Etheostoma cragini (Arkansas darter): 117950455
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Entry
117950455 CDS
T07493
Symbol
nlgn1
Name
(RefSeq) neuroligin-1
KO
K07378
neuroligin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117950455 (nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117950455 (nlgn1)
Membrane trafficking [BR:
ecra04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117950455 (nlgn1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COesterase
BD-FAE
Abhydrolase_3
Motif
Other DBs
NCBI-GeneID:
117950455
NCBI-ProteinID:
XP_034737406
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Position
9:complement(28909855..29233182)
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AA seq
861 aa
AA seq
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MSQWRHSSRTGSQLLETVKSGNRMMGYIRLKGSLNSGRWVSSLIWLGLLLLQPSPAAVSA
QKLDENDPVVTTTYGKLRGVKKELNNEILGPVVQFLGVPYAAPPTGERRFQPTEPPASWQ
EIRNATHFAPVCPQSIVEGRLPDVMLPVWFTNSIDVVSTYVQDQSEDCLYINIYVPTEDG
PLTKKHTDDLGDSDRTDDEDIRESGSPKPVMVFIHGGSYMEGTGNMFDGSILASYGNVIV
ITVNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWISENIAAFGGDPLRITVFGSGAGAS
CVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARMLARKVGCNLE
DTVELVGCLQRKHYKELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIML
GVNQGEGLKFVELIVDNENGVQANDFDYAVSSFVDDLYGYPEGKDILRETIKFMYTDWAD
RHNPETRRKTLLALFTDHQWVAPAVATADLHSSFGSPTYFYAFYHHCQTEQVPPWADAAH
GDEIPYVFGLPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHT
KPNRFEEVAWTRYNQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHSLNEVTQLIPT
TTKIPSPEATNRTPKTKILATKRPNPSPFPTETQDSHNQPHLVDQRDYSTELSVTIAVGA
SLLFLNILAFAALYYKKDKRRHDVHRRCSPQRSAANDLAHTQEEEIMSLQMKQHSDLDCR
GVGDSLHPHDVVLRTACPPDYTLAMRRSPDDIPLMTPNTITMIPSTMGGLTSLHSFNTFP
SSGQNNTLPHPHPHSHSTTRV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagtggaggcactcttcaaggactgggagtcagctacttgagacagtcaagagt
gggaacaggatgatgggatacataaggctcaaaggttccttaaacagtggacggtgggta
tcctctctaatatggctgggactgctgcttctgcagccatctccggctgctgtgtcggct
cagaaacttgacgagaacgacccggtggttaccaccacatacggaaagctgcgtggtgtt
aaaaaggagctcaacaacgagattctgggtcccgttgttcaatttctgggcgtcccgtac
gctgctccgcccactggcgagcgccgctttcagccaactgagccaccggcatcgtggcag
gagatccgcaatgccacacactttgccccagtgtgccctcagagcattgtggagggccgc
ctgccagatgtgatgctgccggtgtggttcaccaacagcattgacgttgtgtccacatat
gtccaggaccagagtgaagactgcctctatattaacatctacgtccccactgaggatggt
ccccttacaaagaaacacactgatgatttaggtgatagtgaccgcacggacgacgaagac
attagggagagtggaagccccaagccagtgatggtttttatccatgggggctcctacatg
gaaggaactgggaatatgtttgacggcagcatcctggccagctatggaaatgtgattgtc
ataactgtcaactaccggctgggcgtcctaggattcctgagtacaggtgaccaggcagcc
aaagggaattacggtttgctggaccagatccaggctctgcgttggatcagtgagaacatt
gcagcctttggcggtgacccgttacgtatcactgtgtttggctcaggggctggagcttcc
tgtgtcaacttgctaacactgtctcactactccgagggcaaccgctggagcaactctacc
aaaggactgtttcagagggccatcgcccagagtggcacagctctgtccagctgggctgtc
agttttcagccagccaagtacgcccggatgctggcccgtaaggtgggctgtaacttggag
gacactgtagagcttgtggggtgtcttcagagaaaacattacaaggagctggtagatcaa
gacatccagccagctcgctaccacatcgcctttggacctgttattgatggagatgttata
cctgatgaccctcaaatactcatggagcaaggtgagttcctcaactacgatataatgctg
ggagttaaccagggcgagggccttaaattcgtggagcttatcgtggacaacgaaaacggc
gttcaggctaacgactttgactacgccgtgtctagctttgtcgatgacctgtatggctac
ccagaaggtaaagacatcctccgagagaccatcaagttcatgtacacagactgggccgac
aggcacaacccggagacccgccggaaaacactgctggctcttttcaccgatcaccagtgg
gtggcaccggctgttgccacagctgacctgcactccagctttgggtcaccgacgtatttc
tatgccttctaccaccactgtcagactgaacaggtaccaccgtgggcagatgcagcacat
ggagatgagatcccttatgtgttcggcctaccgatgattggaccaacagagctgtttccc
tgcaacttctccaagaatgacgtaatgctcagtgccgtggtcatgacctactggacaaac
tttgccaaaaccggggatccaaaccagcctgtcccccaggacaccaagttcatccacacc
aagcccaatcgctttgaagaagtggcttggacacgctacaaccagaaagaccagctttac
ctacacattggcctgaagccccgggtaaaagagcactatcgtgccaacaaggtcaacttg
tggttggagctggttcctcatctacacagcctcaacgaggtcacgcagctcatccccacc
accaccaagatcccttcaccagaggctaccaatcgcaccccaaagactaagattctggcg
accaagcgccctaacccgagtcctttccccaccgagacccaggacagccacaaccagcca
cacctggtggaccagcgggactactccactgagctgtcggtgaccatcgctgtaggagct
tcccttctcttcctcaacatactagccttcgcagccctttactacaagaaggacaaacgc
cggcatgacgtccacaggcgctgcagcccccagcggagcgccgccaacgacctggctcac
actcaagaggaggagatcatgtccctgcagatgaaacagcactcagacctggactgcagg
ggagtgggcgactccctgcacccgcacgacgtggtgctgaggactgcctgcccgcccgac
tacactctggcaatgaggcgctcaccggatgacatcccgctcatgacgccaaacaccata
accatgatccccagcaccatgggggggctcacctccctccactctttcaacaccttcccc
agcagcgggcagaataacacactgccccatccgcacccacactcacactccaccacccgg
gtatag
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