Etheostoma cragini (Arkansas darter): 117951424
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Entry
117951424 CDS
T07493
Symbol
ppargc1b
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117951424 (ppargc1b)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
117951424 (ppargc1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nop14
CDC45
Paf1
Motif
Other DBs
NCBI-GeneID:
117951424
NCBI-ProteinID:
XP_034738990
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Position
10:26879045..26972089
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AA seq
924 aa
AA seq
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MADCAPLLDEELSSFVFSYLTENSGSQYGEEEVCSDRLDTDFPDIDLSQLDTSDFDSVNC
LSELQWCNDQPADVSPASIHYSTADELFEIEEENAALLAALTDSLDGMVDAEVGGLSVFP
ALGEEPDQEEEDEDSLSLSTEDFSQSLGAETEDPSLLKKLLLTPPNVPTPIDAHKDRVPG
HRYSNRSLQVRPVRPLVKSDHRQERKPRVVRPAGRLCTELHRHLTTARDSEENPAPDTEE
DEEDEESESEEDEEEEEGEEEEEESSSSEVEGVGVVAAVPGEPAKPQFSSEKELHSVVEL
ITYMHTYCLPTRKQQGWERKDREAPRPRARAEASRLATTNSHSRVVLVATPGTSVGFTGT
GSAPRRLPFARRREMKANSLLRELLQQSSSFDVSKPYRLHSPPYLHSPNRVGVSTPSAAA
KSASSYFPSSSTPKLELRKDSSSHERRSYSSEAPQSPEETAEDGGSFSVRRSRRLASFPS
RFAKRLRPGRAREGEGRDREEREEGRAGVKLMPTQAGGGTTTKKQPEQPNPEDDSTGTTE
PTKPCCHEKRACLCLPLNSKSTGRESQYSTKSFEQTLGVDLCGTAGLTPPTTPPHKPVED
ELFKPAEGGKGGEGTVGVDGGSEASSTITASKGSSWLSRTHHQRKLPEQTELYAQLRRMG
QAGDIDTHRTFGDHDYCALSLGESRKRSAAMLGAILQAQGGSDGVGSQAPKAADNQVSDG
NGKENRERLDVSEIAELLEHHTPTVVISSSPPLHCQSPAATPPVSEEEAERSSRSPSPIL
LCPDSPASKTDSSENSEICTDDKQRNKAKSDEDNCQVFYIHNLPTSVTQNMLRKRFQVFG
KPEDCKVIICNEERCGVIKIRQSGVQKHWRERETVFQNGPAGLRRLTRKRYIDLDEAGPG
PVKSKYDALDFDTLLKEAQKSLHR
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgctccactattagatgaggaactctcgtcctttgtcttcagttacctg
acagaaaactccggcagccagtatggggaggaggaggtgtgttcagatcgcttggacact
gacttcccggacatcgacctttcccagctggacaccagcgacttcgacagcgtcaactgt
ctcagcgagctacagtggtgcaacgatcagccggcggacgtgtcaccggcctccatccac
tacagtacagcagatgagctctttgagatagaagaggagaatgcggctctgctcgccgct
ctgacagacagtttggatggcatggtggatgcagaggtgggcgggctctccgtcttcccc
gccctgggggaggagcctgaccaggaagaggaagacgaggacagtctttctctcagcacc
gaggacttcagccagtccctgggggccgagacagaggacccttctctactaaagaagctg
ctgctgactcctcccaacgtgcccacgcccatcgacgcacacaaagatagagtcccaggg
catcgctatagcaaccgaagcctgcaagtacggccggtcagaccactggtcaagagtgac
caccgtcaggagcggaagccccgagtggtgcgtccagcgggccgcctgtgcacagaactc
caccgccacctcaccaccgcccgggactcggaggaaaacccggcccccgacacagaggag
gacgaagaggacgaggagagtgagtcggaggaggatgaagaggaggaggaaggggaggag
gaagaggaggagtcttccagcagcgaggtggaaggtgtgggagttgtggcagccgtcccc
ggtgagccagcaaagccacagtttagctcagagaaagaactgcactctgtggtagagctg
atcacgtacatgcacacgtactgcctgcccacacgcaagcagcagggctgggagcgtaag
gaccgggaagccccgaggcctcgggccagagctgaggcctcccgcctagctaccacaaac
tctcacagcagagttgttttggtggctactcctgggactagtgtgggttttactgggaca
ggcagtgcccccagaaggctcccatttgcaaggcgaagggagatgaaagccaactccctt
ctgcgtgagcttctgcaacagagcagctctttcgatgtgagcaagccttacagactgcac
agccccccttacctccacagccctaacagagtaggagtatctactccttctgctgcggcg
aaatcagcctcatcctacttccccagctccagcacccctaagctagagcttcgtaaagac
tcctcttctcatgagaggagaagctactcctcggaggcgcctcaaagcccagaggagacc
gcagaagacggcggctccttctctgttcggcgctcccgacggctggcctccttccccagc
cgcttcgccaagaggctgcggcctggacgagcgagggaaggagagggtagggacagggag
gagagggaggagggacgagcaggggtcaaactcatgccaacccaagcaggagggggtacg
acgacgaagaagcagccagagcagcctaacccagaagacgacagcactggtacaacggag
ccgaccaaaccctgctgccacgaaaagcgagcctgcctctgtctgcctctcaactccaag
tccactggcagagagtcccagtacagcaccaagtcttttgagcagacgctcggtgtggat
ctgtgtggaacggcaggtctcacccctcccaccaccccgcctcacaaaccagtggaggat
gagctctttaagccagccgagggaggaaagggaggtgaaggaacagttggtgttgatggt
ggcagtgaggcctcaagcaccatcaccgcttcgaagggctcgtcctggctgagccgcacc
caccaccagcggaagcttccagagcaaacggagctgtatgcccaactgcggcgcatgggc
caggccggcgacatcgacacccaccgcacctttggggaccacgactactgtgctctgagc
ctcggggagagccgcaagcgcagcgccgccatgctcggcgccatcttgcaggcgcaagga
gggagcgatggagttggatcccaagcacccaaagctgcggacaatcaggtatcggatgga
aatggaaaggagaacagggaaaggctggatgtgtcagaaatcgcagaactgcttgagcac
cacacgccgacggtggtgatatcatcatcaccgccgctacactgccaatcgccagctgcc
acgccgccggtctcagaggaagaggcggagcgctcgtctcgctccccctcccccattctc
ctgtgtcctgactcccccgccagcaagacagactccagtgagaactcagagatctgtacc
gacgacaagcagaggaacaaagccaagtctgacgaggacaactgccaggtgttttacatc
cacaacctcccaaccagtgtgacccagaacatgctgaggaaacgcttccaggtttttggc
aaacctgaggactgcaaagtcatcatctgcaacgaagaacgctgtggggtgataaagatc
cgccagtcgggggttcaaaagcactggagagagcgggagactgttttccagaatggacca
gcaggcctacggaggctgacaaggaaacgctacatagatcttgatgaggcaggtccgggc
cctgtcaagagcaagtacgatgcactggactttgacactctgctgaaggaggcccaaaag
tccctgcaccgctga
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