Etheostoma cragini (Arkansas darter): 117950715
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Entry
117950715 CDS
T07493
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117950715 (hmg20b)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
117950715 (hmg20b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
HRI2_3H
MlaC
Beta-Casp
Motif
Other DBs
NCBI-GeneID:
117950715
NCBI-ProteinID:
XP_034737932
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All DBs
Position
9:18065086..18077571
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AA seq
294 aa
AA seq
DB search
MGGIKQEQSDASQHSKPSHSSDQPQEEPKKRGWPKGKKRKKVLPNGPKAPVTGYVRFLNE
RREHMRARYPDLPFPEITKRLGSEWTRLAPNDKQRYLDEAEREKMQYAQELKEYHQTEAY
QITSAKIQDKRIKKEDTPSVIISTSSESSVSKASDLTSRFDIPIFTEEFLDQNKAREAEL
RRLRKANIEFEEQNAVLQRHIKDMYNAKERLEAELGLDEKRTHALHQHLLAIKHTLVNSL
SSVPLPGTGETASHGNLDSYLSRLSGVLEGNPHKHRALFTQLCEVLSHVDSEKL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgggagggatcaaacaagagcagagtgatgcatcgcagcactccaaaccatcccattca
tcagatcaaccacaagaggagccaaagaagagaggctggccgaagggaaagaaaagaaag
aaggttctaccaaacggtcccaaggcaccggtaactggatacgtccgcttcctgaacgaa
cgccgggaacacatgcgggccagataccctgacttacctttccctgaaatcaccaagcgt
cttggatcagagtggacacggctagccccgaatgacaagcagcgctacctggacgaggcg
gaacgggagaagatgcagtatgcccaggaactgaaggaatatcatcagactgaggcctat
cagatcaccagtgctaagatacaagacaagaggatcaagaaagaagacactccatcggtc
atcatcagtactagttcagagtcatctgtatcaaaggcttcagacctaacgagcagattc
gacatccctatcttcacagaggagttcctcgatcagaacaaagctagagaggccgagttg
cgacggcttcgtaaggccaacattgagtttgaggagcagaatgcggtgcttcagcggcac
attaaggacatgtacaatgctaaagagcgcttggaggctgaactggggctggacgagaag
cgtacccacgctctccaccaacatttgctggctattaaacacacactggtcaacagtctg
tcatcagtccccctgccaggtacaggcgagacagcatctcatgggaacctggactcatac
ctcagtcgcctcagtggagtgctggagggaaaccctcacaagcaccgtgcactgttcacc
cagctttgtgaagtcctttctcatgtggacagtgagaagttatga
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