Etheostoma cragini (Arkansas darter): 117950596
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Entry
117950596 CDS
T07493
Symbol
si:ch73-61d6.3
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03272
Virion - Hepatitis viruses
ecra04514
Cell adhesion molecules
ecra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117950596 (si:ch73-61d6.3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117950596 (si:ch73-61d6.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117950596 (si:ch73-61d6.3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117950596 (si:ch73-61d6.3)
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117950596 (si:ch73-61d6.3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Spectrin_Anc-1
DASH_Dad1
Blo-t-5
DUF7179
UPF0184
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
117950596
NCBI-ProteinID:
XP_034737641
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All DBs
Position
9:8157873..8174901
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AA seq
545 aa
AA seq
DB search
MFDKQHYESPPVYTPPFRSPSNNGFGPPGSFNAPQSGYNAYPPPPGSYYIEDKPQHFYKW
LSPPGIIKAMMATVIVLCVAIFACVASTLMWDMQYGMGMGMGMGYGSGFGGGSYGSGYGG
YGGYGGGYGGGYGNGYGSYLSPYSAKTTMIAMAAINFIGALAFFITSFSKSNTVRGRKFF
LALMIASIIMAILQGIINIVYIVGVNPMSQGTSSMMYNPMLMMCQNLYQTSYSQMGGVGG
FPMYNQYLYHYCFVDPQEGVAMVCGFVVVIAFGVAAFFAHKTRGKIWRYGKPNIYWEEPL
VGGKASEGRDVEEWVNNVEESRSVQDAPTLLVSEKGAGLLNASANSVISYPPAKVDSSTY
NEDNYDNNEYSERTTSRPSEAFSHGGRTSSSPSEGTGGGRKPSANRGKRRRRNPELDESQ
YETEYTTGGETGNELDGEEWGNMYPDITSDAQRHDYKKEFDADLKEYKRLCAEMDDINDQ
LNKLSRQLDTLDETSSKYQAVAVEYNQLKDLKQTSDYQSKKKQCRSLRHKLFHIKRMVKD
YDKNH
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaagcagcactacgagagtccacctgtttacactcctcctttccgctcgcca
tccaacaacggcttcggtcctccaggcagcttcaatgcccctcagagcggttacaacgca
tacccacctccgccggggtcttattacattgaggacaaacctcaacacttctacaaatgg
ctgtcacctccagggatcatcaaggccatgatggctacagtgattgtgttgtgtgtggcg
atatttgcttgcgtggcctccactctcatgtgggacatgcaatatggaatgggaatggga
atgggaatgggctacggcagtggatttggcggtggcagctatggctcgggatacggtggt
tatggaggttatggaggaggctacggaggaggctatggaaatggctatggctcctacctc
tcaccttactcagccaaaaccaccatgattgccatggcagccattaactttatcggggca
ctggccttcttcatcacaagtttctctaaatccaacactgtccgtggtagaaagtttttt
ctggccctcatgatagccagcatcatcatggcaatcctgcagggcatcataaacattgtc
tacattgtcggggtgaaccccatgtcccagggtacctccagtatgatgtacaatccaatg
cttatgatgtgccagaacctctaccagaccagctactctcagatgggaggagtgggaggc
ttccccatgtacaaccagtatctctaccattactgctttgtggacccacaggagggggtt
gccatggtgtgtggattcgtggttgtcatcgccttcggtgttgcggctttcttcgcacac
aaaacaagagggaagatctggcgatacgggaaaccaaacatctattgggaagagcctctc
gttggcgggaaggcctcagagggcagggacgtagaggaatgggtgaacaatgtagaggaa
agccgcagtgttcaagacgcccctaccctgctggtgtcagagaagggagccgggctgctc
aacgcctcagcgaacagtgtcatctcctaccccccagctaaggtggacagcagcacctat
aatgaggacaactatgacaacaatgagtactcagagagaaccacaagcagaccatcagaa
gccttctcccacggtggacgaaccagctcgagcccttcagaggggaccggcgggggccgc
aaaccctcagccaacaggggcaagagacgaagacgtaacccagagctggatgagtctcag
tatgagacagagtacaccacaggaggcgaaacaggcaatgaactcgatggagaagagtgg
gggaatatgtacccagatataacatctgatgctcagcgtcatgactataagaaagagttt
gatgccgaccttaaggaatacaagcgcctgtgtgctgagatggacgacattaatgaccag
ttaaacaaactcagccggcagctggacacactggatgaaacctcttccaaataccaggct
gtagcagtggaatataatcagttgaaggatctgaagcagacatcagactaccaatctaag
aagaaacagtgtcgcagcctgagacacaaactgttccacatcaagcgcatggtgaaggac
tacgacaagaaccactga
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