Etheostoma cragini (Arkansas darter): 117950786
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Entry
117950786 CDS
T07493
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117950786 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117950786 (prpf38a)
Spliceosome [BR:
ecra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117950786 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
117950786 (prpf38a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
117950786
NCBI-ProteinID:
XP_034738017
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All DBs
Position
9:complement(583858..588230)
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AA seq
170 aa
AA seq
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MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTDIHFAAVNRDLKPLISS
PGGADLQRDEARRPGETAIAARAPGAIAAAPETDATAPNPQVTTGATDTAATPSPLRGVQ
RRVTRRVEEETSDLPFPFIPFPPFFVPSILQMWFLLQVIWVLEVVPLTCL
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagaaccgttaaagatgccaacagcatacacgggaccaacccgcagtacctg
gtggagaagatcatccggacccgaatctacgagtcaaaatactggaaggaggagtgcttc
ggtctcaccgatattcactttgcagcagtaaatcgtgaccttaaacctctcatttcctcc
ccaggaggagcagatctccaaagagacgaagcccgtcgccccggagagaccgccatcgca
gcaagagcccccggcgccatcgcagccgctccagagacagacgccaccgctccaaatccc
caggtcaccaccggagccacagacaccgcagccactccaagtcccctgagaggagttcaa
agaagagtcacaagaagagtcgaagaggaaacgagtgatctcccttttccttttatacct
tttcctcctttttttgtaccttcgatcctgcagatgtggttccttctccaggtgatttgg
gttttagaagtggtccccctcacctgtctgtaa
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