Etheostoma cragini (Arkansas darter): 117950638
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Entry
117950638 CDS
T07493
Symbol
ccdc50
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117950638 (ccdc50)
Membrane trafficking [BR:
ecra04131
]
Autophagy
Other autophagy associated proteins
Others
117950638 (ccdc50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
117950638
NCBI-ProteinID:
XP_034737803
LinkDB
All DBs
Position
9:13638019..13656866
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AA seq
634 aa
AA seq
DB search
MAECNVSIDKNKLPGVKEVCRDFAVLEDHCLAYNLQEQEFESHLASNVNKSRLVQKDLQV
AKKLQEEEDQRAKGHAQKQHVDIERQDNEIAYEIQEQLVRQAELQRRQEEKDAAIARKLQ
EKEMKEERRRQKQLEANFEEEYFEDHGAARRPLDLDKHTRHQSSSPIPRDAHARVTSHRD
YSPDYSSIEPKRTRYPRQDPAAPHSHFKYPEHCPVAEGGRSKHADPYPEHQLPSRGKHGD
RYPDYEPTETGRARGPDGWDTERLLRSKERPARPPLPQSVIERDETWERKRERQHDRDRG
RDLDLERHIGKEQRRDREQDLRGARTVGKDGERSRVRGLSGDRQRERDKQTQKDKERQRV
RTRSMERGLEEESGRSRDWLWEGRASWEEQGDDGERERRAGGRQHVQSGPEEVFDGPEEQ
GRGPGRERSHFHANGETGRIVHRGSGAVVVAETEYGVREATKGLAKLDVREQELKDMEVA
RKLQEEEVKVKKETRQASKMHVRAAQVAQDEEIARLLMEQEKKEYRKNRERENEREREKE
REREKGERLAMDRMAMERRRLEGDHRPNSEEVVRPRTRDEYERQRNHNKPARPPQPRAHD
YENVHSGIGYSEHPAPPRPSTRPEAAHKGAYYKR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtaacgttagcatcgacaagaataaactacctggagtgaaagaggtgtgc
cgggactttgctgtgctggaggaccactgcttggcctacaacctccaggagcaagagttt
gagagccacttggcatctaacgtcaacaagagccgtctggtgcagaaggacctgcaggtg
gccaagaagctgcaggaggaggaggatcagagggccaagggccacgcccagaaacagcat
gtcgacattgagcgtcaagacaatgagatcgcatatgagattcaggaacaactggtccga
caggcggaactacagcgacgtcaggaagagaaggatgcggctatagctcgtaagctgcag
gagaaggagatgaaagaggaaaggagaagacagaagcagctggaagcaaattttgaggag
gagtactttgaggatcacggagctgcaagaagaccccttgacctggacaaacacacccgt
caccaatccagttccccaatcccccgtgatgcacatgctcgagtgacctcacatcgtgat
tactccccagattatagctcaatagagcccaaaaggaccaggtacccaaggcaggaccca
gcagcaccccacagccacttcaaataccctgaacactgcccagtggcagaaggagggcga
agcaagcacgcagatccgtacccagagcaccagctgccttctagaggcaagcatggggac
aggtacccagattatgagcccacagagactggaagagccaggggtccagatgggtgggat
acagagagattgttgagaagcaaggagagaccagccaggccacctctaccacagagcgtc
atagagagagacgagacctgggaaagaaaaagggagaggcagcatgaccgagacaggggc
cgagacctggatttggagaggcatataggaaaagagcagagaagagacagggagcaggac
ctcaggggagcgagaacagtaggaaaagatggggaaagatccagagtaagaggattgagt
ggggacagacagagagagagagacaagcagacacagaaagacaaagagagacaacgagta
agaaccaggagcatggagaggggacttgaagaggagtcagggcggagcagggactggcta
tgggagggcagggcttcttgggaggagcaaggggatgatggtgagagggagcggagggcc
gggggccggcagcatgtccagtctggccccgaagaagtgtttgatggtccggaagagcag
ggcaggggtcctggcagggaacgcagtcattttcacgccaatggagagacaggtcgtatt
gttcatcgagggagtggagcagtagtagtagcagaaactgagtatggagtgagggaggcc
accaaggggttggcaaagctcgatgtccgtgagcaggagctgaaggacatggaggtggcc
aggaaactgcaagaagaggaagtcaaggtgaagaaggaaaccagacaagccagcaagatg
catgtgcgtgcagcccaagtggctcaggatgaggaaattgcccgactgctgatggaacaa
gagaagaaggagtacaggaagaatcgagagcgggagaatgagagagagcgggagaaagag
agagagcgagagaagggggaaaggttggccatggataggatggcaatggaaagaaggcgg
ctagagggagaccacaggccaaactctgaggaagtagtccggcccagaacccgagatgag
tatgaaaggcagaggaaccacaacaagcctgccaggcctcctcagcctcgcgcacacgac
tatgagaatgtgcactctggcattggctactcggagcaccctgccccccctcgaccttcc
accagacctgaggctgctcacaaaggtgcctattacaagcggtga
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