Etheostoma cragini (Arkansas darter): 117950619
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Entry
117950619 CDS
T07493
Name
(RefSeq) vitellogenin-1-like
Organism
ecra
Etheostoma cragini (Arkansas darter)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vitellogenin_N
Vit_open_b-sht
Vit_b-sht_shell
VWD
Motif
Other DBs
NCBI-GeneID:
117950619
NCBI-ProteinID:
XP_034737697
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Position
9:13307469..13316667
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AA seq
1688 aa
AA seq
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MRVVVLALTLALVAGQHHYFVPEFAAGKTYVYKYEALLLSGLPEEGLARAGLKVSSKVLI
SAADQNMYMLKLAEPELYEYNGVWPKDPFRPATRLTSSMAAQLSTPIKFEYANGVVGKMF
APEGISTMVLNIYRGILNVLQLNIKKTQNVYEMQEDGAQGVCKTIYAISEDEKAERIILT
KTRDLNHCQEKIMKDIGLAYTEKCAECQHDSKNLRGTTAFNYILKPVANGIMIMEAAVSE
LIQFSPFTEMNGAAQMETKQSFVFLEIQKAPIVPIDTKYVSRGSLKYEFSTELLQTPIQL
IKIHNVQAQIVEVLNHLVAHNMERVHEDAPIKFLELIQLLRVARFEDMEMVWSQYKTKHV
YRQWIVDAIPAIGTPIALKFIKEKFLADDLTVAEAAQALIASVHMVTADTEAINLVEALA
FNHKIVENPILREIVFLGFGTMISKYCVERAACPAELIKPIHALLAEAVAKDKTQDIILL
LKVLGNAGHPTSLKPITKILPIHGTAATSLPMRVHAEAIMALRSIAKKEPRMIQEWALQL
YMDRALHPELRMLACIVLFETRPPMGLVTTLANIVKTEKNLQVASFTYSHMKSLTRSSAP
IYASVAAACNIAVKILSPSLDRLSFRYSKAIHMDIYNHPMMFGAAASAYYINDAASILPR
SIVAKTSAFLAGAAADVLEVGVRTEGLQEVLLKNPALVDNVDRITKMKRVIKALSQWKAL
PSSTPLASIYVKFFGQEIAFANIDKVLIDQAIAIATGSTVGWNAIKALLSGASFHYAKPL
LVTEIRRILPTAAGIPMELSLYTAAVAAATVQVRAIATPALPENFHLAQLLKTDIKLETE
IIPSVAVNTFAVMGVNTAIFQAAVLSRAKLNSIMPAKIAARLDIKEGHFKIEALPVSVPE
NIAAVYVETVAVARNIEDLAGATFTPIIPAKVYQPISWEIPTSKMVSSAAASLSQSSEII
PQDVAVPIFIVRPKAAQFEKKYCAKSIGLKGCFKIAIQNAAYIKNIALYKLAGKHSIALS
FEAIEGDVIERLEMEVQVGPKAAKKLIKQIILSEETVEGSPVLMKLRKILVSGQRNVSSS
FSSSSSRSRSSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSHVSSKAIDKAAPVRRLRG
SSSSTSVSKSSSASSLASLFTASSSSSSSSASRSKRVTYPHNFQTNHKMQALTSQGAAVS
SRRSNASSFEAIFKQKIFLGDEAAPNVAIIFRAVRADKKEMGYQVAVYLSKPTSRIQIIM
AALAADNNWQFCADGAVLSKSKATAKIAWGAECKQYQTMIAAETGLLGPSPAARVRVTWS
NLPSAFKRYAKKVYDVLPASIMAGMVRGKDKNTVKQLSLTVVATSDKTIDLIWKTPTHTV
YKVALSLPFRLPLEEIKGLTPFDEIADNIHYLFSKAGAAECTFVKDTLTTFNNRRYKNKM
PLSCYQVLAQDCTNEMKFIVLLKKDHIDQNHINVKIADIDIDLYPKNTNVIIKVNGMEIP
INNLPYQHPTAKIQIRQNAEGVSVYAPSHGLQEVFFDKDSWAVKVVDWMRGQTCGLCGKA
DGEIRQEYRTPNGRLTKNAVSYAHSWVLPAKSCRDSTECRMKLESVQLESQVNLYDQESQ
CHSVEPVLRCLPGCFPVKTTTVTVGFHCLPADSALNRSESVSSIYDSSVDLRTTTEAHLA
CSCTPQCA
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgagagtggttgtgcttgccctgactctggcccttgtggctggtcaacatcattacttt
gttcctgaatttgctgccggtaagacttatgtatacaagtatgaggcactgctcctgagc
ggcctgccggaggaaggtttggcaagagccggactcaaagtcagcagcaaagttctcatc
agtgctgcagaccaaaatatgtacatgctgaagcttgcggaacctgagctctatgagtac
aatggcgtctggcctaaggatccttttagaccagcaaccaggctgacttcatccatggct
gctcagctctcaacacccatcaagtttgagtatgccaatggtgttgttggaaaaatgttc
gcccctgagggaatttcaacaatggtgctcaacatctacagaggtatcctgaatgtcctt
cagctcaacatcaagaagacacagaatgtctatgagatgcaggaggacggagctcagggt
gtctgcaagaccatctatgcgatcagtgaagatgaaaaagctgaacgcatcattttaaca
aagacccgggatttaaaccactgtcaggagaagatcatgaaggacattgggttggcatac
actgagaaatgtgcagagtgccagcatgattcaaaaaacctgagaggaactacagcattc
aactacatcttaaagccagttgctaacggcatcatgatcatggaggcagctgtcagtgag
ctgatccagttctcacctttcactgaaatgaatggagctgctcagatggagaccaagcaa
tccttcgtgttccttgagattcagaaggctcccattgtacccattgacactaagtatgta
tcccgtggatctctaaagtacgaattttccactgagcttcttcagacgcctattcagctc
atcaagatccacaatgtacaggcccagattgtcgaggttctgaatcatctggttgcccac
aatatggagagagtccatgaggatgcccctataaagtttttggaactaattcagcttctc
cgtgtggcccgctttgaagacatggaaatggtttggagccaatacaaaaccaaacatgtc
tacagacagtggattgtggatgccattcctgccattggaactcctattgctttgaaattc
atcaaggagaaattcctagctgatgaccttactgttgctgaagctgctcaggctttgatt
gcatctgttcacatggtgacagcagacactgaggccatcaatctggttgaggccctggca
ttcaaccacaagatagtggaaaacccaattctgcgtgagattgtttttcttggcttcggt
accatgatttcaaaatactgtgttgagagagctgcctgcccagctgaattaataaagccc
atccacgccctccttgcagaggctgtcgctaaagataagacccaggacatcatcctgctc
cttaaagttctgggtaatgctggccatcctactagccttaagccgatcacaaagatcctg
ccaatacatggcacagcagctacatctctacccatgagagtccacgctgaagccatcatg
gccttaaggagcattgctaagaaggagccaagaatgatccaggaatgggctcttcagctc
tacatggacagggctcttcacccagagcttcgtatgcttgcatgcattgtgctgtttgag
acaaggcctcctatgggtttggttacaactcttgctaacattgtgaagacagagaagaat
ctgcaggtagcaagcttcacttattctcacatgaagtccttgaccaggagcagcgctcct
atctatgcctcagttgctgcagcttgcaacatcgctgtcaaaatattgagcccaagtctg
gaccgactgagcttccgttacagcaaggctatccatatggacatctataaccatcctatg
atgtttggtgctgctgccagcgcttactacatcaatgatgctgcctccattctgcccaga
tctattgtggctaagacaagtgccttccttgctggagcagctgctgatgttctggaggtt
ggagtaagaactgagggactccaggaggttcttctaaaaaaccctgcacttgttgacaat
gtggacaggatcaccaagatgaagcgtgttattaaggctctctctcagtggaaggctctg
cccagcagcacacctctggcctctatctatgtcaaattctttggtcaagaaattgccttt
gccaacattgacaaagtcttgattgaccaggccattgcgatcgccactggttccactgtt
ggatggaacgcaatcaaggctctgctgtctggtgcttccttccactatgctaagcccctc
ctagtcactgaaataaggcgtatcctgccaactgctgctggtattccaatggagctcagt
ctgtacactgctgccgtggctgctgcaactgttcaagtcagggccattgcaacaccagct
ctgccagaaaacttccatcttgctcaactattgaagacagacattaagcttgagactgag
atcattccaagcgttgctgtgaacacatttgctgtgatgggggtaaacactgccatattc
caggctgctgtgctatcaagagctaaactcaactccattatgcctgccaaaattgctgca
agacttgacattaaagagggacactttaagattgaagctctgcctgtttctgtgcccgaa
aatattgcagctgtctatgttgagactgttgctgtggcaaggaatattgaggaccttgct
ggtgcaacattcactcccatcatccctgctaaagtataccagccaatctcatgggagatt
cccacatcaaaaatggtttcatctgctgctgctagtttgtcacaatcttcagagatcatt
ccccaggatgtggcagttcccattttcattgtaagacccaaagcagctcagtttgagaag
aagtactgtgctaaatctattggactgaagggctgtttcaagattgccattcaaaatgct
gcttacatcaagaacattgccctttacaaactggctggaaagcattctattgctctttcc
tttgaagcaattgaaggtgatgtcattgagagactggagatggaggttcaagttggacca
aaggctgccaagaagctcattaaacagatcatcctgagtgaagaaactgttgaaggaagc
ccagtcttaatgaagctcaggaaaatcctggtgtctggtcagaggaatgtctcctcatct
ttctcctctagctccagcagaagtcgctcaagccctagctccagctcctcttccagctcc
tcttccagctcctcttccagctcctcttccagctcttcttccagctcttcttccagctcc
tcatcgcatgtcagctcgaaggccattgataaagctgctccagtccgtagacttcgcggc
agcagctcttccacatctgttagcaagtccagctctgcatcaagccttgcatcgctcttt
actgcaagctcaagttcctctagctccagtgccagtcgctcaaagcgagtgacttatccc
cacaatttccagacgaaccacaagatgcaggctctcacttctcaaggagccgcagtttca
agccgcagaagcaatgcctcaagctttgaggcaatcttcaaacagaaaatattccttggc
gatgaggctgctcctaacgttgccatcatcttccgtgccgtcagagctgacaaaaaggaa
atgggataccaagtggcagtctacttgagcaaacctacaagcagaattcagatcatcatg
gctgccttggccgccgataataactggcagttctgtgctgatggagctgtgcttagcaag
tcaaaagccacagctaaaattgcatggggagctgaatgcaagcaataccaaaccatgatc
gcagcagagactggtcttcttggtccaagccctgcagctcgcgtgagagtgacatggagc
aacctgccttcagcctttaaacgctatgcaaagaaggtgtatgatgtccttcctgcttca
ataatggctggcatggttcgaggaaaggataaaaacactgttaagcagctctcacttaca
gttgttgccacatctgacaagaccattgacttaatttggaaaacaccaacacacactgtc
tataaggtggctttgagtcttccattcagactgccacttgaagaaatcaaaggtctcacc
ccctttgatgaaattgctgataacatccactacttgttttccaaggctggtgcagctgaa
tgtaccttcgtcaaagacacactgaccacattcaacaacaggagatacaagaacaaaatg
ccgttgtcttgttaccaagttctggcacaggattgcaccaatgagatgaaatttatagtt
ctgctgaagaaggatcacattgatcagaaccacatcaatgtgaaaattgctgatattgat
attgacctgtatccgaagaacactaacgtgattatcaaggttaatggaatggaaataccc
atcaacaacctgccgtatcaacatcccacagctaaaatccagatcagacaaaatgctgaa
ggtgtctctgtgtacgctcccagccatggtcttcaagaagtcttttttgacaaggactca
tgggcggttaaagttgtggactggatgagaggacagacctgtggactttgtggaaaagct
gatggggaaatcagacaagagtaccgcacacctaatggacgactgaccaagaacgcagtc
agctatgctcattcctgggttctgccagccaagagctgcagggacagcactgagtgtcgt
atgaagcttgaatctgtgcagctggagagtcaggtaaatctctatgaccaggaatcccaa
tgccactctgttgagcctgtactgcgctgcctgcccggctgcttccctgtgaaaaccacc
acggtcactgttggcttccattgccttcctgctgattctgccctgaatcgctctgagagt
gtgagcagcatctacgatagcagcgtggacctgaggacaacaacagaagcccacctagct
tgcagctgcactcctcagtgtgcttaa
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integrated database retrieval system