Etheostoma cragini (Arkansas darter): 117950584
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Entry
117950584 CDS
T07493
Symbol
cnga3a
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha isoform X1
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117950584 (cnga3a)
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117950584 (cnga3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
RR_TM4-6
Tim54
EMC3_TMCO1
PPP4R2
Zip
NPR3
Presenilin
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117950584
NCBI-ProteinID:
XP_034737617
LinkDB
All DBs
Position
9:23142472..23150685
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AA seq
739 aa
AA seq
DB search
MAKIGSEISLSSRQWVPPNKPVDELAVIENRDSRAHSLCEDNSERAMSSESHRDSVTGAG
AMARLSYFFFMLWNWVSHRVHPETERHDSFLERFRGPELKDLSSRESTAQSMGRNDVNRK
RNLASKWPLATYNMNNCNNTDDKKEDKKEEIKKDEKKDEEKKDEKKDGDKKEEEKKDEKK
DEKKDEKKDEKKDEKKDDKKKEAPPKDVWIMDPATDLYYRWLTVIAGPVFYNLIMVVTRA
CFNELQDTYTKLWIFLDYTSDFIYYTDTFVRSRTGYLEQGLLVKDSKKLRDKYRTTSQFK
YDMISMIPTDLLFLKFGFNNPEFRFNRLCKISRLFEFFERTETRTSFPNLFRISNLVLYI
LIIIHWNACMFFAISKTIGFGSDTWVYPNISHPEYGRMARKYIYSLYWSTLTLTTIGETP
APVKDVEFLFVIADFLTGVLIFASIVGNVGAMISNMNASRAEFQAKIDSIKQYMQFRKVT
KDLEARVIKWFDYLWTEKKTCDEKEVLKNLPDKLKAEIAINVHLDTLKKVRIFQDCEAGL
LIELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGAYFGEI
SILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLMEALTEYPDAKKALEEKGKAMLMKDN
MIDEAVANAGADPKDLEEKIIKLQDNLELMKTKFAQLMAEFTSNQTRMKQRVTEMENKVK
SIQPQDLSEVVADKDKKVQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcggcagtgaaatctccctttcaagcaggcagtgggtgccccccaacaag
cctgtcgatgagcttgctgtcattgaaaatagggacagcagggctcactctctttgtgaa
gacaactccgagagagcgatgtcttcagagtcccacagagactccgttacaggggctggg
gcaatggctaggctctcttacttcttcttcatgctgtggaactgggtgtctcacagagtg
caccccgaaacagagaggcatgactctttcctggagcgcttcagaggccctgaactcaaa
gacctctccagtcgagagagcactgcccagtctatgggccgcaacgacgtaaaccggaag
agaaatcttgctagtaagtggccgctagctacttacaacatgaacaactgcaacaacaca
gacgacaaaaaagaggacaaaaaggaggagattaaaaaagatgagaaaaaagacgaggag
aaaaaagatgagaaaaaagatggggacaagaaggaagaagagaagaaggacgagaagaag
gatgagaaaaaagatgagaagaaagatgagaagaaagatgagaagaaagacgataaaaag
aaagaggcgccaccgaaagatgtctggattatggatccagccacagacttgtactacaga
tggctgaccgtgatcgcaggcccagtattttataacctgataatggttgtaacaagagcc
tgttttaatgaactgcaggacacatatacaaaactctggatattcttggactacacctca
gacttcatctactatacagatacttttgtcagatcaagaacaggttacctagaacaaggc
ctgctggtaaaggattccaagaaactgagagataaatatagaacaacatctcagttcaaa
tacgacatgatatcaatgatacccactgatctgctgtttctgaaattcggattcaacaac
cctgagttcagattcaaccgcctttgcaaaatatcaaggctttttgagttcttcgagcgg
actgaaaccagaaccagcttcccaaacttgtttcgaatcagcaacctcgtactttacatc
ctcatcattatccactggaatgcttgcatgttctttgccatttcaaaaaccattggattt
ggatctgacacatgggtgtatcccaacatcagccacccggagtacggccgcatggccaga
aagtacatctactccctgtattggtccacactgaccctcaccaccatcggagagacccct
gcaccagtcaaggatgttgaattcctctttgtaatcgccgacttccttactggtgtgctg
atctttgctagtatcgttggtaacgttggtgccatgatctccaacatgaatgcttctcgt
gctgagttccaggcaaagatcgactccataaagcagtacatgcagttccgaaaggtcacc
aaagacctggaggccagggtcatcaagtggtttgactacctgtggactgagaagaagact
tgcgatgagaaggaagttttaaagaacctcccagacaagctaaaggctgagattgccatc
aatgtccatttggatacgctgaaaaaagtacgtatcttccaggattgcgaagccggtctg
ctgattgaactggtgctcaagctgcagccacaagtgttcagtcctggagattacatctgt
aagaagggagatattggcagagagatgtacatcatcaaagaggggaagctagcagtggtg
gcagatgatggagtcactcagttcgtagtcctcagcgatggcgcatactttggggaaatc
agtatcttgggaatcaagggcagtaaagcaggcaacagaagaacagccaacatccgaagc
gtaggatactctgatctctttgccttgtccaaagacgacttgatggaggctctcacggag
tatcctgatgccaaaaaagctcttgaggagaaggggaaagccatgttgatgaaagacaac
atgattgatgaggcagtggccaatgccggcgctgaccccaaagacctggaggagaagatt
ataaaactgcaagacaacctggaactcatgaagaccaagttcgcccaactgatggcggag
ttcacctccaaccagacgaggatgaagcagagggtcacggagatggagaacaaagtgaaa
tccatacaacctcaggatctgtcagaagtggtggccgacaaagataaaaaagtccagtaa
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