Etheostoma cragini (Arkansas darter): 117951083
Help
Entry
117951083 CDS
T07493
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117951083 (sin3b)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
117951083 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
At4g15545_C
SOG2
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
117951083
NCBI-ProteinID:
XP_034738479
LinkDB
All DBs
Position
9:14615219..14634089
Genome browser
AA seq
1273 aa
AA seq
DB search
MAKIQAHSTAKQINQIQDKPYVITQKQVQQQHFQKLKVEDALSYLDQVKIRFANDPGIYN
KFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEVPKNGVAFLQSP
FSSQVSPSQQGKCVTTSAVTVTSGSASAANIEAGSAQTSEVKAAPSDSLSSSTPAGPPEA
PTRLSLPLTSRESQNQATTSSVSPPASETSPVEFDSAISYVNKIKNRFLDHPEIYRAFLE
ILHTYQKEQLEVKESRGGRGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFT
GSSLTGGKEQLKRPEEDDAITKQNKKRPRPILLQHMSPLLKKKMKYSCTKDQSFASVGKH
GVLREFSFFDKVRRLFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQF
KSFLGDKELSHAMSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTALC
KEVLNDTWVSFPSWSEDSTFASSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQ
KKLSRLSPEDQDRFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLK
RLKAKEDEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESVY
DERQEQSTEEGGVGQQNRNGSGAALSSEPHMVFMYEDKQILEDAASLIIYHVKRQPTIHK
EDKDHIKRIIQHFVPDLYFSRRGELSDTEDWTDEEVEPEEGAERALGVGAAPLLPPPPAG
AGGNVNSNNTSGATAATGSQSQPQPALSQPQQLNGESRRRRCSPSQPADTEASTTSSSTS
QPAGTASSTPASTPMETGLGAPGEKVDLRDPEAEHQKELDGVYNLFFVNNNWYFFLRLHQ
TLCTRLLRVYRQAERQLLEHRAEQSRERLLMAEGRREKACDLAMELRLKQPSEVELEEYY
PAFLDMVRSLLDGNLDSTQYEDTLREMFTIHAYIGFTIDKVIHNIIRQLQHLVSDEVCLQ
VVDLYLAERKRGAAGGNLSSQCVRAAWETSYQWKAERVMAEENCFKVMFLQNNGRVTMTI
ELLDTEEAQADDPLDVQCLSSYMEQFVGTESSLCSQAEGYFFKPVFLPRNLRRFRRWQVR
QVEAMRCRREWHRQLGVENAGSLDCRFKLNTHKMVFVMNSEDYMYRRGALVKARKSQHRV
AASQHERFDKWHQGWLANHVTASAGRSVQNWLMGEEEEDMIPCKTTCLSTEVKGQTVNRY
QVHYSGSKAPASP
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattcaggcgcacagcaccgcgaagcaaataaaccaaattcaagacaagcct
tacgttataacacaaaagcaagtgcagcagcagcacttccagaagctgaaggttgaagat
gccttgtcatatctggaccaagtcaaaattcgttttgcaaatgatcctggaatatacaac
aagtttctggacatcatgaaagagttcaagtcacagagcattgacacaccaggggtgata
aaccgcgtgtcacagctcttccatggacacccagacctagtcttgggctttaatgccttc
ctaccaccggggtatcggatagaggtcccaaagaatggggtggcttttctccagtctccg
ttctcctcacaggtatccccaagccagcaggggaagtgtgtcaccacctctgcagtgacc
gtaacctcaggtagtgcctctgctgccaacattgaagctggatctgcgcagaccagtgaa
gtcaaggcggctccatcagattccctgtcctcctcaactccagcaggacctccggaggcc
cccacccgtctttctcttcccctgactagcagagagagccagaatcaggcgaccacctcg
tctgtatcaccacctgcctcagagacaagccccgtagagtttgacagtgccatcagctat
gtaaataagattaaaaaccgctttctggatcacccagagatctacagagccttcctagag
attcttcacacatatcagaaggagcagttggaggtgaaggaaagtcgaggcggccgaggc
agtagtgggatgaccgaagatgaggtgttttctaaagttgccagtcttttcaaggggcaa
gaagacctgctggctgagtttgggcaattcttacctgatgccaagagatcattgtttaca
gggagctcattgacaggagggaaagaacagttgaaaaggccggaggaggacgacgcgata
accaaacagaacaaaaagaggcccaggcccatactactgcagcacatgtccccactgctc
aagaagaaaatgaagtattcctgtaccaaagatcagtcctttgcttcagttggcaaacat
ggagtcttaagagaattctccttctttgataaggtgcggcgcctgtttaaaagccaggag
gtgtatgagaacttcctgcgctgcattgccttgtttaatcaggaagtagtttcgggagcg
gagcttctacagctagtcactcctttcctggggaagtttcccgaactgtacacacagttt
aagtcatttctgggggacaaagagctctctcatgctatgtcagggctgtcagatcgctac
atggaggggggagggggcagggaggtggattatgcctcctgcaagcgcctgggatccagc
tacagagcactgcccaagacctaccagcagcctaaatgcagtgggcgcactgccctttgc
aaggaggtgttgaacgacacctgggtgtcatttccttcttggtcagaggactccaccttt
gccagctcgaagaagactccttatgaggagcagctgcatcgctgtgaggacgaaagattt
gagttggatgtggttctggagaccaatctggccactatcagggtgctggagagtgtccag
aagaagctctcccgtctttccccagaggaccaggaccgattcagattagacgactgcctg
ggcggcacctctgaggtcattcagcgtcgtgcggtgtatcgtatctatggtgacaaagcc
cctgagatcatcgagggactgaagaggagtcctgctaccgctgtgcctgtggtgctcaag
aggttgaaagccaaggaagacgagtggagagaggcccagcagggtttcaataagatttgg
agggagcagtacgagaaggcctacctgaagtcccttgaccaccaaggagtcaacttcaaa
cagaatgacatgaaggccctgcggtcaaagagccttctcaatgagattgagagtgtctac
gatgagcgtcaggagcagagcacagaagagggtggagttggccagcagaaccgcaatggc
tcaggtgcggccttgtcaagcgagcctcacatggtgtttatgtacgaggacaaacagatc
ctggaggacgctgcctcgctcatcatctaccatgtcaaacgtcagcccaccatccacaaa
gaggacaaggaccacatcaagcgcatcattcagcactttgtccccgacctgtacttctcc
cgccgcggcgagctcagtgatactgaagactggacagatgaggaggttgagcctgaggag
ggtgcagagcgagcgctaggagttggagcagcaccactactaccaccaccaccagcagga
gccggaggaaatgttaattctaacaatacatcaggagcaacagcagccacggggagtcag
tctcaaccccaacctgccctgtcccaacctcagcagctcaatggtgagtcgaggcggagg
cgctgcagcccatcccaacctgcagacacagaggcctccaccacctcaagtagcacgagc
cagcctgcagggactgcctcatccacccctgcgtctacgcccatggagacgggcttaggt
gcacctggggagaaagtggacctgcgcgaccctgaagcagagcaccagaaagagctggac
ggtgtctacaaccttttcttcgtcaacaacaactggtatttcttcttgcgactgcaccag
accctgtgtacgcgcctgctgcgggtctaccggcaggcagagcggcagctgctggagcac
cgagctgagcagagcagggagaggctgctgatggccgagggaaggagagaaaaagcttgt
gacctcgccatggagctccgcctcaaacagcccagtgaggtggagttagaggagtactac
cctgccttcctggatatggtgcgcagcctgctagatggcaatctggactccacacagtat
gaagacacactgagagagatgttcaccatccacgcttacatcggcttcaccatcgacaag
gtcatccacaacatcattcggcagctacagcacctagtgagcgacgaggtgtgtctgcag
gtggttgatctttacctggctgagaggaagaggggggcagcggggggtaacctgtcctcg
cagtgtgttagagcagcctgggagaccagctaccagtggaaagctgagagagtcatggct
gaagagaactgtttcaaggtgatgtttctccaaaacaatggtcgtgtgacgatgaccatt
gagctgctggacactgaggaggcccaggctgatgacccgttagatgtacagtgcctgtcg
agctacatggagcagtttgtaggaactgagtccagtctgtgttcgcaagccgagggctac
ttcttcaaacctgtattcctgcccaggaacctgcgtcgtttccgtcgctggcaggtgcgg
caggtggaggcgatgcgctgcaggagagagtggcaccgccagctgggcgtggagaacgcc
gggagtctggactgtcgatttaaactcaacactcacaagatggtgtttgtcatgaactct
gaggattacatgtaccgcagaggagcactcgtcaaggccaggaagtcgcagcacagagtg
gcagcaagccagcatgaacgctttgacaagtggcaccagggctggctggccaatcacgtt
acggcctcggctggacgctccgtgcagaactggctaatgggcgaggaggaagaggacatg
atcccctgcaagactacctgcctatcgactgaggtgaaagggcaaacggtgaacagatac
caagttcattacagcggtagcaaagccccagcctccccgtag
DBGET
integrated database retrieval system
