Etheostoma cragini (Arkansas darter): 117951188
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Entry
117951188 CDS
T07493
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
ecra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117951188 (syvn1)
04120 Ubiquitin mediated proteolysis
117951188 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117951188 (syvn1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117951188 (syvn1)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117951188 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
Prok-RING_4
FANCL_C
Motif
Other DBs
NCBI-GeneID:
117951188
NCBI-ProteinID:
XP_034738664
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All DBs
Position
10:2847055..2859237
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AA seq
629 aa
AA seq
DB search
MVRATLVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMGLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYLLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRATNNNRTPAPAPAPAPAAPANAPAA
PPPNVAPGMLPGFPPGVFPFWGPFPAGPPPAAAPGATEAPRSSTEATQAPGSSPAAASTA
DPAAGAAAPGSAMPGFPFSFPPPPFPSAPWLPMPPPPPFVSSMPPPPPSLSRLSDEELRE
LEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLAPPRTEGSTGEASGTEDAAS
PPAAGSGTDSPSRERDSSSSEQVDGATVSSQPADSTSSTASGTERKEELDEGAAGAEDED
GEPNAAELRRRRLRKLETSSPSSSPPPDN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcaaccttggtgactgccaccagtctggcgctgaccggggctgtggtggca
catgcttacctcctcaaacaccagttctacccgactgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcctttgtgttggtgtttctgctgggaaagttc
atgaggaaggtcttttttggacagctaagggctgctgaaatggagcatctgattgagcgc
tcctggtacgccgtgactgagacgtgcttggcgttcactgtgttcagggacgacttttcc
cctcgatttgtcgccctcttcacacttctgctcttccttaagtgctttcactggctggcc
gaggaccgggtggactttatggaacggagtccaaacatatcctggatttttcacttcaga
gtattatctctcatgggactgctggctgtcctggacttcctgtttgtcaaccatgcctgt
cacagcatcattacccgaggagcctcagtccagcttgtttttggatttgagtatgccatc
ctgatgaccatggtgctcacaaccttcattaagtacctcctgcacactattgacctgcag
agcgagaatccctgggacaacaaggccgtctacatgctctacacggagctcttcacaggt
ttcatcaaagtgctcctgtacatcgccttcatgaccatcatgataaaggtccacactttc
cccctgtttgctatccggcccatgtacctggccatgaggcagttcaagaaagctgtaacg
gatgctataatgtctcggagagccatccgcaacatgaatacactgtaccccgatgctact
cctgaagatctgctggcctcagacaacgtctgcatcatctgccgagaggagatggtcacc
ggagccaagaaactcccttgtaatcacattttccactccagctgcctccgctcctggttc
cagaggcagcagacctgcccaacctgtcgcatggacgtcctccgtgcaactaataacaac
cggactccggccccggccccggccccggctcccgcggccccggccaacgcccccgcggcc
ccaccccccaatgtggccccaggcatgttgcccggttttcctccgggtgtcttccccttc
tggggtcccttccccgcagggcctcctcctgctgcagctcccggcgccacggaggctccg
cgaagcagcaccgaggctacacaggcacctggttccagcccggccgctgcgtcgaccgca
gaccccgctgcaggtgctgctgctccaggctcagccatgccaggcttccccttctccttc
cccccgccgcccttcccctctgcaccgtggctgcccatgccaccacctcctccctttgtg
tcatcaatgcctcctcctcctccatctctgtcccggctgtccgatgaggagctgagggag
ctggaggcggaagggcggcggggcctcgaggccaggctccagtgtctccagaacatccac
accctgctggacgccgccatgctcaacatccaccactacctcagcaccgtcgccacgctt
gcccctcctcggactgagggcagcaccggagaagccagcgggacagaagacgccgcttca
cctcccgcagcgggcagcggcacggacagtcccagccgggagagggactcctccagctcc
gagcaggtggacggggctacggtctcctctcagccggccgactccacttcttctaccgct
tcgggcacggaaagaaaagaagagctggacgaaggcgcggcgggggcggaggacgaggac
ggagaacccaacgccgccgagctgaggcgccgacgccttcgcaagctcgagacgtcatca
ccctcgtcttcaccccctccggacaactga
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