Etheostoma cragini (Arkansas darter): 117950420
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Entry
117950420 CDS
T07493
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03030
DNA replication
ecra03410
Base excision repair
ecra03420
Nucleotide excision repair
ecra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117950420 (rfc4)
03410 Base excision repair
117950420 (rfc4)
03420 Nucleotide excision repair
117950420 (rfc4)
03430 Mismatch repair
117950420 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecra03032
]
117950420 (rfc4)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117950420 (rfc4)
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117950420 (rfc4)
DNA replication proteins [BR:
ecra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117950420 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
117950420 (rfc4)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117950420 (rfc4)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117950420 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
117950420 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_11
AAA_22
AAA_24
AAA_assoc_2
AAA_30
DUF815
Mg_chelatase
SLFN-g3_helicase
AAA_14
AAA_19
RuvB_N
ResIII
Kinesin
Gp44_lid
AAA_5
AAA_28
AAA_7
DNAX_ATPase_lid
KH_DUF2096_C
Motif
Other DBs
NCBI-GeneID:
117950420
NCBI-ProteinID:
XP_034737355
LinkDB
All DBs
Position
9:complement(29424316..29449913)
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGATVQTTRSQKDKAAAGQSTEKKAKAIPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPHLYKKRVLELNASDERGIQVVREKVKN
FAQLAVAGTRPDGKQCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANHIQEERLLEICEKESLKYTKESIAELVRVSEGDLRKAITFL
QSAARLNVGNEITDKAVIEIAGVVPPKMIDHLLQICFTGTFEKLEVAVRNMVDDGYAATQ
ILSQLHETIIEQDMSDKQKSAITEKMAVVSKCLSDGADEYLQMLSLCSVIMQHASQNN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggagcaactgttcagacgaccagatctcagaaagacaaggca
gcagcagggcaaagtacagagaagaaagccaaggctattccttgggtagaaaaatacagg
ccaaagtgtgttgatgaggtggcctttcaagaggaggtagtagcagtgctgaagaagtct
ctggaaggagctgatcttcccaacctgctcttctatggccctcctggaacagggaagacc
tcaactatattagctgctgccagagaactttatggtccacacctgtacaaaaagagggtg
ctggagctcaatgcctctgatgaacgaggcatccaggttgtcagagagaaggtcaagaac
tttgctcagctcgccgtggccgggactcgtccagatgggaagcagtgtcctccttttaag
ataatcatcctggatgaggcggactccatgacggcaccggctcaggccgctctaaggcgg
accatggagaaggagtctcgcaccacccgtttctgcctcatctgtaattacatcagcagg
attattgagcctttgacctccagatgttccaagtttcgctttaaacctttagccaatcat
atccaagaagagcgcctgctggagatctgtgagaaggagagcctcaagtacaccaaagag
agtattgcagaattggtgagggtgtctgagggagacctgcggaaagccataaccttcctc
cagagtgctgcgcgacttaacgttggtaacgagatcacagacaaagctgtcattgaaata
gccggggttgtccctcccaagatgattgaccacttgctgcagatatgcttcactggaaca
tttgagaagctagaggttgctgtcaggaacatggtggatgatggctatgcagccacacag
atcctgagtcagctccatgagactatcatagagcaggacatgagtgacaagcagaagtcg
gccattacagagaagatggcggttgtcagtaagtgcctgtcagatggtgcagatgagtac
ctgcagatgttaagtctgtgttcagtcatcatgcagcatgcctcccagaacaactaa
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integrated database retrieval system
