Etheostoma cragini (Arkansas darter): 117950877
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Entry
117950877 CDS
T07493
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117950877 (lingo3a)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117950877 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
Ig_2
LRR_9
LRRNT
LRR_6
V-set
Cupin_1
LRR_RPS2
Ig_C17orf99
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
117950877
NCBI-ProteinID:
XP_034738163
LinkDB
All DBs
Position
9:complement(18351721..18388483)
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AA seq
610 aa
AA seq
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MEVSLGQNVGWLLPFLFLLLMVTVLPTQGQGCPQRCECISKLKTVSCYGRRLSALPDGIP
LDTKTLDLSGNKLRWVEHGDLLPYSRLEKLDLSENMISVLEPNAFSSLQNLQSLSLRGNQ
LKLVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGL
VGLRELTIERCNLTSVSSQSLSYLHNLVALRLRYLSISTLEDQNFRKLGNLRGLEIDHWP
FLEHISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALRDL
VRLKELHLVNTNLVAVQPYALGGLRQISLLNLSTNGLVSLEEGAFQSVNTLETLRLDGNP
LACDCRLLWILQRRKTLNFENASPVCMTPVEVHGRALNAFSDSALFDHFTCQKPKIRNRK
LQQVTAREGQVVSFICKAEGEPTPVIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVT
DSGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTL
DLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgagcctaggtcagaatgttggctggctcctgcctttcctgttcttgctactg
atggtcacagtgttacccacacagggtcaaggatgtccacagcgttgtgagtgcatttca
aaactcaagactgtttcctgttatggtagacgcctgtctgcactgccagatggcatccca
cttgacaccaagaccctggacctaagtgggaataaacttcgctgggtagagcatggggac
cttcttccatattcacgtcttgaaaagctggacctgagtgagaacatgatcagtgtcctg
gaaccaaatgctttttctagtctccagaacctgcagtcgctttcactgagggggaaccaa
ttgaaactggtccccatgggggctttctcacgtctctccaatctaacttcattggacctc
agtgggaataagattgtaattcttttggactttactttccaagacctaaaaagtctaaaa
aacctagaagttggagacaatgatttagtttatatttccaacaaggcctttctgggtctg
gttgggctgagggagctgaccattgagaggtgcaacttgacttctgtgtccagccagtct
ttgtcttacctgcacaacctggtggctctacgtctccgctacctcagtatctccacctta
gaagaccagaacttccgtaaactgggaaacctgaggggcctcgagattgatcactggccc
tttttggagcacatttcccctcacagcttgcagggtcttaacttgtcttggctgtcgatt
actcacactaacatcacctctgtgcccacctctgccctacgcagtctagctcacctcacc
agcctcaacctctcctataaccctatctctgtattggagtcctgggcgctgcgggacctt
gtaaggctgaaggagctgcatctggtcaatacaaatttggtggcagtgcagccatatgcg
ctgggtggcctaaggcaaatcagcctccttaacctctccactaacggcctggtgtccctg
gaagagggagcgtttcaatctgtcaacactctggagactctgcgtttggacgggaaccct
ctggcctgcgattgccgcttgctgtggatccttcagcgcaggaagaccctcaatttcgaa
aatgcctccccagtgtgtatgacgcccgtcgaggtgcatggacgggctctgaacgctttc
tctgactcagctctctttgatcactttacttgccagaagcccaaaatccgcaacaggaag
ctgcagcaggtaactgcccgggaggggcaggttgtgtcattcatttgcaaagcagaaggt
gagccgacgccggtgatattctggatctctcctcagcgccgccgcatcacaacaaagagt
agtggccgcctaactgtgttaccagagggtacattagaaatacggtacgcccaggtaaca
gacagtggtacctacatctgcatagccagcaatgctggtggaaatgacacctattttgcc
acacttacagtcagtgggctgccactagatgcagccctaatggcaaaccgcacgtactat
gctggggaccttaatgacacaaatctaaacgacaccagagtcttcctaaagtttactctg
gacctcaagaccatccttatatccacagctatgggctgtatcatgttcctgggagtggtt
ctcttctgtttcattctgctctttgtgtggagtcgagggagaggacagcacaagaacaat
ttctctgtggaatattccttcagaaaggtggatggacccgctgccagtggaggacagggt
ggggcccgcaagttcaacatgaaaatgatttaa
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