Etheostoma cragini (Arkansas darter): 117951705
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Entry
117951705 CDS
T07493
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117951705
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117951705
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117951705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
117951705
NCBI-ProteinID:
XP_034739436
LinkDB
All DBs
Position
10:16624515..16638051
Genome browser
AA seq
639 aa
AA seq
DB search
MDPPRTRSRSRSGFYHFGNGGSNGSGNAVGNGSMMNASGGGVSYPQQSNPGWAPHHGGRS
YPESQQQHTQGSYLSAGAQRHSSHGAHRHLGAGGVLHFHPDNVCNDDRDKMEDSPSPKRQ
RLSQQTMLDLNSAPPSTPSSPIRPWELPPSRRPHPHYMPERCHTPVRNRRSPPMRRQRGR
RDRLTRHHNHHAHNNHHHYNSNNNNHHHHPNAHHHHHHHHLHSHHGLSPGHQDENYRHQA
PTQGYPPYNQQPSRGLGPGLEERPGHHPQNPSPRPLHQSPNLSPRLLHPAAHPQHQHQHP
HPHPHPSQQSSVVLDLHEQGSAPVSYAVSPPGVPPGLPPRSTPQQIPACSVVFSGQHYPV
CSVPPPVLQTCSVQHLPMPYPFPSLLSSDQAFLLPPPHLPHPPAHLSHHPPHLPQPGQFG
PYPTQQARSPLQRIENDVELLGEHLSLGAGLHYPPATHPALTPHSTQLHFLSHDPLPQEF
FGVSYPNFIPRRLPGRRYRSQQPLPPSPYHPSLLPYFLSMLPVQPTGPAISLELDVDDGE
VENYEALLNLAERLGEAKLRGLTKGDIEQLPSYRFNPNNHQSEQTLCVVCMSDFESRQLL
RVLPCSHEFHGKCVDKWLRANRTCPICRADASEVQRDSE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggatcccccgaggactcggtcacggtctcggtctggtttctatcatttcggcaacggt
gggagtaatggcagtggtaacgcagtgggtaacgggagcatgatgaacgccagcggaggt
ggagtgagctacccgcagcagagcaaccctggctgggcgccacaccacggtggccgtagc
tacccggagagccagcagcagcacacccaggggagctacctgtccgcaggggcacagcgc
cactcctcacacggagcccacagacacctcggggccggaggagtgctacatttccatcca
gataatgtgtgcaatgatgatcgagacaaaatggaagacagcccaagccctaaaaggcag
cgtctttcccaacagaccatgttggatcttaactccgcccctccctctactccttcctct
cccatccgtccctgggagctgcctcccagtcgcagaccacacccccactacatgccagag
agatgccacacgcctgttcgcaacagacgcagccctccaatgagacgccaacgtggccga
agagaccgtctgacccgccaccacaaccaccatgcccacaacaaccaccaccactacaac
agcaacaataacaaccaccatcaccaccccaacgcgcaccatcatcatcaccaccaccac
ctgcactcccaccacggcctttctccaggccaccaggatgagaactatcgtcaccaggct
cccactcagggctacccaccctataaccagcaaccgtcccgagggttggggcccgggctt
gaagagcgcccaggccaccatccccaaaatccctcccccaggcctctccaccagtcacca
aacctgtctcccaggctgctgcaccctgcggcccatccacagcaccaacaccaacaccct
cacccacacccccacccatcacagcagagcagtgtggtgctggacctccatgagcagggt
tcagctccagtatcgtatgctgtgtctcctccgggagtgccaccaggcctgccgccgcgc
tccactcctcagcagattccggcgtgctccgtagtctttagtggacagcactaccctgtc
tgcagtgtacctcctcctgtccttcagacttgttctgtgcaacacttacccatgccctac
ccattcccatccctgctgtccagtgaccaggctttcctgcttccccctcctcacctcccc
catcccccagcacacctttcccaccacccacctcacctgcctcagcctggacagttcgga
ccctatccgacgcagcaggcccgctcgccgttacagaggatagagaatgacgtggagctg
cttggagaacacctgtctttgggtgctggtcttcactacccccccgccacccaccctgcc
ctcacaccacattccacacaacttcacttcctctcccatgaccccctgccacaggagttt
ttcggagtgtcctatccaaactttattccgcggcgtctcccggggcgacggtaccgctcg
caacagccactgccaccttcgccttaccaccccagcctcctgccttacttcctttcaatg
ctgccagtccagcccacaggtcctgcaatcagtctagagctggatgtagatgatggagaa
gtggaaaattatgaggccctcctgaacctcgctgaacgtctgggggaggccaaacttcgt
ggactgacgaagggagacatcgaacagcttccttcctaccggttcaatccaaataaccac
cagtctgaacaaacactgtgtgtggtgtgtatgagtgattttgagtcccgccaactgctg
cgagtcctgccctgcagccatgagttccacgggaagtgtgttgacaagtggctgagggcc
aacaggacatgtcccatttgtcgggccgacgcctcagaggtccagagagactcagagtga
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