Etheostoma cragini (Arkansas darter): 117950840
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Entry
117950840 CDS
T07493
Symbol
cachd1
Name
(RefSeq) VWFA and cache domain-containing protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCache_1
VWA_N
VWA_2
VWA_3
DUF6744
NAS
Motif
Other DBs
NCBI-GeneID:
117950840
NCBI-ProteinID:
XP_034738075
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Position
9:6864080..6945714
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AA seq
1308 aa
AA seq
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MARRTGEKPLGSTPNTRAAFRDQHLRFHGGLLAFSWSFVLMCSVLSCGYCGAETEFSILE
EVQVLADQMKKLSSQELGVFTMQRIFNSFVYTEKTSNGETEVQQLAKKIREKFNRYLDVV
NRNKQVVEASYTAHLTSPLTAIQDCCSIPASMMEFDGNFNTNVSKTICCDRLSPNVNSRA
FNPGRDLNSVLADNLKSNPGIKWQYFSSEEGIFTVFPAHKFQCKGSYEHRSRPVYVSAVR
PQSKHIVVMVDHGASVTDTQLQIARDSALVILNAVDEHDKISILSVAEMVRFCSLDQCYK
SLLSPATSETKRKMSTFISNIKASDGATLHAAGFQKAFQLLRNTSSLCKQTTDMVIIYLS
SGITSRESSEQEKRATLAVVREENRYLNNSVMILTYALMNEGVTGLKELAFLRDLAEQNS
VKYGVDRTSDRERLFAASSSGSAGASMMPVVKGSMMVLNQLSNLETTVGRFYINLPNRMI
DLARFSLPYTDPMGDGFIMTVSRPCYFGNLLLGVVGVDVNLAYILEDVTYYQDSLASYTF
LIDNKGYTLMHPSLTRPYLMTEPPLHTDIIHYENIPGFPVVRQNILSLPLGSQVISVPVN
SSLSWHTNRLRDNSKEAYNVSYAWKLVQDTSFILCIVYVQPEIPVKHLKNLNTAPSSKLP
YHRLDLLGQPSSCLHFKQLSTVESPTVMLAAGSFSSPYEHLSQPETKRMVEHYTAYLSDN
TRLIANPGLKSSVRNEVMATSHVTDEWMTLMEMSSLNCYIVRRYIATPSGVLRIYPGSLM
DKAFDPTRRQWYQHAVANPGLITFTGPYLDVGGAGYVVTISHTIHASSSQMAPGYAVAVM
GIDFTLRYFYKVLLDLLPICNQDKGNKIRCFIMEDRGYLVAHPTLIDPKGHAPAEQQHIT
HKEPLVANDILNHPNFVKKNLCNSFSDRTVQRFYKFNTSIMGDLTNLVHGSHCSKYRLTR
IPGTNAFAGIVNETCDSLAFCACSTVDRLCLNCHRMEQNECECPCECPLEVNECTGNLTT
AENRNPSCEVHQEPVSLNVIDPSLHDTLPQCINTRCSQRYTSSDCFGVLDCEWCMVDSDG
KTHLDKPYCALQKECFGGIVGAKSPYADGPGAVDEEVASLNMIKSAPVGPVAGGIMGCIM
VLVLAVYAYRHQIHRRSHQHMSPLAAQEMSVRMSNLDNERDERDEDSHEDRGIISNTRFI
AAVIERHTHTPERRRRYWGRSGTESDHGYSTMSPQEDSENPPGNNDPLSAGVDVGNHDDD
LDLDTPPQTAALLSHKFHPYRHTHTHHHPLHTHHLQAAVTVHSVDAEC
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggcggacgggggagaaacctctgggttcgacgccgaatacgcgcgctgctttc
cgggatcaacaccttcggtttcacgggggcttgttggctttttcgtggagcttcgtttta
atgtgctcggttctgtcttgtggatattgcggagccgaaacggagttttccatcctggaa
gaagtgcaagttttggccgatcagatgaaaaagctgtcttcacaggagctgggagtcttt
actatgcagaggattttcaactcgtttgtgtatactgagaagacatcaaacggagagaca
gaagtgcagcagttggccaaaaagatccgagaaaagtttaaccgctacctggatgtggtg
aaccggaacaaacaggtggtggaggcctcgtacaccgctcacctcacctctccgctcact
gcgatacaggactgctgctccatacctgcatctatgatggagtttgatggaaacttcaat
accaacgtatccaaaaccatctgctgtgatagactttcccccaacgtcaacagccgagct
tttaaccctggacgggacctcaactcagttttggcagacaacctgaagtccaacccgggg
ataaagtggcagtacttcagctcagaggagggcatctttacagtcttccctgcccacaag
ttccagtgcaagggaagttacgagcaccgcagcaggcctgtgtatgtgtctgcggtgcgt
ccccagtctaaacacatcgtggtgatggtggaccacggagcgtctgtaactgacacccag
cttcagatcgccagagactcggcactggtcatcctcaacgctgtagatgaacatgacaag
atctccattttgtcagtggcagagatggttcgcttctgttctctggaccagtgctataag
agtctgctctctccggccaccagtgagaccaaaaggaagatgagcaccttcatctccaac
atcaaggcatctgatggagccacactgcacgcagccggcttccagaaggccttccagctg
ctccgaaacaccagcagtctctgcaaacagaccacagacatggtgatcatctacctgtcg
tctggtattacatctcgggagtcgtcggagcaggagaagagagcgacgctcgctgtggtc
agagaggagaaccgatacctcaacaactctgtgatgatcctcacatacgctctcatgaac
gagggagtaacaggcctcaaggagctggccttcttgagggatctcgcagagcagaactcg
gtgaaatacggcgttgacagaacttccgaccgagagcgcttatttgcggcatcctcgtcc
ggatcagctggagcttccatgatgccggtggtgaagggtagcatgatggtgctaaaccag
ctgagcaacctggagacaacagtgggccgtttctacattaacctgcccaatcgcatgatc
gacctggcccgcttcagcctgccctacactgaccccatgggagatgggtttatcatgacc
gtgagccggccgtgttatttcgggaacctgctcctgggcgtggttggggtggatgtgaac
ctggcctacatcctggaggacgtcacctactaccaagattcactagcttcttacacgttc
ctcatcgacaacaaaggttacaccctgatgcatccgtcactgacacgcccttacttgatg
accgagcctccccttcacactgacattatccactacgagaatatcccaggattccctgtt
gtccggcagaacatcctcagcctccctctgggcagtcaggtcatttctgtcccagtcaac
tcgtctctgtcctggcacaccaaccgactccgtgacaacagcaaagaagcatacaacgtc
agctacgcctggaaactggttcaggacacttcttttatcctgtgcatcgtgtatgtgcag
ccggagatcccagtgaagcatctgaagaacctgaacacagctcccagctccaagctaccg
taccatcgcttagacctgctcgggcagcccagctcctgcctgcacttcaagcagctctcc
acagttgagtcccccactgtgatgttggcagccggtagtttctcctctccctatgagcac
ctcagtcagccagaaacaaagcgcatggtggagcattacaccgcctacctgagtgacaac
accaggctcatagccaacccaggcctcaagtcctctgtcaggaacgaggttatggcaacc
agtcacgtcacggatgagtggatgacactaatggaaatgagtagcctcaactgctacatt
gtgcgccgttacatagcaacgcccagtggggtgctccggatttacccaggatcactaatg
gacaaagcctttgaccccacccgcagacaatggtaccagcatgccgtggctaaccctggc
ctcatcaccttcacgggaccgtacctggatgtaggcggggcaggctacgtcgtcaccatc
agccacaccatccatgcctccagctctcagatggccccaggttatgcagttgcagtgatg
ggtatagacttcactctacgctacttctataaggtcctactggacctgcttcccatctgc
aaccaggacaaaggaaacaagatcaggtgcttcataatggaggacagagggtacctggtc
gctcaccccactctcattgaccccaaaggtcacgcccctgcagaacaacagcacatcaca
cataaggagccactggtggctaacgacatcctgaaccaccctaactttgtcaagaaaaac
ctatgtaacagcttcagtgatcgcaccgtgcagcgcttttacaagttcaacaccagcata
atgggggaccttaccaacctggtccatggtagccattgttccaagtaccgtctgacccgg
attcccggcactaacgctttcgctggcatcgtcaacgagacttgtgactctctggcgttc
tgcgcctgcagcaccgtggaccggctctgtctcaactgccacagaatggagcagaatgaa
tgtgagtgtccatgtgaatgccccctggaggtgaatgagtgcaccggcaacctcaccact
gctgaaaacaggaaccctagctgtgaggtgcaccaggagccagtcagtctgaatgtgatt
gatcctagtctgcatgacaccctgccccagtgcatcaacactcgctgtagccagagatac
accagcagtgattgtttcggcgtgttggactgtgagtggtgcatggtggacagtgatgga
aagactcatctcgacaagccgtactgtgccctgcagaaggaatgtttcgggggcatcgtc
ggcgccaagagtccttatgccgatggccctggagccgtagatgaggaggtggcatctctg
aacatgatcaagagtgcacctgtgggtccggtcgccgggggcattatgggatgcatcatg
gtgttagtgctggctgtgtacgcgtacagacaccagatccacaggcgttcgcaccagcac
atgtccccactggcagcacaggaaatgtcagtgagaatgtccaacctggataacgaaaga
gacgagagggatgaagacagccatgaggacagaggaatcatcagtaacactcgattcatc
gccgcggtgattgagcggcacactcacacgcctgaacggagacgaaggtactggggtcga
tcggggacagagagtgaccacggctacagcaccatgagcccgcaggaggacagcgagaat
ccacctgggaacaacgacccgctctcggctggtgtcgacgtcggtaaccacgacgatgac
ctcgacctggacacgcctccgcagactgcagcgctgctcagccacaagtttcacccttat
cggcacacgcatacacaccaccacccgctgcacacgcaccacctgcaggccgcggtcacc
gtgcacagtgtggatgcagagtgctga
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