Etheostoma cragini (Arkansas darter): 117950726
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Entry
117950726 CDS
T07493
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117950726
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117950726
Transporters [BR:
ecra02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
117950726
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
117950726
NCBI-ProteinID:
XP_034737961
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Position
1:complement(15856565..15862653)
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AA seq
600 aa
AA seq
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MTFHVEGLVAIAVFYLLILFVGIWAAWKNKHSGEAEGTDRSETIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEYVYLPDYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDPF
QQKYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIVDMDIKVSVVISALIAIFYTLV
GGLYSVAYTDVVQLFCIFIGLWISVPFALTNPAVSDITVTAVRQVYQSPWRGSIQKSDTW
VWIDNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCLVMAVPSVLIGAIGAST
DWNQTTYGAIPPKEKDQADMILPIVLQHLCPPFVSFFGLGAVSAAVMSSADSSILSASSM
FARNIYQLAFRQSASDREIVWVMRITIFVFGGLATLMALVTGTVYGLWYLSSDLVYVIIF
PQLLSVLFVKGTNTYGSVAAYLCGMVLRIGGGEPYLRLPPFIYYPGWTTEQRIHHITGEM
EDVVIQKFPFKTVSMLASFLGNVAFSYLAKYLFESGRISHKYDFLDAVVSRDSGEIMDRT
TLVTRSNNIGLSEMAPVKPRLSVTLAAAFMRRDTLQAETVEEEEEEEEESSPDSSHHDKK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaccttccatgtagaggggcttgtggctatcgcggtcttctatctactgatcctgttc
gtgggcatctgggcggcatggaagaacaaacactccggggaggcggagggcaccgaccgc
agcgaaaccatcatggtcggaggaagagacattggattatttgtcggtggatttaccatg
acagcgacctgggttggaggaggatatatcaatggcacagctgagtatgtgtatctgcct
gattatggcttggcttgggctcaagctccctttggatatgccctcagtcttgttgtgggt
ggtcttttttttgccaagcccatgcgctctcgaggttacgtcaccatgttggacccgttc
cagcagaagtatgggaaacgcatgggtggcctcctcttcatacctgcactcatgggtgag
atcttctggtccgctgccatcttatccgcccttggtgctaccctgagtgtgatcgtggac
atggacattaaggtctcagtggtcatctcagcactcattgcaatcttttacactctggtt
ggaggactttactctgtggcctacactgatgttgtccagctcttctgtatatttattggc
ctgtggatcagtgtcccttttgctttgaccaaccccgcggtgtcagacattaccgttact
gcagtgcgacaggtgtaccagtcgccctggagaggcagcatccagaagagtgacacctgg
gtctggatcgacaacttctgcctcctgatgcttggaggaataccctggcaggtgtatttc
cagagagtcctgtcggcctcctcggccacctacgcccaggtcctctccttcctggccgct
ttcgggtgcctcgtcatggctgtgccctccgttctcatcggcgccatcggggcctccaca
gactggaaccagacaacctatggtgccattcctccaaaagagaaggaccaagcggacatg
attctacccattgtgctccaacacctctgccccccatttgtctctttcttcggcctgggt
gcagtgtctgcagctgtcatgtcatctgctgactcctccatcctttcagcgagctccatg
tttgcgaggaacatctaccagctcgcctttagacagtcggcatccgaccgtgagattgta
tgggtgatgcgtattacaatctttgtgttcggcggccttgccacgttgatggcgctggtg
accgggacagtttacggcctctggtacctgagctcagacctggtttacgtcatcatcttc
ccccagctgctcagtgtgctctttgtcaaaggcaccaacacgtacggttctgtggccgcc
tacctatgtggaatggtgctgcgtataggtggaggtgaaccctacctgcgtctgcctcct
ttcatttactaccctggctggaccacggagcagaggatacaccacattactggagaaatg
gaggacgttgtcatccagaagttccccttcaagaccgtctccatgttggcctctttcctg
gggaacgttgcgttctcctacctggcaaagtacctgtttgagagcggcaggatttcacac
aagtacgactttctggatgcagtggtgtccagggacagtggcgagattatggataggacg
acgcttgtgactcgcagcaacaacatcgggttgtcggagatggcgcctgtcaaacctcgg
ctgagcgtgaccttggcggctgccttcatgcgccgcgacacactgcaggcagaaacagtg
gaggaggaggaggaggaggaggaggagtccagccctgattcctcccaccatgataaaaaa
tga
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