Etheostoma cragini (Arkansas darter): 117951005
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Entry
117951005 CDS
T07493
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117951005 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ecra03051
]
117951005 (psmd1)
Proteasome [BR:
ecra03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
117951005 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Zip
PA26
Cnd1
Vfa1
Motif
Other DBs
NCBI-GeneID:
117951005
NCBI-ProteinID:
XP_034738363
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All DBs
Position
9:complement(11859499..11900145)
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AA seq
966 aa
AA seq
DB search
MMITSAAGIISLLDEEEPQLKEFALQKLDAIVNDFWAEISGSVDKIEVLYEDETFRSRAF
AALVASKVFYHLGAFEESLNYALGAGDLFNVTDDSEYVETIIAKCIDHYTKLRVENAELP
EDEEKKIIDPRLEGIVNKMFLRCLDDHKYKQAIGIALETRRLDMFEKTILESTDVSGLLA
YSLKVCMSLMQNKKFRNEVLRVLVKLYMNLDKPDFINVCQCLIFLDDPQAVSDILEKLVK
EDNLLMAYQICFDLYESASQQFLSSVIQNLHTVGTPIPAVPGSTNTGTVPTPDKDSDAME
TDDKPGSSPAGKPVEMKDEPKDQNAKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKD
AVRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKE
ALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLGQLKNASNDIVRHGGA
LGLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQE
TQHEKILRGLAVGIAMVMYGRMEEADALIESLCRDKDPILRRSGMYTVGMAYCGSGNNKA
IRRLLHVAVSDVNDDVRRAAVESIGFILFRTPEQCPSVVSLLSESYNPHVRCGAAMALGI
CCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQSEVTCPKVNQFRQLYAKVIN
DKHDDVMAKFGAILAQGILDAGGRNVTISLQSRTGHTHMPTLVGLLVFTQFWFWFPLSHF
LSLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPALEVPKEKEKEKVSTAVLSITAK
AKKKEKEKKEKEEEKMEVEVQEAEKEKEKEKKDEEKEKEKKKEAEPNFQLLENPARAMPA
QLKVLNMPETCRYQPFKPLHTGGIIIMKDTSEEEEELVEPVSAHGPKIEEEEQEPEPPEP
FEYIDE
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgatgataacatccgccgctggaattatttcactccttgatgaggaggagccacagctc
aaggagtttgctttgcagaagctagatgccattgtgaatgacttctgggcggagatttca
ggatcagtagacaaaatcgaagtcctctatgaggatgaaacgtttcggagcagagcattt
gctgccctggtggcctctaaggttttctaccacctcggagcctttgaggagtctctgaac
tatgctctcggtgctggagatctcttcaatgtcacagatgactcggaatatgtggaaacc
atcattgccaaatgcattgaccactacaccaagctgcgggtggagaatgccgaactgcca
gaggatgaggagaagaaaatcattgacccccgccttgagggcattgtcaacaagatgttc
ctgcgatgcctagatgatcacaagtacaagcaggccattggaatcgctctggagacgagg
cgacttgacatgtttgagaaaaccatcttagaatcgactgatgtgagtggtctccttgcc
tacagcctgaaagtgtgcatgtccctgatgcagaacaagaaatttcgcaacgaggtgctg
cgggtgctggtcaagctctacatgaacttggacaagccagatttcatcaatgtctgtcag
tgcctgatattcctggatgacccacaggctgtgagtgacatcctggagaagctagtgaaa
gaggataacctgctgatggcctatcagatttgctttgacctatatgagagtgccagccag
cagttcctctcctctgttatacagaacttgcacactgttggaacacctatccctgctgtc
cctggctctacaaatacaggcactgtgcccacaccagacaaagacagtgatgcaatggag
acagatgacaagccgggtagctcccctgctggaaagccggtagaaatgaaagatgagccc
aaagaccagaatgccaagatgattaaaatccttagcggtgagatggccattgagctgcac
ttgcagttcctaatccgaaataacaacacagatctaatgatcctcaaaaacacaaaggat
gcagtccgaaattcggtgtgccacacagccacagtaatagccaactctttcatgcacaca
ggaaccacaagtgaccagttcctcagagaaaacttggaatggcttgcaagagccaccaac
tgggcaaagttcacagccacagcgagtctgggtgtcatccacaaaggtcatgaaaaggag
gctcttcagttaatggccacatacttacccaaagacacgtcccctggctcggcctaccag
gagggaggaggcttgtacgctcttggactcattcatgccaaccatggtggagacatcata
gactacctgcttggtcagctcaagaacgccagtaatgatattgtccgtcatggtggcgcc
cttggccttggcttggctgcgttgggaacagccagacaggatgtttacgacctcctcaag
tccaacttgtaccaagatgatgctgtcactggtgaagctgcgggcctggctcttggtctg
gtcatgctgggctccaagtcggctcaggccatcgaggacatggtaggctatgctcaagag
acgcagcacgagaagatcttgcgtggtctggcagtgggaattgccatggtcatgtatgga
cgcatggaggaggctgatgctctcattgaaagtctctgcagagacaaggaccccatcctg
cggcgctctggtatgtacacagtgggcatggcctactgcggctctgggaacaacaaggcc
atccgacgcctgctacatgtcgctgtgagtgacgtgaatgatgacgtgagaagggctgct
gttgaatccattggcttcatcctgttcaggacccctgagcagtgtcccagtgtggtgtct
cttttgtcagagagctacaaccctcatgtgcgttgtggagctgccatggccctgggaatc
tgctgtgctggcacaggcaacaaggaggccatcaatctgcttgagcccatgaccaatgat
ccagtaaattatgtgagacagggcgccctcatcgcctctgccctcatcatgatccagcag
tctgaagtcacctgtcccaaggtgaaccaattcaggcagctttatgcgaaggtgatcaac
gacaagcatgatgatgttatggccaagtttggagctatcctggcccaggggatcctcgat
gcaggtggacgtaatgtgaccatctctctccagtccaggacgggtcacacccacatgcca
acattggtcggcctcctggtcttcactcagttctggttctggttccccctttcccacttc
ctgtcattggccttcacaccaaccgctataattggcctcaacaaagacctcaagatgccc
aaggtgcagtatcgttctaactgtaagccctccacctttgcctacccaccagctctggag
gttcccaaggaaaaggaaaaggagaaggtatccactgctgttctctccatcacagccaaa
gcaaagaagaaggaaaaggagaagaaagaaaaggaggaggaaaagatggaagtggaggtc
caggaggcagaaaaggagaaggagaaggagaagaaggatgaagaaaaggagaaagagaag
aagaaagaggcagagccaaacttccagctcctggagaaccccgctagagcaatgccggct
cagctcaaagtcctcaacatgcccgaaacctgccgctaccagcctttcaaaccgctccac
acgggcgggatcattatcatgaaggacaccagtgaggaggaggaggagctggttgagcct
gtctcagctcacggccccaaaatagaggaggaagagcaggagccagagccacctgagccg
ttcgagtacattgacgagtag
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