Etheostoma cragini (Arkansas darter): 117950567
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Entry
117950567 CDS
T07493
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03420
Nucleotide excision repair
ecra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117950567 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
117950567 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ecra03051
]
117950567 (rad23ab)
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117950567 (rad23ab)
Proteasome [BR:
ecra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117950567 (rad23ab)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117950567 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
UBA_3
Dsc3_N
Ubiquitin_2
CUE
UBA_2
Motif
Other DBs
NCBI-GeneID:
117950567
NCBI-ProteinID:
XP_034737598
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All DBs
Position
9:27617552..27629644
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AA seq
486 aa
AA seq
DB search
MLTITLKTLQQQTFKIEIDPELTVKALKEKIEKDRGKDAFPATGQKLIYAGKILNDDTPL
NEYKIDEKNFVVVMVTKPKPAPPPQAAPQPTAQPAVAPAPAPPSASGPALASGTTQEPST
PTHPASAPTSTPQSVPCSPPPVPENTTRAFVETTAALDSNTTPGSAPASAPAATPASASA
PAPKVAQTAPASAPADRPTATPDPTQPEEKLREDPENEPSATEEVHSIAASLVDELGLLE
EAASILVTGPAYENLVSEIMCMGYEREQVVAALRASYNNPDRAVEYLLMGIPAEASDLPP
PEPIRQSAPANPPTPATQEPLQPPAALNPGPVSRSQPSPAGGGSAPTENPLEFLRNQPQF
QQMRQIIQQNPALLPALLQQLGRDNPQLLQVPHQHTHRATQITQHQERFVQMLNEPRSGD
TEGDGAEAQGSPQTNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQ
QTWDDE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgataacactgaagaccctccaacagcagacgttcaaaatagaaatagaccca
gaattgacggtcaaagccctgaaggagaaaatagagaaggacagaggaaaagatgcattt
cctgctacaggacaaaaactcatctatgcagggaaaatcttgaacgatgacaccccgctg
aacgagtacaaaatcgatgagaaaaactttgtggtggtcatggttaccaagcctaaacca
gccccacctccacaagcagcacctcagccaacagcccaaccagctgtggctccagcacca
gcaccaccctctgcttcaggccccgcactcgcctctggcacaacacaagagccatccaca
ccgacgcatccagcgtctgcacccacatctaccccacagtcggtgccttgctccccgcct
ccagtgccagaaaacaccacccgggcgtttgttgaaacaacagcagctctggactcaaac
acaaccccgggctcagctccagcctcggctccagctgctactccagcctcggcctcagct
ccagctcccaaagttgcccagacagccccggcctcggcccctgcagaccgccccaccgcc
acaccagacccgacccagccagaagaaaagctaagggaagacccagagaatgagccatct
gccactgaagaagtccactccattgctgccagccttgttgatgaactgggtctccttgaa
gaagcagcgtcaatactggtgacaggtccagcctatgagaacctggtgtcagagattatg
tgcatgggttatgagcgagagcaggtagttgcggcgctccgagccagttacaacaacccg
gaccgggcagtggagtatctactcatgggtattccagcagaggccagtgatctgccccct
ccggagccaattagacaaagtgctccagccaacccccccacccctgctacacaagaacca
ctgcagcccccagcagcgttaaacccagggccggtgtctcgcagccagccctcccctgct
ggaggaggctccgcccccacagagaaccctctggagttcctgaggaaccaacctcagttc
cagcagatgagacagattatccagcagaacccggccctcctaccagcccttctgcagcag
ctaggcagagacaacccccagctgctgcaggtaccacaccagcacacccaccgtgctaca
caaatcacgcagcaccaggagcggtttgtgcagatgctgaatgagccacgaagcggagac
acggagggggacggggccgaggctcaggggtcaccacaaaccaactacatccaggtcacc
ccgcaggaaaaggaggccattgagaggttaaaagcgctgggctttccagaaggcttagtc
atccaggcttacttcgcctgcgagaagaatgagaatctagctgctaacttcctgctacag
caaacgtgggacgacgagtaa
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