Etheostoma cragini (Arkansas darter): 117951511
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Entry
117951511 CDS
T07493
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117951511 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117951511 (fip1l1b)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117951511 (fip1l1b)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117951511
NCBI-ProteinID:
XP_034739148
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Position
2:17283964..17297244
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AA seq
560 aa
AA seq
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MSAEEADKTTTTDASAGDEEEEWLYGDESESKDEDEEAKLNAAVSAPADASTEDDAAAVH
ATGNGVASEATGEGAGEGAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNL
NIKTTGSRPYGQASKIKGVDLDAPGNINGVPVLEADMESFEEKPWRKPGADLSDYFNYGF
NEDSWKAYCEKQKRLRMGLEVSTVGSVTSKITVQQGRTGNEKDISTLPVHTSKPDFTSPI
SLYKPSVSQVPRISPPQWPGPPLQDMSYYTKTSGTIDVIGGGTATISRVEGRRRHNLEGN
NIQVIAEQSDAEPTQAKIPTFFPPGPLPPNIPPPPFLPPPPNVNTAPPLIPPPRLPITVP
PPGFPPPPSGPPPSIMPTMDSGHPGGYDGRSVPPYPFPQGAYPPLMAGGVPPPWPPMMDN
SKPWDYYSRRDDKREKERERPRERERTHEREREREHSPSAMGYTSEEERYRYREYQERGY
AERHRERSSREKEERHRERRHREKEEGRHKSSRSSSRRRHDSEEGDSHRRHKHKKSKRSK
EGKETNEEISADQENQEAME
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggacaaaacaaccaccactgatgccagcgctggagatgaggag
gaggaatggctatatggagatgagtctgagagcaaagatgaggacgaagaagccaaactg
aatgctgcagtcagtgcacctgctgatgcttcaacagaggatgatgctgctgctgtacat
gctacaggaaatggagtggcctccgaggcgacaggtgaaggtgcaggtgaaggtgcaggc
gaggacgttgacagtgacagcgacagtgatgatgatgacgatgatgtccgcgtcaccatt
ggagacattaaaactggagctccacagtacacaacttatggcgctccacctgtcaatctc
aacataaagacaacaggctccagaccttatggacaagcctccaagataaagggagtggat
ctggatgctcctggaaacattaacggggttccagtgctggaggcggacatggagtccttt
gaggagaaaccctggaggaagccaggagcggacctgtcagactactttaactacggcttc
aatgaagactcatggaaggcttactgtgaaaaacaaaagagactgcggatgggcctggag
gtctctactgtcggctcggtgaccagcaagatcactgttcagcaaggcaggacaggtaat
gaaaaggacatatcgactttgcctgttcacacctccaagccagacttcacatctcctatc
agcttgtacaagccttctgtcagtcaggtccccaggatctctccccctcaatggcctggc
ccgcctcttcaggacatgtcctattatacgaagacaagtggtactatagacgtgataggt
ggagggacggccaccatcagcagggttgaagggcgacgcagacacaatctagaaggcaac
aatatccaggtaatcgctgaacaatcagacgccgagccaactcaagcaaagattcccacc
ttcttccctcctggaccgcttcctccaaacatacccccacctcctttcctccctccgcca
cccaatgtcaacacggcacccccactcatccccccacccaggttgcccattactgtccct
ccccctggttttcctcctccacctagcgggccccctccttctatcatgcccactatggac
agtggccaccctggaggttatgatggacgctctgtacctccctaccctttccctcaaggt
gcataccctccactcatggctggaggggtgcctccgccttggccccccatgatggacaac
tctaaaccctgggactactattcccgtcgagacgacaaaagagaaaaggaaagagagagg
cccagagagagagagaggacacatgagcgagaaagagagagggagcacagcccttcagct
atgggctacaccagtgaagaggagcggtatcgttaccgcgagtaccaggagcgtggttat
gccgagcgacaccgtgagcgttcgagccgagagaaagaggaaagacacagagagagacgg
caccgagagaaagaggagggtcgccacaagtcctctcgcagcagtagcaggagaaggcac
gacagcgaggagggcgacagccaccggaggcacaaacacaagaagagcaaaaggagcaag
gagggcaaagagaccaacgaagagatcagcgcagaccaggagaaccaggaggccatggag
tag
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