Etheostoma cragini (Arkansas darter): 117950838
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Entry
117950838 CDS
T07493
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117950838 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117950838 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
ecra04131
]
117950838 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117950838 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117950838 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117950838 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
117950838 (si:dkey-110c1.10)
Membrane trafficking [BR:
ecra04131
]
Others
Actin-binding proteins
Myosins
117950838 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117950838 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117950838 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117950838
NCBI-ProteinID:
XP_034738073
LinkDB
All DBs
Position
9:complement(18120820..18141090)
Genome browser
AA seq
1654 aa
AA seq
DB search
MTSLELYSKGACVWIPDPDAVWVSALLLQDYSPGEKHLLLQLSNGKETHYPVASHSDLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEEKVLASNPILESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMKT
YLLEKSRVVFQASAERNYHIFYQLCASRELPEMRGLKLDAPEHFRYTSQGGEMQIPGTDD
LSDLERTRNAFTILDVQPDQQMELFRILSAVLHLGNVNIQASGRSSDRSYIDADDHSLAV
FSKLLGVEGPQMAHWLCHRKLAVGGEMLVKPVSGQQAIEARDALAKHVYGQMFAWVVQRL
NSALRTQRGRTKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYV
REELTWSRIEFSDNQQCINLIEGQLGLFDLLDEECRMPKGSDESWVQKLYDQHLTKKPHP
HFQKPRMSNSAFVVLHFADTVQYECNGFLGKNRDTVFEELINILKASQSELVAELFHQQG
NVSSVANGSVRSGKRATKEHKLTVGFQFRQSLQMLMDTLNSTTPHYVRCIKPNDLKEPFM
FDPRRTVQQLRACGVLETIRISAAGFPSRWTYEEFFSRYHLLLRISQDQDQAQGSCRQAL
PQLIPDPDQYCFGKTKVFFRAGQVAVLERLRAERLRVAAVNIQSRVRGWLARIRYTRICL
ATVTIQRYCRGALARRLALTLRYTKAALIIQKTYRMVMVRQLFLMIRQATTTIQAFTRGT
MARRRYRLLVVERAAVLLQARVRGWLARQAYRRVHSAVVFMQCCVRRRAARRELMKLKTE
ARSVEKYRMLNKGMEVKLMQLQLRADQEARESAALRETLHAEREATSAELVALRATVQKL
ERQKQEKPQPCIVISEKKVEERRRAEEKASQEILQLTQELEALQREKDRFCKDREDLSAR
LFEQEKAQEECVRQAVSQAGASLRAALDEERRKYQGLLRDFTRLEQRYDNLREMSLLTES
TKGHRRTDSTQSLSLEPLSPSPTALSPQSFNPLFPFPSAFSSPEEVRRVSVTPPSLERRA
SVWSLETPMDKLMERMDVAKDPAVKMKGEDLAHAYDAVRVANKFLESQLRSQRSQREEEL
EALRCQLSQAISGSSSDGQRQELQELLEAREQECVRLRRELKELKNTVSLRRLLTQAFTQ
ETPSQPKPATVTGLLECRKRDETKLIKNLITDIRVDSALSLPPGLPASVLFLCVRQADCS
GDQTHARSLCSAAVTAIKAALKKHSNDVDMTALWLKNALLLHDLLTQHSPKQTLDSDELV
PLTADLSDLIRTLSDLCIQAYQQLLSITEKRLQNIIVPALLESETIPGLSGSAVKLGTSR
KRAGSDPRTVGGDAPTMAAVLRELGALHTALSHQALPPSQMEQAFHQLTYLISASALNSL
LLRKDMCCWSRGMQIRYNVSLLEEWLRSRGLQTGGAVVTLEPLIQAVQLLQAGKKTESDA
QALVQTCTALSSQQIVKILTLYSPHSDLDERVTLNFIRTVQGLLKGRSDGQPPQLLMDVR
RVFPVTFPYLPPPALHAEQLVIPDCLKISFLRRA
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgacatcactggagctatacagcaagggagcatgtgtgtggattcctgacccagatgca
gtttgggtgtcagccctgctcctccaggactacagtcctggagagaaacatctactatta
cagctctctaatggaaaggagacccattatccagtggcgtcccattctgatctcccaccg
ctggggaaccccgatatcctggagggggaaaatgacctgacagctctcagcttccttcat
gaacctgctgtcttgcacaacctgcgagttagattcctagactacagcagcatctatacg
tactgtggtattgtgttagtggccatcaatccctatgaccagctccccatatatggagag
gaggtgatcgatgcttacagtggccaggacatggccgacatggaacctcacatcttttct
gtggccgaggaagcctaccgcactatgaccagggaggagaaaaaccagtctatcatcatc
agtggagagtctggctcaggaaaaacggtctcggccaaattcaccatgcgatactttgct
gtggttggaggagcagcacagcagaccagtgtggaggagaaggttttggcttccaaccct
atattggagtcgattgggaatgctaaaaccacacggaatgacaacagtagtcgttttggg
aagtacattgagatcggctttggcagaaaaggggacatcattggggcaaacatgaagacg
tatctgctggagaagtcaagggttgtcttccaagcatcagcagagaggaactaccacatc
ttctaccagctgtgtgcctccagggagttacctgagatgagaggccttaaactggatgca
cctgagcatttccgctacaccagccagggaggagagatgcagattcctggtactgatgat
ctgtcagacctagagcgtactcgcaatgcttttaccatcctggatgtgcagcctgaccaa
cagatggagctcttccggatcctgtcagctgttctgcaccttggaaacgtcaacatccaa
gccagtgggagaagttctgaccggagttatattgatgcagacgaccactctctggctgtc
ttctccaagctgttaggagtggaaggacctcagatggcccactggctgtgtcatcgcaaa
ctggctgtaggtggagagatgctggtcaaacctgtgtccggtcagcaggccatagaagcc
agagatgcactggccaaacacgtttatgggcagatgtttgcatgggtagtccagaggctc
aactctgctctgcgcactcagaggggacggaccaaatcctttataggcgtactagacatc
tatgggttcgagacctttgaccggaacagttttgaacagttctgtataaattatgcaaat
gaaaaactgcaacagcaattcaacaggcatgtgttccacttggagcaggaagagtacgtc
cgggaagagctgacctggagtaggatcgagttcagtgacaatcagcagtgcatcaatctc
atagagggacaactgggcctgtttgatcttttagacgaggagtgcaggatgcccaaaggt
tcagatgagagctgggtgcagaagctgtatgaccaacatctgaccaaaaagccccaccct
cacttccagaaacctcgcatgtccaacagcgccttcgtcgttctgcacttcgcggacaca
gtgcaatatgaatgcaatggctttttaggcaagaatcgagatacagtctttgaagagctc
attaacattctcaaagcaagtcagtctgagctggtggctgagttgttccatcagcaggga
aatgtttcctctgtggctaatggaagtgttcgttcaggtaaaagagccaccaaagaacat
aaactgacagtaggcttccagtttcgtcagtccttacagatgctaatggacactctgaac
agcaccactcctcactatgtccgctgtattaaacccaacgacctaaaagaaccttttatg
tttgaccccaggaggacagtccagcaactgagagcctgtggggtgctggagacaattcgc
atcagtgctgcaggttttccatccagatggacctacgaggaattcttcagcagataccat
cttctgcttcgaatttctcaggaccaggatcaggcccagggctcgtgcagacaagccctg
cctcagctcatcccagacccagaccagtactgctttggaaagaccaaagtatttttccgg
gccggtcaggtggctgttctggagaggttgagagctgagaggctgcgtgttgctgctgtg
aacatccagagccgggtcagaggatggctggcacggattagatacaccaggatctgcttg
gctaccgtcaccatacagagatactgcagaggcgctctggccagacgcctggccctgacc
ctgcgctacaccaaggctgctttaataatccagaagacctaccgcatggtgatggtcaga
cagctgttcctcatgatccgacaggccaccaccaccatccaggccttcaccaggggcacc
atggcacgccgcagatacagactgttggtggtagagcgggctgctgtattgcttcaggcg
agagtgcgtgggtggttggcgaggcaggcgtacaggcgagtacattcggcggtggtgttc
atgcagtgctgcgtgcgccgcagggctgccaggagagagctgatgaaactaaagacggag
gcccgctcagtggagaagtacagaatgctcaacaagggcatggaagtcaaactgatgcag
ctgcagttgagggcagaccaggaggccagggagagtgcagctttgagagagaccctgcac
gcagagcgagaggccaccagtgctgagctggtggctctgagggccacggtacagaaacta
gagagacagaaacaggagaagccacagccctgcattgtcattagcgagaagaaggtggag
gaaagaaggagagctgaagaaaaggcttcccaggagatccttcaactcacacaagagtta
gaagccctacaaagagaaaaggaccgtttttgcaaagatagagaggatctctctgctcgc
ttgtttgaacaagaaaaagcacaagaagagtgtgtgcgtcaggctgtgtctcaggcgggt
gcatctctgagggcggcgctggatgaggagaggagaaagtatcagggtctcctgagagac
ttcaccagactggagcagagatacgacaacctcagagagatgagtctgcttactgagagt
accaaaggccacagaaggacagactccacccagagtctgagcttggagcctctctctccc
tcccccactgcgttgtcaccccagtcttttaacccacttttccccttcccatctgccttc
tcttccccggaggaggtccgcagggtcagtgtgactcctccctcgttggagaggagagcc
tcagtgtggagcttggaaacgccaatggataagttgatggagaggatggatgtggcgaaa
gacccggcagtgaagatgaaaggagaggacctggctcacgcttacgatgctgtacgagta
gccaacaagtttctggagagccagctgcgtagtcagcgcagtcagagagaggaggagctg
gaggctctgaggtgccagcttagtcaagcgatctctggttcttcctctgatggacagcga
caggaactgcaggaactactcgaggccagagagcaagagtgtgtcagattgagaagagag
ctgaaggagcttaaaaacacagtctcactcagacgactcctgacacaagctttcacccaa
gagacaccctcccaaccgaagccagcaacagtcactggtttgctggaatgtaggaagaga
gatgaaaccaagctcatcaagaaccttatcacagacatccgtgtggacagcgccctgtct
ctgcctcctggcctacctgccagcgtgctcttcctgtgtgtccgtcaggccgactgcagc
ggagaccaaacgcacgcccgctcgctctgtagcgctgctgtcactgctataaaggcagct
ctgaagaaacatagtaacgatgtagatatgacagctctgtggcttaaaaatgccttactg
ctgcatgacctgttgacccagcactccccaaaacagacactcgactcagacgaactggtc
ccattgacggctgatctgagtgacttgatccgcaccctgagtgacctctgcatccaggcc
tatcagcagctcctctccatcactgaaaaacgcctacagaacatcatagtccctgctctg
ttggagagcgagaccatcccaggtctgtctggatcggcagttaaattgggaacgtccaga
aagcgagcaggttctgaccccaggactgtgggaggtgatgctcccacaatggcggcagtg
ctgagggagctaggagcccttcacaccgctttgtcccatcaggctctgcccccgtcacag
atggagcaggccttccaccagctcacctacctcatctctgcctccgctctcaacagcctg
ctgctgaggaaagacatgtgctgctggagtcgtgggatgcaaatacgctacaatgtgagt
ctgctggaggagtggctgcggagccgaggcctgcagacagggggcgctgtggtcacactg
gagcccctcatccaggcggttcagctgctgcaggctgggaaaaagactgagtcggatgca
caggcccttgttcagacctgcactgccctttccagccagcagatagtgaagattctgacc
ctctacagtccccacagtgacctagatgaaagagtcacactgaattttatccgtactgtc
caggggcttcttaaaggccgttctgacggtcagcctccacagctcctcatggatgtgaga
cgagtgtttcctgtcacattcccctacttgcctcccccggccctccatgctgagcagtta
gtcatcccagactgcctcaagatctcttttctacgcagagcctag
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integrated database retrieval system