Etheostoma cragini (Arkansas darter): 117950249
Help
Entry
117950249 CDS
T07493
Symbol
dnajc6
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117950249 (dnajc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117950249 (dnajc6)
03110 Chaperones and folding catalysts [BR:
ecra03110
]
117950249 (dnajc6)
04131 Membrane trafficking [BR:
ecra04131
]
117950249 (dnajc6)
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117950249 (dnajc6)
Chaperones and folding catalysts [BR:
ecra03110
]
Heat shock proteins
HSP40 / DNAJ
117950249 (dnajc6)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
117950249 (dnajc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
117950249
NCBI-ProteinID:
XP_034736976
LinkDB
All DBs
Position
9:7085440..7125764
Genome browser
AA seq
980 aa
AA seq
DB search
MSLLGAYKKKTSYDGYECLQLVDSGGDSFSVGRGSSGGGGGGSVTLAGSRAATLGPKAGP
LREEDCSTMDSSEMDANYGGGLLDMVKGGAGKFFSNFKDNLKDTLKDTSTKVMHQVATYT
KGELDIAYITSRIIVMTYPAESVQIGYQNHVEDIRSFLDSRHADHYTVFNLSQRNYRGAK
FSNRVSECNWPSRQAPSLHNLFAVCKNMHNWLKQNPKNVCVITCSDGRALSGVLVCAMFC
FCHLFNNPVPAMQLLSAKRPGSGLWPSHHRYIGYVCSMVSEKPSLPHSKPLMIKGLTITP
VPCFNKQRNGCRPFCDVLIGETKIFTTSQEYERMREHRVQEGKIAFPLGVSVQGDVIVSV
YHMRSTIGGRLQAKVSNTQIFQIQFHTGFIAPGTTMLKFNKPELDACDSPEKYPQLFHVI
LDVEVEGVDKQKDLTPPWEQFPVKDLNPNVLFSCHQEHQDALAIADEMEGLDLEEPSRPH
GGPDGRGHGEESEPSDDDMLSLSSQRSNASTAPQKPDPSVPMPAASAPAEEMDLLGLDGE
EINCPSSQPPSSVAATTDLLGDLFGGPPQPTSGASSAQSTPQKVVLNTASPCPSPAPSGF
DPFGTGPMPKPQDMMGSFLGPGNVGQPDPFLHAARSPSPTLQPTSLGRSSPVPPATPIVN
IQQLNAKGGWDWNRTATTSTGTGFGMGSRSATTSPTGSVHSTPTHQTQPNTLDPFADLGN
LGGSHGAGSGFSSKPTTPTGAAPSVPPMGSPSRPPPSPQHAEGWQSHTGASFPSWQPGAG
GGGGWPHQGQGPASQPKPSPSHTPMPHTSPQNRPNYNVSFSAMGGGSPSAGCKVQAAMGS
KPKAFNANFDDLLSGQGFAGAKEKKGPRTIAEMRKEEMAKEMDPEKIKILDWIEGKERNI
RSLLSTMHTVLWEGETRWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMI
FMELNDAWSEFDSQGQKPLY
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgggggcctacaagaaaaagaccagttacgatggctatgaatgtttgcag
ttggtcgatagcggcggagatagcttcagtgtcggcagaggaagcagcggcggcggcggc
ggcggcagcgtcacactggcaggctccagagcggccacccttggaccgaaggcaggcccg
ctgagagaggaggactgcagcaccatggacagctcagaaatggatgccaattatggcgga
ggactgttggatatggtgaagggaggagcgggaaagttcttcagcaacttcaaggacaat
ctgaaggacactttgaaagacacctccaccaaggtcatgcatcaggttgccacatacact
aaaggggagctggacattgcctacattacatcacggatcatagtgatgacctaccctgcc
gagtcagtgcagattggctaccagaaccacgtagaggacattcggtccttcctcgacagc
cgccatgctgaccactacactgtctttaatctatcacagcgcaactaccgcggcgccaaa
ttctccaatagggtttcagagtgtaattggccttctcgccaggctcccagcctccacaac
ctgtttgccgtgtgtaagaacatgcacaactggctcaaacagaatcccaagaatgtgtgt
gtcatcacctgctcggatggccgtgctctctctggtgttttggtttgtgccatgttctgc
ttctgccacctcttcaacaacccagttcctgccatgcagctactcagcgccaagagacca
ggttccggtctctggccctcacaccacaggtacataggctatgtgtgtagcatggtgtca
gagaagcccagtctaccccactccaagcccttgatgatcaagggtctcaccataactccg
gtcccctgctttaacaagcagcgcaacggctgtcggcccttctgcgacgtcctcatcgga
gaaacgaagatctttaccacttcacaggagtatgagaggatgagagagcacagggtccaa
gagggtaagattgcttttcctctgggtgtgagtgtgcaaggggacgtcattgtttcagtc
taccacatgaggtcaaccatcggaggacgtctgcaggccaaggtgtccaacacccagatc
ttccagatacagttccacactggcttcattgcgcccggtaccaccatgttaaagtttaac
aaacccgagctggatgcatgtgactctcctgagaagtatccccagcttttccatgtaata
ctggacgtggaggtggagggggtggacaagcaaaaggacctgacgccaccgtgggagcag
ttccccgttaaagacctcaaccctaacgtgctcttctcttgccaccaggagcaccaggac
gcactggcaatcgctgatgagatggagggattggatctggaggagccaagtcggccccac
ggaggtccagacggtcggggccacggggaagagagtgagccctcggatgatgatatgctc
tctctctccagccagcgaagcaacgccagcacggccccccagaaacccgacccttctgtg
cccatgcctgctgcctctgcacccgctgaagaaatggatcttcttggcctcgatggggag
gagatcaactgtccttcatctcagcccccatcttctgtagccgcaaccactgacctccta
ggggacttgttcgggggcccaccccagccaaccagtggggcatcatctgcccagtccaca
ccacagaaagtagtcctaaacactgcctcgccatgtccctctcctgcaccatcaggtttt
gatccctttgggacgggtcccatgcctaagcctcaggacatgatgggttcattccttgga
ccaggtaacgtggggcagcctgaccccttcctgcatgctgcacgctctccatcacccacc
ttgcagcctacaagcttgggccggagttccccggtcccgcccgccaccccaattgtcaac
attcagcagctaaacgcaaagggaggatgggactggaacagaacagctaccacaagcaca
ggaacagggtttggtatgggcagtcggtcagcaactacaagccccacaggctcagtccac
agcacccctacccaccaaacccagccaaacaccctagacccgttcgctgacttaggcaat
cttgggggaagccatggagcaggttctggcttttccagcaaacccaccactcctactgga
gcagccccttccgtacctcccatgggctccccatcgcgacctcctccgtcaccccagcat
gccgaagggtggcagtcccacacaggagccagcttcccctcgtggcagccaggggctgga
ggtggtggcggatggccacaccaaggacagggccctgcctcacagccaaagcccagcccc
agccacacccccatgcctcacacatcgccccagaaccgacccaactacaatgtcagcttc
tctgcaatgggagggggctcgcccagcgcagggtgcaaagtacaggctgccatgggttct
aagcccaaagcctttaatgccaactttgatgacctgctgtctggtcagggctttgctggg
gccaaagagaagaaggggcccaggactatagcagagatgagaaaggaggagatggccaaa
gagatggaccctgagaaaataaagattctggactggatcgaggggaaggagcgtaacatc
cgttctctactgtccaccatgcatactgtgctgtgggagggagagacgcgatggaagcct
gtgggcatggctgacctggttactccagaacaggtcaagaaggtctaccgcaaagctgtc
ctggttgtccacccagataaggcgacaggacagccttatgaacaatatgccaagatgatt
ttcatggaactaaatgacgcctggtcagaatttgatagccaaggacaaaaacccctctac
tga
DBGET
integrated database retrieval system
