Etheostoma cragini (Arkansas darter): 117950620
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Entry
117950620 CDS
T07493
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117950620 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117950620 (arhgef18b)
Membrane trafficking [BR:
ecra04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117950620 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
PHD
Motif
Other DBs
NCBI-GeneID:
117950620
NCBI-ProteinID:
XP_034737698
LinkDB
All DBs
Position
9:complement(14139206..14182041)
Genome browser
AA seq
1678 aa
AA seq
DB search
MADSPLNNSWPSFSKLWMKRWSFKRASECKPCQSYGPPSAQICVQPHTHSVTGSSSSPSP
ASITEDVFFGSTNKDQDACSVVSDYDCPCVEVSNSVEDLLSLSSSLRDSEYFKDLQGETA
SSTVTTVLESKTLNVGLQVSLNTDSPALNQPAQTSLSTLCPQDNALVSPYYIHPAEELHQ
NFMVTQLSPKFLPGCTIDRGDSSGPAVGLSLTINLNGLLGSMEKAKGITGPEDVEEQSTM
DFDGESDLDSVPILVRSMSTSRRHSWGVPVSPINLGRRLSLDAMAMDSDGEGEDDEEGQK
CLFQSTLQDYSSTACPGEKTDDSRLRLPCPRARVTSMAGGGRHLYSRSEILATDECSRAA
HISRVVQTSKRAARAAGAEEFDPEENLHSTEGHMLMVQKVLQELKLYHGAKQRNNRPDTK
VSGNVTWYEFLNDENDEEEDRTEKVEKGTKVKRTLSSLRNRVTGSFNKDKGKNREKEQQK
EKGKEKEREAKEKACDSSRSNSHYLMPCAFSSCATCSLCSKSLQRKHGLQCMNCAVNVHK
SCKSLLAECTSSRNKRDFPLRTGSSGSPSLALKDRDREREHSGPASSQALDGHPGYHSTP
GMTISPWGPSTQYTSSTTASSLGHSLRHRNSLGSLPGEMDETDALRSKRCNEDAISLAPS
TAESIIVEDAHYAAVRADLESDAQDLEAESWSLAVDQQFVKKHSKEMVKRQDVIYELMQT
EMHHVRTLKIMLRVYVRELKENLQMDSGKLDCLFPRLENLLELHTHFLSRLKERQRENLV
TPNDRNYAINRLSDILITQFSGEIGERMKDSYGDFCSHHTEAVSYYKEQLQNNKKFQNII
RRINNLSIVRRLGVTECILLVTQRITKYPVLVERILQNTEAGSEEHEDLTRALGLIKDTI
VQVDTLVNLHEKNSRLREIHNKMEPKALGKIKDGRVFRREDLVQGRRRLLHEGTVNWKAA
SGRLKDILAVLLSDVLLLLQEKDQRYVFATVDNKPSVISLQKLIVREVAHEEKAMFLICA
SSNEPEMYEIHTNSKEERNTWMAHIRQTVESCPHTEERLFSEQEEARAFRLKEFQERLSQ
KDAVIIQALTEKLQLFADMAESVAGLEDTGSRSRLLLRGDASDLQQGEALLKGAITEVEN
LQNLLQSGVRDEAPTSRLEEGNGSGVLPRRADTFGGYDSSPTILSKNGSVKKNFSGECRN
RDRSQRASSDPQLKDLCGSHTLEQTVDESCCSPARWNSIWSNSFPEAEFFDRVLMLSQRL
YSLQAIISQQDSHIELQRASLTERASLPGRHRGNVLLEQEKQRTLALQREELANFHKLQS
QHRQEQQRWEKERERHRQQVEATEARLRQREEECRRLEVHLTEERKELESQRETYQQDLE
RLRESTRAVEKEKERLEHQKKIKRKTIEVAPLSGSLNGELLMSSGLNTSPSVSDLPLPQK
PLVRSSLSVAPADYQERPEVMLRREASSSTLPLKTEVPLHLFSTTNQQHKLVGVQQQIPT
KLAAFSSGKGKGGKIGKASHRTDSTASVDMKQMLPLKLSARDDNPLKAKRSISPHQQLPL
SAPPQSLPLHHHADQLSPPDSAGPDTQPTSTIGISHPKAPVPPAQSHSQPSIQPPSIPPH
SQSTGPLQFQPHLQPQGLSPDAQTHVQVNVHGLPHSHNMLPPYKIATEDLNKEDVIFF
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcggactctccacttaacaactcctggccctccttctccaaactctggatgaagaga
tggtccttcaagagagcatcagagtgcaagccatgtcagtcctatgggcctcccagtgcc
cagatttgtgtccagcctcatactcacagcgtgacaggatcttcctcttcaccatcccct
gcctctatcactgaagatgtgttctttggtagcaccaataaggaccaggatgcatgttca
gtagtcagtgactacgactgcccctgtgtggaggtgagcaacagtgtggaagacctgctg
agcctcagctcttctctcagagattctgagtactttaaagacctgcagggagagacagcg
tcttccacagtaactacagtcctagagagcaaaaccctaaatgttggcttacaggtgtcc
ctaaacacagacagtcctgcgctcaaccagcctgcacagacttctttgagcacactctgc
cctcaggacaatgcacttgtttccccctattacattcatcctgcagaagaacttcatcaa
aactttatggtcactcagctaagtccaaagtttttgccaggttgtactattgaccgcggt
gactcctcaggccctgcagtagggcttagcttgacaattaatctgaatggactattaggg
tcaatggaaaaagcaaaaggaataactggaccagaggatgtagaggagcaatccaccatg
gattttgatggagagtcagacctggacagcgttcccatattagttagatccatgtcaacg
tctcggaggcacagctggggtgtccctgtgtcccccatcaacctgggcaggagactgagt
ctggatgccatggccatggacagcgatggagagggagaggatgatgaggaaggacagaaa
tgtctcttccagtcaaccctgcaggactacagctccacagcatgtcctggagagaagaca
gatgactccaggctgaggctcccatgtccaagagccagggtcactagcatggctggtggt
ggcaggcatctgtactcccgctcagagatcctcgcaacagacgaatgttcccgtgctgca
cacatttctcgtgttgtgcagacatccaaacgggccgcaagggcagcaggagcagaggag
tttgaccctgaagaaaacttacattctactgaaggacatatgctgatggtacagaaagtt
ctgcaggagctaaagctgtaccatggagcgaagcagaggaacaacagaccagacaccaaa
gtttcaggaaatgtcacttggtacgagttcctcaatgatgaaaatgatgaagaggaggat
cgtacagagaaggtggagaaaggcaccaaggtgaagaggactctgagctctctaaggaac
agggtgaccggctccttcaataaagataagggtaagaaccgagaaaaagagcagcagaaa
gagaaggggaaggagaaggagcgggaggcaaaagagaaagcgtgtgacagcagcagaagc
aacagtcattatttgatgccatgcgctttctccagctgtgccacctgctcactgtgcagc
aagtccctgcagagaaagcatggcctgcagtgcatgaattgtgctgtgaacgttcacaag
agctgcaagtctctgttggctgagtgcaccagcagcaggaataagagggattttccactg
agaactggctcttcaggatctcctagtcttgccctaaaagaccgggacagagagcgggag
cattcgggcccagcctcatcacaggccttggatggccacccaggttatcacagcacccca
ggcatgaccataagtccgtggggacctagcactcagtacaccagctccaccacagcctcc
agccttggccacagcctccgtcaccgcaacagcttgggatccctccctggggagatggat
gagacagatgctctccgctccaaacgctgcaacgaagacgccatttcccttgctccctcc
actgccgagtccatcatcgttgaagatgctcactatgcagcagtgcgggctgatctggag
tccgatgcccaggacctggaggcagagtcttggagtttggcagttgaccagcagtttgtc
aagaagcactctaaagaaatggtgaagagacaggatgtgatatatgagctgatgcagacg
gagatgcatcatgtgcgaacactgaagataatgctgcgtgtgtacgtccgtgagttgaag
gagaacctccagatggactcaggcaagctggactgcctgttcccccgcttggaaaatctc
ctcgaactccacacacatttcctgtctcgtctcaaagagcgacagcgagaaaaccttgtt
acgcccaacgacaggaactatgcgatcaacagattgtcagacattctgatcacgcagttc
tcaggtgaaataggagagaggatgaaggacagctacggagatttctgcagtcaccacacg
gaggctgtcagctactacaaagaacagctgcaaaacaacaaaaagttccaaaacatcata
cggagaatcaacaacctgtccattgtgcggaggttaggagtaactgagtgtattctgttg
gtgacgcagcgcattaccaagtacccagtactagtggagcgcattttgcaaaacactgaa
gcgggttcagaggagcatgaagatctgactcgggcgctgggtctcattaaagacaccatc
gttcaggttgacacgctagttaatctccatgaaaagaactctcgactccgagaaatacac
aacaaaatggagccaaaggcactgggaaaaatcaaagatggcagagtgtttcgcagggag
gacctggtgcagggcaggagacgactgctgcatgagggcacagtcaactggaaagctgct
tctggcaggctcaaagatattcttgcagtgctcctctcagatgtgttgctcttgttacaa
gagaaggatcagcgatatgtgtttgctacagtggataacaagccgtcagtgatctctctt
cagaagctgattgtcagagaagtggcccatgaggagaaagccatgtttcttatttgtgcc
tcgtccaatgagccagagatgtatgagatccacaccaactccaaggaggagcgaaacact
tggatggcacacatacggcaaactgttgagagttgtcctcatacagaagagaggctgttc
agtgagcaggaagaggctcgagctttcaggctcaaagaatttcaagaacggctgagccag
aaggatgcagtgatcatccaggctctcactgagaagctgcagctgtttgctgacatggca
gagtctgtggcaggtctagaggacacaggttcacgttccaggcttctgcttcgaggagac
gcctcagacctccagcagggggaggccctccttaaaggagctatcactgaggtggagaac
ctgcagaacctgctgcagtcgggagtgagggacgaggctccaacctcacggctggaggaa
gggaacggctctggggttctgcccaggcgagcagatacctttgggggctatgacagcagc
cccaccatcctcagtaagaatggcagtgtgaagaagaacttttctggcgagtgtagaaac
cgagacagaagccagagagcgagctctgaccctcagctcaaagacctttgtggcagccac
accttggagcagacggttgatgagagctgctgctctcccgccagatggaacagcatctgg
tccaactccttccccgaagctgagttctttgacagagtgctgatgctctcccaaaggctc
tatagcctacaggccatcatatcacagcaggacagtcacattgagctgcagcgggcctcg
ctgacggagcgggcctccctgcccggccgccacagagggaatgtgctcttggagcaggag
aaacagcggactctggccctgcagagagaagagctggccaacttccacaagctgcagtct
cagcaccggcaggagcagcagcgctgggagaaggagagggagaggcaccggcagcaagtg
gaggccactgaagccaggctccgacaaagggaggaggagtgtagacggctggaggtgcat
ttgacagaagagaggaaggagctggagagtcagagggagacgtaccagcaggacctggag
aggctgagagagtccaccagagctgtggagaaagaaaaggaacgcctggagcatcagaag
aagatcaagaggaagaccattgaggtggctcctctgtctggcagtctgaatggggagctc
ctgatgtcctctggcctcaacacgtcccccagtgtctcggacctgcccctccctcagaag
cccctggtgcgttccagcctgtctgttgcaccagccgactatcaagagcgccctgaagtg
atgttgcggcgggaggcgagctcttccaccctgccgctgaagacggaggtgccccttcat
ctctttagcaccaccaaccagcagcacaaactggtgggggttcagcagcagatccccaca
aagctggccgcctttagcagcggcaaagggaaaggaggcaagattggcaaagcttcacat
cgcactgacagcactgcctcggtggatatgaaacagatgctgccgctgaagctgtctgcc
cgagacgacaaccccctcaaggccaagcgttccatcagcccccaccagcagctcccgctg
tcagcccctcctcagtctcttcccctgcatcaccatgcagatcaactcagtcctccagac
agtgctgggccagacacccagcccacctccactatcggcatctcccaccccaaggccccc
gtgcctccagcacagtcccattctcagccctccatccaacctccatctattcctccccac
tcacagagcaccggccccctccagttccagccccatctgcagccgcagggcctcagtccg
gacgcccagacccacgtccaggtaaatgttcacgggctcccccacagccacaacatgctg
ccaccttacaagattgccacagaagacctcaataaggaggacgtcatcttcttctaa
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integrated database retrieval system
