Etheostoma cragini (Arkansas darter): 117951694
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Entry
117951694 CDS
T07493
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117951694 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117951694 (rbm22)
Spliceosome [BR:
ecra03041
]
Complex B
Other components
Prp19-related factors
117951694 (rbm22)
Complex C
117951694 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
117951694
NCBI-ProteinID:
XP_034739412
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All DBs
Position
10:complement(14640542..14646957)
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AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSISTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQAAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGISEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPGTSPAV
MNIALPPPPGINPPPPGFGPPMFHPMGHMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRHGD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatccctaggatccaacacctacaatagacagaactgggaagacgcggatttt
ccaattctgtgtcagacatgtttaggagaaaacccttacattcgtatgaccaaggagaag
tatgggaaagaatgcaagatttgtgctcgaccatttactgtgttccggtggtgtccaggg
acacggatgcgtttcaagaagacggaggtctgtcagacctgcagtaaaatgaagaatgtt
tgtcaaacatgtctgctcgacctggagtatggtttgcctatccaggtcagagacactggg
ctgtcagttaaagacgaggttcctaagtcagatgtgaacaaagagtactacacacaaaac
atggagagagagatagccaattctgatggcacacggccggtggggcagctaggtaaagct
cccagctccagtgatatgttgctaaaacttgctcggaccactccatactacaagaggaac
cggccacacatctgctccttctgggtgaagggagagtgtaagagaggggaggagtgtccc
tacaggcatgagaagcccacagatcctgatgaccctctggctgaccagaacataaaggac
cgttactatggcatcaatgacccagtagctgacaagctgctaaaacgcgcctcaactatg
ccccgactggacccaccagacgacaagtccatctccaccctctacatagggggtttggga
gatactgtcactgatggagatctcaagagtcacttttaccagtttggtgagattcgcaca
attaccatagtccaaaggcagcagtgcgccttcatccagtttgccactcggcaggcagct
gaaatggctgctgagaagtccttcaacaaactcatcattaatggacggaggctcactgtc
aagtggggaaggtcacaggcagcaagaggaaaggagggcatcaaagatggcatcagtgag
atgggcaccagacttgaccctgtccctggactgcctggagctcttcctccaccaccagct
ttagatgaagaagcacctgcaaactacttcaacctggaccccggcacctctcctgcagtc
atgaacattgctctgcccccccctccaggcatcaacccgccgcccccaggtttcggccct
ccgatgtttcaccccatgggtcacatggctccccctatgccccctccgatgagcatgaga
cctcctggtcaaatccactacccctcccaggatcctcagcgcatgggtgcccacgccgca
catggctcacgtcatggtgattag
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