacaggagtttccaaaggcccc
tccatgccccttgagccagaaccggatgtggagaatgcccccagcccacccactgaccct
ccaggctccccagaaccggttgtgtcagagaaccccaaaaccagaacctccaagaggaaa
tccaaggtggaggaatga
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