Etheostoma cragini (Arkansas darter): 117950977
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Entry
117950977 CDS
T07493
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117950977 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117950977 (rexo1)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
Pre-60S particles
RNases
117950977 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
117950977
NCBI-ProteinID:
XP_034738328
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Position
9:8081371..8093370
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AA seq
1276 aa
AA seq
DB search
MMIRSTGFFRGIDCPFYTEYSEGKGSRNGCNRPYCHFRHSQQRRASYGAPADVTKQRDLH
SAQKEQGYDPFNPEVVRPQEEQNGKPAASGDLTGALELVNKAIEEVRSEVEREKRKLSRI
GDEPYDPGKSTKLSTSDAVKSKTPPSHMAYDPGSYQMTTGGYNPTPGCSKYTLDSDNKGN
NSNSMEYVPTSVRKPPSRTHTPQLPSPPPSPKYSNSTSSKCKYTVDNSKPSTDMEYDPLS
NYSAGIAAKSKRDRDAQTVKTEQRTIHKQPGSAISEYVVALKKTRQQSVDSKKYTFSDSD
GESSGTEYRPTSLSNLQQKKGKNASLWDAVGKERKEKTDSMQNTLTQRNTEDLAGDSDIK
EDNKQKDILEKKKVASQTSHKKIAKSEKVHKLEKEANIMFSSKSRPSCSSSSKNKGSIKN
SNQDSAKKENKSHGTRDDRKFAVKVKTHDKVQSEARDEKRSDGKIKAVEKAKTDSSKRDK
DRENGAREIKKSKISEKEKEHSKYKDRQQKNGKLDNSKRERDIKNICKSSSSGGSNSSKF
KGSSANSKDRVKQNVSSSNGKRHKDKRRSLSHADLFGDESPEEVEPIVMDDDGDDDYEHE
EVLVRKSADALKRGRLNKRKASELTPSSSDDEGDRGVVGSGAGNGEVDDVGIDFSSFQDD
LDFDSDPMEECLRIFNESKDVKMEDKGRQAKQSSRDSEEERSTEGALTSLFPGQKKRVSH
FVAKGSSDAPSTTVVRPYKRLSAQEVCYKRMQMAQQQAAQLSASVKASSQSSGPVLSGER
KRIAHRPSPQTTSSKTSPAEVKSAARRVLSPSQTHQTVKAQTTAGILPKTTSTVMQRRVA
HTPTLKSSSMKRPIIPIEFGAKVPNNIRQRYLNAFIDECVKFCSSEDVAFNMALDEEKLV
YERSSSKNIYLNVAVNTLKKLRSKCSSCPSPVTKDPGLVANRRAQSHEEVLGGRLAATTS
FTVNRMGKQQEEKLIGATLYRKLQAYLMTEEQLQEHGYPRASPEAAGKAVIYNLPEKKAI
SDPFNKICCRCGAEYKINVSGNCIRKEECTFHWGRLRRHKVAGGWETNYSCCAAAVGTPG
CQVCKQHVQDGRKESFDGYVTTFSKALSPDGNGGVFALDCEMCYTKQGLELTRVTVIDSE
LKVIYDTFVKPESKVVDYNTRFSGVTEEDLESTTITLRDVQAVLLSMFSAESILIGHSLE
SDLLALKLIHSSVVDTAIVFPHRLGLPYKRALRNLMSDHLKRIIQDNVEGHDSSEDASAC
MELMFWKIKEDAKVKR
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgatgataaggtctaccggcttcttccgagggattgactgcccgttttacacggaatac
agcgagggcaaaggcagcaggaatgggtgtaacagaccgtactgtcacttcaggcacagc
caacagagacgggcgtcgtacggagcaccagctgatgttacaaagcaaagagacctgcac
tccgcacagaaagaacaaggatatgatcccttcaacccagaagttgtgaggccccaggag
gagcagaatggaaagccggctgcttcgggggaccttactggtgctctggagctggtcaac
aaagccattgaggaggtccgcagtgaggtggagcgggagaagaggaagctctctcggatt
ggggatgaaccgtacgatcccggcaaaagtacaaagttgtctacatctgatgctgttaaa
agtaaaacgccaccttcacacatggcctatgaccctgggagttatcagatgaccactggc
ggttataatcccacccctggctgcagcaaatataccttggattcagacaacaaggggaac
aatagtaactcaatggaatatgttcctacttcagtgagaaagcctccatctcggacacac
acacctcaactcccctctcctccccccagtccaaagtactcaaactccacatcctctaag
tgtaaatacactgttgacaattcaaaaccatctacagatatggagtatgacccgctgtcc
aactactcagcaggaatcgcagcgaaaagcaagagggaccgggatgcacaaactgttaag
acggagcagcgaaccatacacaaacaaccaggatcagctatatcagagtatgttgtagct
ctgaaaaaaacacgacagcagagtgtagactcaaaaaagtacactttttctgactctgat
ggggagagctctggaacggagtatcgacccacctcgctaagcaatctccagcagaaaaaa
ggcaaaaatgcttctctttgggacgctgtggggaaggagagaaaagaaaaaactgatagt
atgcaaaatacactgacacagaggaatacagaggacttggcaggggactcagacatcaag
gaagataataaacaaaaggacattttagagaaaaagaaggtggctagtcaaactagccac
aaaaaaattgccaaatctgagaaagtgcataaacttgaaaaggaagcaaacataatgttt
agtagtaaaagtaggcctagttgtagcagcagcagtaaaaacaaagggtcgataaagaac
tcaaaccaggattctgcaaagaaggagaacaagagtcatggaacaagagacgataggaaa
tttgcggttaaggttaagacacatgataaagttcagagtgaagccagagacgaaaagaga
agtgatggaaagatcaaagctgttgaaaaagcaaaaacagactcaagcaaaagagataaa
gatagagaaaatggtgcaagggaaatcaagaaaagcaaaatatcagagaaggaaaaggaa
cacagcaagtataaggaccggcagcagaaaaatggtaaacttgataacagtaaaagagaa
agggatataaagaacatttgcaaaagtagttctagtggcgggagcaatagcagtaaattt
aaagggagttctgccaacagtaaagatagggtgaagcaaaatgtcagctcatcaaatggg
aaaagacataaggacaaacggcgaagtctaagtcatgctgatctctttggagatgagagc
ccagaggaggtcgaaccaatagtgatggacgatgacggcgatgatgactacgaacacgaa
gaagtgttggtgagaaaatctgctgatgctttaaagaggggacgtttgaacaagaggaaa
gcgtcagagctgactccgtcttcttctgacgatgagggggatcgcggtgtggtgggcagc
ggggcaggtaacggcgaagtcgacgatgttggaatcgacttctctagtttccaggatgat
ttggactttgactccgatcccatggaggagtgtttgcggatcttcaatgaatccaaggat
gtgaagatggaggacaagggaaggcaagctaaacagtcctccagggattcagaggaggag
agaagcacagaaggcgcattaacctctctctttcccggccaaaagaagagagtctcccat
tttgttgccaaaggaagtagtgacgctccttctacgactgtggtgcgtccgtacaagaga
ctctcagcccaggaggtctgctacaagcgtatgcagatggcacagcagcaagctgctcag
ctttctgcttcagtcaaagcttcctctcagagctccggccctgtcttgtccggagagagg
aagagaatagcacaccgtcccagcccacagacaacatcctccaaaacaagtcctgcagaa
gttaagtcagctgccaggcgagtgttatcccccagccagacccatcagactgtcaaggcc
caaaccactgctggcatcttgccaaagaccacgtccactgtcatgcagaggagggtggca
cacacacccacactgaagagtagttcaatgaagcgccccatcatccccattgagtttggg
gccaaagttcccaacaacatccgccagcgctaccttaatgctttcatagatgaatgcgta
aaattttgctcatcagaggacgttgccttcaacatggcccttgacgaggagaagctggtg
tatgagcgcagcagcagtaagaacatctacctcaatgtagctgtcaacactctgaagaag
ctccgcagcaagtgcagctcctgtccatcgcctgtcaccaaggacccagggttagttgct
aacaggagggctcagtcccacgaagaagttctgggaggtcgccttgctgctacaaccagc
ttcactgtcaaccggatgggtaaacagcaggaggagaaactcattggagctacactgtac
aggaagctgcaggcatacctgatgacagaggagcagctccaggagcacggatacccgaga
gcaagcccagaggctgccggcaaagccgtcatttacaacctccccgagaaaaaggccatc
tccgatcctttcaacaagatatgctgtcgatgtggagcggagtataagatcaatgtcagt
ggcaactgtatacgaaaagaggaatgtacttttcactggggacgattgcgcagacataaa
gtcgctggaggctgggagaccaactacagctgctgtgctgcggctgttggcacaccaggc
tgccaagtttgtaagcaacatgttcaggacgggcgtaaagaatcatttgatggctatgtc
acaacattcagtaaagctctatccccagatggcaatggaggggtgtttgctttggactgt
gagatgtgttacacaaagcagggcttggaactgacacgggtgacggtcatcgactctgag
ttgaaagtcatctacgatacatttgtcaaacctgaaagcaaagtggtcgattacaacaca
cgattttcaggtgtgacggaggaggacttggagagcaccaccatcactctgagagatgtt
caggccgtgctgctcagtatgttcagcgctgaatctatcctcataggacacagtctggag
agtgacttgctcgctctgaagctaatccacagttcagttgtagacacggccattgtgttt
cctcaccgccttggcttgccctacaaacgtgccttgaggaacctgatgtccgaccacctc
aaacgcatcatccaggacaacgtggagggccacgactcgagcgaagatgcatctgcctgc
atggagctgatgttctggaagatcaaagaggatgcaaaagtcaaaaggtga
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