Etheostoma cragini (Arkansas darter): 117950594
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Entry
117950594 CDS
T07493
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117950594 (polrmt)
Enzymes [BR:
ecra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117950594 (polrmt)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
117950594 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
Peptidase_S30
Motif
Other DBs
NCBI-GeneID:
117950594
NCBI-ProteinID:
XP_034737637
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All DBs
Position
9:complement(17603682..17647817)
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AA seq
1393 aa
AA seq
DB search
MSLLRVCAFAKCLNRRSLFGKCAESVRVSPADRCQLCASISGGAVRRISETPLLFQRRNV
SFVIPKREDAKKRVLEQSQLLDVLEARIQQLQSDIFLDVQHAEVQFVKKPSSGRGVLPGK
SSKSAPKEKSSISKSGQTVAKGASESQPSRWMEKLTQEKNNKLRKQQHLHQKMQKNVKEK
PTAKSKGSKSSSVLPGTSHKTISSTKKTTKTKTLAKNQKGCTKLSDEICAAVSSPVASPV
ASTAAAAAATAALAHKVSKGKHKGSKNPVPGKEGQKQTVADAQARAKELAEVEELERRLS
QQVSQWTSSSNPERLQEYSEGAACGDIQLSIRSYLEACVFAGDVERAHRFLLSQHRVMSR
RKHLNTGVYNIIMRVWAKKGTLNQIGRMFILLEEAGLKPNLGSYCTALECMGRNPNCSPK
VIARCLSQMEEDGLSVDDLFSQCVFRQDERDMVLKAVHIVQPDYQPSLNANTNQCSSSLV
KDFYTQRSDHQYPKLDFTQEELQERFKHQLSLEQACTITIDSVEAAKPITENMAKMRELL
ADQRAQWQKILLQALRESKRILANTNTKDYRLNLYPYLCVLEDREYVDIMIQSVASLPPS
GESLKILASDLGNRVYTKYSVRQKHQNQIVEKLGNIYNGYIDLLAKDTKEYDILPSEHWC
KLETDQSSGPTLQGGETHWPYIVSLELGTYMVDMMVKNLKINSDILNPAFDRKLIPILYH
MYTFRSTRQVGFIKPHPILTQMQQEAMETKLTFDSYVIPMLCPPVPWTSVKFGAYLLTPT
KLMRTVEGATQHEVLLEKCQDLRPVLDSLNQLGNCAWTINKPLLDIIISIFNDRGSDKLD
IPPPLSEAPKIPHFNAQDPNYTASEKAHMKREVINAKKKCSEMHSLRMDALYKLSIANHM
RDEIFWFPHNMDFRGRTYPCPPYFNHLGSDVTRAVLVFAEGKPLGPKGLDWLKIHLVNLT
GLKKRSSLNGRLEYANTIMEDVLDSADNPLNGKKWWMNADEPWQALSCCMELANAVRSPD
PTQFISHFPVHQDGSCNGLQHYAALGRDVIGATSVNLMPCDVPQDVYSGVAQQVEEFRVR
DAKSGLKIAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIEEFPKEYVWDAS
HYLVRMVFSGLKEMFTGTREIQDWLTESARLISKSGHTVEWVTPLGLPIIQPYHRTRNQV
LKSTMQHINLQISHDAKERPDTVKQKNAFPPNFIHSLDSTHMMLTALHCYSAGLTFVSVH
DCFWTHALTVDTMNKVCREQFVALHSQPILQELSNFLLLKYCTGLPYLCCPDMLFGLLIQ
TLNLAITKFSAFVINGVIMAARTATSRSQFQFFLCGSVCCCPQWRYIAASLSMRWTETLL
LCKPSFHLHLYTY
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttctcagagtgtgtgcctttgctaaatgtctgaatcgtcgaagtttatttgga
aagtgtgctgaaagtgttcgtgtgtctcctgcggaccgctgtcagctctgtgcgtccata
agtggtggcgcagttagacgtatatcagagacaccgttgctgtttcaaagaagaaatgtt
tcatttgtcatcccaaagagagaagatgcaaagaaacgtgtactggaacagtctcagttg
ttagacgtgcttgaggcaaggatccagcaactccaatccgacatctttttagatgtccag
catgcagaggtgcagtttgttaaaaaaccctcttctggaagaggggttttacctggaaag
agttccaaaagcgcacctaaggagaaaagtagcatttctaaatcaggacagactgttgct
aaaggagcttctgaatctcagcccagccgctggatggaaaaattaactcaggaaaagaac
aacaaactcagaaaacagcagcacctccatcagaaaatgcagaagaacgtgaaggagaaa
cctacagctaaatctaaaggtagcaaaagcagctcagttctccctggtacatcacataaa
actatatcttccacaaaaaaaacgacaaagacaaagaccttggcaaagaaccaaaaaggt
tgcacgaaattgtccgatgagatttgtgctgcagtttcttcaccagttgcctcaccagtt
gcctccactgctgctgcggcagcagcaacagcagctctggcacataaagtatctaaaggg
aaacataagggctctaaaaatccggttcccggtaaggagggccagaagcagaccgttgca
gatgcccaggccagggcaaaggagctggctgaggtggaggagctggagaggaggctcagt
caacaagtaagccagtggacatcttcaagtaacccggagcgcctacaggagtacagtgag
ggagctgcatgtggggacatccagctgagcatccgctcttacctggaggcgtgtgtgttc
gctggggacgttgagagggcgcaccgtttcctgctcagccagcacagagttatgagccga
cgtaaacatctgaacactggtgtctacaacataataatgagggtgtgggccaagaagggc
acattaaatcaaattggccgcatgtttattctgttagaagaggctggtctgaagccaaac
ctgggatcctactgtactgccctggagtgtatgggccgcaatcctaactgctccccaaag
gtcatcgcaaggtgcctaagccagatggaggaggatggcctgtctgtggacgacctgttc
agccagtgtgtgttccggcaagatgaaagggacatggtgctaaaggccgtgcacattgtc
cagcccgactaccagccaagcctcaacgcaaacacaaaccagtgctcttcatcgctggtt
aaggacttctacacacagaggtcagaccaccagtaccccaaactggacttcactcaggag
gagcttcaggagcgtttcaaacatcagctgagccttgaacaggcctgcactatcactatc
gactctgtggaggctgccaagcccatcactgaaaacatggccaaaatgagggagctgctg
gcggatcagcgggcacaatggcagaagatccttctccaggccctgagggagagtaagaga
atcctggctaacaccaacaccaaggactacaggcttaacctttatccctacctctgtgtg
ctggaggatagggagtatgttgacatcatgatacagagtgttgccagcctgcctcccagt
ggagagtcactgaagattttagccagtgatctgggcaacagggtctacacgaagtactct
gtgcggcagaagcaccagaatcagattgtggaaaagttgggcaacatttacaacggttac
atagacctgctggccaaagatacaaaggagtatgacatcctacccagcgagcattggtgt
aagctggaaacggaccagagttcagggcccacgctgcagggaggagagacccactggcca
tacatagttagcctggagctgggcacctacatggtggatatgatggtcaagaacctcaaa
attaacagcgacatcctgaacccggctttcgacaggaagctcatccccatcctctaccac
atgtacacctttcgtagcacacggcaggtcggcttcatcaagccccaccccatcctgacc
cagatgcagcaggaggccatggagaccaaattgacctttgactcctatgtgattccaatg
ctgtgccctcctgtgccctggacgtctgtcaagtttggagcctacctattgacaccgacc
aagctgatgcgcacagtggaaggggccacacaacatgaggtgttgttggagaaatgccag
gacctccgtcctgtcctcgactctctcaatcaactgggcaactgtgcctggacaatcaac
aaacccttgttggatattattatctctatcttcaatgatcggggtagtgataaactagac
atccctcctcctctgtcagaggcccccaaaataccccacttcaacgcccaagatcccaat
tataccgcttctgagaaagcccacatgaagagggaggtgattaatgccaaaaagaaatgc
agtgagatgcacagcctgcgtatggacgctctgtataaactctccatcgccaaccacatg
cgggatgagatcttctggttccctcacaacatggacttccggggacgtacctacccctgt
cctccgtactttaatcacctaggaagtgatgtcacacgggctgtgcttgtgtttgcagag
gggaagcccctcggtccaaagggactagactggctaaagatccatttagtcaatctgaca
ggactgaagaagaggagctcgctcaacggacgactggagtacgccaacactatcatggag
gacgtcctggactctgcggacaaccctctcaatggtaagaagtggtggatgaatgcagat
gagccttggcaggctctgtcctgctgcatggagctagccaacgctgtgagatctcccgat
ccaacacagttcatctcccactttcctgttcaccaggacggctcctgtaacggtctccag
cactacgctgctctaggcagagatgtgattggtgccacatcagtcaacctcatgccctgt
gacgttccccaggatgtgtacagcggagtagcacagcaggtggaggagttcagagtgcgg
gatgcaaagagcggtttgaagattgcccaggtcctggagggcttcattagcaggaaggtg
gtcaaacagaccgtaatgactgtggtgtacggggtcacgcgctacgggggacgcctccag
atagagaaaagactgaaggagattgaggagttccccaaggagtatgtatgggatgcatct
cattacctggtgcgtatggtgttcagtggcttaaaggagatgttcacagggaccagagag
atccaggattggctgaccgagagcgccaggctcatctccaagtctggccacactgtggag
tgggtaaccccactgggtttacccatcattcagccctaccaccgcacacgcaaccaagtg
ctgaagagtaccatgcaacatatcaacctccagatcagccatgacgccaaagagaggcca
gacacagttaaacagaagaacgccttcccgccaaacttcatccactctctggactcaaca
cacatgatgctgactgctctccactgctatagtgctggcctgacattcgtctcagttcac
gactgtttctggacccacgccctcactgtggacacaatgaacaaggtctgtcgggaacag
tttgtcgccctacacagccaaccgatccttcaggagctgtccaacttcctgttgctgaaa
tactgcaccgggctcccctatctgtgttgcccagatatgctatttggtttgctcattcaa
acattgaatttggctataactaaattttcagcttttgtcattaatggtgtaatcatggct
gcccgcacggccactagcagatcccagtttcagttttttctttgtgggtctgtttgttgt
tgcccacagtggaggtacattgcagcgtctctgtcaatgaggtggacggagactttgctg
ttatgtaagccctcgttccatctccatctgtatacctactga
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integrated database retrieval system
