Etheostoma cragini (Arkansas darter): 117950686
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Entry
117950686 CDS
T07493
Symbol
cdh15
Name
(RefSeq) cadherin-15
KO
K06809
cadherin 15, M-cadherin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117950686 (cdh15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117950686 (cdh15)
Cell adhesion molecules [BR:
ecra04515
]
Cadherins
Major cadherins
117950686 (cdh15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Big_9
He_PIG
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
117950686
NCBI-ProteinID:
XP_034737882
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All DBs
Position
1:16296169..16313284
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AA seq
793 aa
AA seq
DB search
MAVHMLMVCVLGALLCQMWSSAEVEALYPWRNQGKGLVRVKRDWIIPPIRVLENSKQVPE
NLVQIKSDKIFTGEVIYKLEGPGVDQEPKNLFEIDDKTGVIRSKRPLDRERHNSFTLKAF
ALSTSGERLENPSTIEIVVLDQNDNRPAFTQSQFGGSVSEFSVPGTSVMSVSATDADDPM
TENAFLSYSITGQESIPANAVTKTMFGINNETGAIYTRDVGLDREVVKGFRLKLQVADMG
GMGLTSEGVAIIHISDINNHAPQFSPALYSMTAVENREDYEIGRVNVTDRDDRGTGNWEG
KYFISNDPEGLFAISTDPATNEGVLTVVKPLDYEAMDEYSLILTVENVNPLSNKAPNLPM
STATVVVTVVNENEAPHFREDPIQIVVPESVVPGTLLKSNIAFDPDNSDLRYEISRDPER
WLDINRATGDITAKRTFNMQSPNVRNNIYNAVVKVTDAGGVSTTATVAITLKETNDFPPQ
LFPLSGTVCGDAGHRSSGLIVTAVDKDLPPHAAPFTFEMPDDLSINWTVIQVNHTHAVLQ
SLLELEAGEYVVTVFVADSGSPVLSTYAQVNVTVCLCDSFGDCKSEAVAVLGSSVGIGFI
ALIIIMASIALLLLLLLLAVAVTSCGRRHHIKKGTGLLVGESEDDIRDNVFNYDEQGGGE
EDENAFNIDLLWNPHDAPSTPGSYYPGSGVPRGKQPLRKDAPHNLPSPIYPRRPTADPTD
IEDYINDGLEAADNDPNVPPYDTALIYDYEGEGSLAGSLSSIASGSSDEDQDYDYLNNWG
PRFQKLANMYDPR
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacacatgttgatggtgtgtgtgctgggtgctctgctttgtcagatgtggagc
tctgcagaagttgaggccctttatccatggagaaatcaaggcaagggattggtcagagtg
aagagggactggatcattcctccaatcagagtgctggagaatagcaagcaggttcccgaa
aaccttgtccagatcaaatcggacaaaatcttcacaggtgaggtgatctacaagttagag
ggacccggggtggaccaggagccaaagaatttgtttgagattgatgataaaacaggagtg
atcaggagcaagcggccgctggacagagagagacacaacagcttcacgctcaaagccttt
gcgctgtcaaccagtggagagagactagagaatccgtccaccatagagatagtggtgctg
gatcagaacgacaacagacctgcctttacccagagccagtttggtggcagtgtctctgag
ttctcagtcccaggcacctcagtgatgtccgtgtcagccactgatgcagatgacccaatg
acagaaaacgctttcctgagttactccatcactggccaggagagcattcctgccaatgct
gttaccaagactatgtttggtatcaacaatgagacaggagccatctacacaagagatgta
ggcctggaccgagaggtggtgaaaggtttccgattaaaactgcaggttgctgatatgggg
ggcatgggactaacaagtgagggtgtggctatcatacatatatctgatatcaacaaccac
gccccacagttcagccctgccttgtacagtatgacagcagtggagaacagggaggactat
gagattgggcgggtgaatgtgacagacagagatgatcgtggaacaggaaactgggagggc
aaatacttcatttccaacgaccctgaaggcctctttgccatcagtacggatcctgccacc
aacgagggcgttctgacagtggtgaagcctctggattatgaagcaatggatgagtattcc
ctgattctgacggtggaaaatgtcaatcctctgagcaacaaggctcccaaccttccgatg
agcaccgctacagtggtggtgactgtcgtgaacgagaatgaagctcctcatttcagggag
gaccccatacagatagtggtccctgagtctgtagttcctgggactttactgaagagcaac
atcgccttcgaccctgataactctgacctgaggtatgagatcagtagagatcctgagagg
tggctggacatcaacagagctacaggagacattactgccaagagaacctttaacatgcaa
tcaccaaatgttagaaacaatatctacaatgctgtagtcaaggttacagatgcaggtggt
gtgtcgaccacggccacagtggccatcacactgaaggagaccaacgacttcccccctcag
ctcttccctctgagtggcacagtctgtggggatgcaggccacaggagttctggtctgatt
gtgactgctgtggataaagaccttcctccgcacgctgcacccttcacctttgagatgcct
gacgatctgtccatcaactggactgttattcaagtcaatcatactcatgctgtgcttcag
tccctcctagaactggaggcgggagagtatgtggtcacagtgtttgtagcagactctggc
agcccagttctgagcacttatgctcaggtcaatgtcaccgtgtgtctctgtgactccttt
ggagattgtaagtctgaggcggtggctgtcctaggctccagtgtgggaatcggcttcatc
gctctcatcatcatcatggccagtattgcactcctgctactgctgctcctcctggctgtg
gccgtgacctcctgtgggagacgccaccacatcaagaaaggaaccggtctgcttgtcggg
gaatcagaagatgacatccgtgacaatgtttttaactatgatgagcaaggcgggggtgag
gaggatgagaacgcctttaacattgacctgctgtggaatccccacgatgccccttcgacc
cccgggtcctactatcctgggtctggtgttccccgaggcaagcagcccctgaggaaggat
gccccgcataacctgccctcacctatctacccacggaggcctacagcggatcccactgac
atcgaggactacatcaatgatggcctggaggctgccgacaacgatcccaacgtgcccccg
tacgacacagccctgatctatgactatgagggcgagggctcactggcaggcagtctcagc
tccattgcttcaggcagctcggatgaagaccaagactatgactacctcaacaactgggga
ccacgctttcaaaaactggccaacatgtatgacccacgttaa
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