Etheostoma cragini (Arkansas darter): 117951710
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Entry
117951710 CDS
T07493
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117951710 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117951710 (atrx)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117951710 (atrx)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117951710 (atrx)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117951710 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117951710
NCBI-ProteinID:
XP_034739443
LinkDB
All DBs
Position
10:complement(13392846..13431417)
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AA seq
2082 aa
AA seq
DB search
MSLASSESHLDQMSEKAEEPGSSTETMKPSSSRNKRKPTTVAKHTELNESDDSVESENEG
ATSDNPSDSNTCSLSKGTLVMRPSANENKGAMKLRVDFKQKHTDDTLQKKVSCTACGKQV
NQFQRNSVYEHPALKVLICKSCYKYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNA
FCKKCILRNLGRKELSVITDENSKWHCYVCRSEPLQDLVSKCHRIMEKQELKQPKPEKNE
ERESRRHKNKTVREHKAVVNGKEHTESSGTMTFSYKKLQVPKELIKKAKKLVETTTGLNN
TFIQFIQQAAEKQEDKSIRYRHLKAFKAVLADLKKAHSALEEALGPEFKNMELQNGNEGQ
HIVRKSIHIVAPEENDHMDNVADADAEVDIGAEQDANITEEADVEEEADVEEEAGIEEEE
EEEAGIEEEEVAGVEEEEEEEAGVEEEEEEADAEEEADAADEFDKEQLNEQEVNNDQVSV
ATEMKDIQTKTDSTKKTIKTEECDDGLASAGEMSLDQDIMSVPPSVPEELFQMVESLAGS
TMLSQTDTDLVTGADTKSNGNSTASQPTRPKVKNLIVKLTPVPVVTTRGSRSSRSKNKEK
DGEMQKNSEEKCEKGKDDASDAVEGTDSPPPSRRSSRLKTTPLRKQAEKKGKEESSESEE
DKVKAKSSKKSSYANKEEAEKAKDLEKKTVDSDSDEVPNILLEKAAAGHSTDEEQGTTSA
KKCLFKLNNTSTKETDKVSKRKRKSESSDSDLDNRSKKTSKKNKKKKKQNGSDSTNSDSD
QEKETKSKAATAKRRSSRVKKQDESKEEDRNSPERKATRGRRSYENKRKGRSPKAASKLQ
SSSSEDEEEQPAEGDSGEDSDEQKIKPIVDDNVVGGSGPFHQSSGDEEGDKEKVSQVFED
DDDDDPENRIAKKMLLAQIKSNYSSGAESSSENEGADKDAKSSKKVKKEEDEEEEEDNEQ
QDNDSEDSSSDVEVKKRGRRHKLLRHKLSLSEGESGEEQAASKEKKNKKKVDSDDSSDSD
SEFEKSESSEESGISEELSESENEGKRRKTRSAKKKDQEKPRSYKQKKKRRRIKVQDSSS
SNEKSGEDEDDPDGEERKQRKKIRKILKDDKLRTETRDALKEEEERRKRIAEREALRQKL
RETIVVEESSQMNCPITTKLVLDEDEETKEPLVQVHRNLVTKLKPHQVDGVQFMWDCCCE
SVKKMEKSSGSGCILAHCMGLGKTLQVVTLLHTLLLCEKLNFSTALVVCPLNTVLNWLNE
FEKWQAGMKDDESLEVSELATVKRPQDRAYALQRWQDTGGVIIIGYEMYRNLTQGRNIKS
KKLKETFQKTLVDPGPDLVICDEGHILKNEASAVSKAMNSIRTRRRVVLTGTPLQNNLVE
YHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLQDVRIMKKRAHILYEMLAGCVQR
KDYTALTKFLPPKHEYVLSIRVTPIQCKLYRYYLEHFTGVGNALEGSRGRAGTKLFQDFQ
MLSRIWTHPWCLQLDYISKENRGFFDEDSMDEFIASETEESSMSMTSDDERTKKKKKQGK
GKKKQSDDSDSDDVEVIKEWNTSSRGRNGEGRVRPEPVEEVRPTSSAPGSPNPDWHRDFV
TDADAEILEHSGKMMLLFEILRMAEEVDEKVLVFSQSLISLDLIEDFLELACRAKDEDKV
SPYKGEGKWFRNIDYYRLDGSTNATTRKKWAEEFNDISNPRGRLFLISTRAGSLGINLVA
ANRVIIFDASWNPSYDVQSIFRVYRFGQLRTVYVYRFLAQGTMEEKIYDRQVTKQSLSFR
VVDQQQIERHFTTNELAELYTFDPDMLDGPSEKKSKKATPLLPKDPFLAEMLQNNKDQIV
CYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGVSMRTNFQSGYPQMDMGSSNYFSFN
MAALASMTNQQLEELINQGRHKVIEATNALKTLTRESLEDTIARLWKENPALTENQVQAM
ALGRQASVELEVKRREIAYRDVLTRQQTLMMYVQKLITNRKVQEQQMAMANQASYLNQLA
MQNGMMGGAGLSQMDLLGLYQQLHGLNSHQGMGKNPGPSKGL
NT seq
6249 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcttcttctgaatcacacctagaccaaatgtcagaaaaagcagaggagcct
ggtagctcaacagaaactatgaagccttcctcttctcgcaacaaaaggaagcccaccact
gtagctaagcacactgaactgaatgaatcggatgactcagtcgagagtgaaaatgaaggt
gcgacatctgacaacccttcagacagtaacacatgcagtttatctaaaggcactttagtg
atgaggccatctgcgaatgaaaataaaggcgccatgaagctcagagtggattttaaacag
aaacatacagatgatactctgcagaagaaagtaagctgcactgcctgtggaaaacaagta
aaccagtttcagcggaactctgtgtacgaacatccggccctcaaagtacttatttgcaag
tcatgctacaagtattacacaagtgatgacatcaacagagactctgatgggatggatgag
cagtgcaggtggtgtgctgaagggggcaagctcatctgctgcgactactgcaacaacgcc
ttttgcaagaagtgcatcctgcgcaacctgggcagaaaggagctatcagtcattactgat
gaaaactcaaagtggcactgctatgtctgcaggtcagagcccctccaggatctggtctcc
aaatgccaccgcatcatggaaaaacaagaactcaagcaaccaaaaccagaaaaaaatgag
gaacgtgaaagcaggagacacaagaacaaaacggtcagagagcacaaagcagttgttaat
gggaaagaacataccgaaagctcagggaccatgacattctcttacaaaaaactgcaggta
cccaaggaacttataaagaaagcaaaaaagcttgttgaaacaacaactggtctgaacaat
acattcatccagttcatccagcaggcagccgagaagcaggaagataaatctatcaggtac
cggcatttaaaagccttcaaggctgtgcttgctgatttgaaaaaagcccacagtgctttg
gaggaggctttgggacctgaatttaaaaacatggagttgcagaatggtaacgaagggcaa
catattgtgagaaagagcatacacattgtagcccctgaagaaaacgaccacatggataat
gtggcggatgccgacgcagaagtggatattggcgcagaacaggatgctaatatcacagag
gaggctgatgtagaggaggaggctgacgtagaggaagaggctggcatagaggaggaggag
gaggaagaggctggcatagaggaggaggaagtggctggcgtagaggaggaagaggaggaa
gaggctggcgtggaggaggaagaggaggaggctgacgcggaggaagaggctgacgcagca
gacgagttcgacaaggagcagcttaatgagcaggaggtgaacaatgatcaagtgtcagtt
gcgactgaaatgaaagacatccaaacaaaaactgattcaaccaaaaagacaatcaaaacg
gaagaatgtgatgatgggcttgcgtcagctggtgaaatgtccctagatcaagacattatg
tctgtgccgccttcggttccggaagaactttttcagatggtggagagtcttgcgggttcc
accatgctttcacagactgacaccgatttggttacaggtgctgatacaaagtcaaatgga
aactcaacagcctctcaacccacccggcccaaggtgaagaacctcattgtcaaactgact
cctgtaccagttgtgacaacgcgtgggtccagatcctccagatccaaaaacaaagaaaaa
gatggggagatgcaaaaaaatagtgaagaaaaatgtgagaaggggaaagacgatgcttct
gatgcagtagaagggacagacagcccaccaccaagccgtcgttctagtagactgaagacc
actcccttgagaaagcaggctgagaaaaagggcaaggaagaatcctcagagtctgaggaa
gataaggtcaaggccaaatcttccaagaagtccagttatgccaataaagaggaagcggag
aaggccaaggatttagagaaaaagactgtagattctgactcagacgaagttccaaacata
ctgctggagaaagctgcagcaggccacagcacagatgaggaacaggggaccacaagtgct
aaaaagtgtttattcaaactaaacaacacatccacaaaagagacagacaaagtgtccaaa
cgcaaaaggaaatctgaaagctctgattcagacttggacaacagaagtaaaaagacgtcc
aagaagaataagaagaagaagaaacagaatggctcagactccactaactctgactctgac
caggagaaggagacaaagagtaaagcggccacagcaaagaggagatctagccgtgtgaag
aaacaagatgaatcaaaagaggaagacagaaactcacctgaaagaaaagcaaccagggga
agaaggtcttatgaaaataagcgcaagggaaggagccccaaagctgcctccaagctgcag
tcatcctccagtgaggatgaggaggagcagccggctgaaggtgactctggagaggacagc
gacgaacaaaagatcaaacccattgtggatgataatgtggtcggtggaagtggacctttc
catcaatcctcaggtgatgaagaaggcgataaagaaaaagtctctcaggtttttgaagat
gatgacgatgatgatcctgaaaacaggattgcaaagaaaatgcttcttgcccaaataaaa
tccaactactcttctggagcagagagctcctctgaaaatgaaggagcagataaggacgca
aagtcctccaagaaagttaaaaaagaggaggatgaagaagaggaagaagacaacgaacaa
caagacaatgattcagaagactctagctctgatgttgaagtgaagaaacgtggcagacgc
cacaaattgcttcgtcataaactctcgctgagtgagggtgaatcaggagaggagcaagct
gccagtaaagagaagaagaacaagaagaaagtggacagcgacgactcttcagactcagac
tcagaatttgagaagtccgagtccagtgaagagtcggggataagcgaggagcttagtgaa
tcagagaacgagggaaagcgccgaaagacgagatctgcaaagaagaaggaccaggagaaa
ccgagaagttacaagcagaagaagaagcggcgcaggatcaaagtgcaggattcctcttcc
agcaatgagaagagtggagaagatgaagatgacccagatggagaagaacgcaaacaacgc
aaaaagatccgcaaaattctgaaggacgacaagctgcggacagagacgagagatgctcta
aaagaagaagaggagaggaggaaacgtatagctgagagagaggcactcaggcagaaactt
cgtgagacgattgtagtggaggagtcttcccagatgaactgtcccatcaccaccaagctg
gtgctagatgaggatgaagagaccaaggagccgctggtgcaggtgcacaggaaccttgtc
acaaagctcaaacctcaccaggttgacggggtgcagttcatgtgggactgttgctgtgaa
tctgtgaagaagatggagaagtcttctggctccggctgcatcctcgcccactgtatgggt
ctggggaaaactttgcaggtggtgacattacttcacactttgctactttgtgagaagctc
aatttctccacagcactggtggtttgtccactgaacacagtccttaattggctcaacgag
tttgagaagtggcaagcaggaatgaaggatgatgagagtttagaggtatctgagctggct
acagttaagaggccacaggatagggcatacgccctccagcgatggcaggatacaggtgga
gtaatcatcatcggttatgaaatgtaccgcaacctgacgcagggcaggaacatcaagagc
aagaagctcaaagaaacctttcagaagacactggtagatccaggtccagacttggtgatc
tgtgatgaaggacacatcctaaagaatgaggcatctgctgtgtccaaagcaatgaattct
atcaggacgaggaggagggttgtgctgacaggaacacctctacaaaacaaccttgttgaa
taccactgcatggtgaactttatcaaggagaacctgctggggtcagttaaggagttcagg
aaccgcttcattaaccccattcagaatggacagtgtgccgactccacactacaagatgtc
cggattatgaagaaaagggctcacatcctctatgagatgctggctggctgtgtccagagg
aaagattacacggcactcaccaagttcctgcctcctaaacatgagtatgtgttgtcaatc
agagtgacccctatccagtgtaaactatatagatactacttggagcacttcacaggtgtg
gggaatgctttggaggggagccgcggccgtgcagggaccaaactcttccaggatttccag
atgctcagcagaatctggacccatccctggtgccttcagctggactacatcagtaaagaa
aacaggggtttctttgacgaggacagtatggatgagttcatcgcttcagaaacagaagaa
tcctccatgagtatgacctctgatgatgagaggacaaaaaagaaaaagaagcaagggaag
ggaaaaaagaaacaatctgatgactcggacagcgatgacgtggaggtcatcaaggagtgg
aacaccagctctcggggcagaaatggagagggtcgagtaagaccagagcctgtcgaagaa
gttcggcccactagctcagcaccagggagtcccaaccctgactggcacagggactttgtc
actgatgctgacgctgagatcctggagcactctggaaagatgatgctcctctttgagatc
ctccgcatggcagaggaagtagatgaaaaagtgttggtgttcagtcagtctcttatctct
ctggacctgattgaggatttcctggaactggcttgcagagctaaagatgaagataaagtc
tctccatacaaaggtgaaggcaagtggttcaggaacattgactactatcgcctggatggc
tccaccaacgccaccaccaggaagaagtgggctgaagagtttaatgacatcagtaatcca
agaggtcgtttattcctcatttccacgcgagctggctctcttggcatcaacctggtggca
gccaacagggtcatcatctttgatgcctcatggaacccctcctacgacgtccagagtatc
ttcagggtctaccgctttggtcagttgaggaccgtttatgtctacaggttcctggcccag
ggtacaatggaggagaagatttatgaccggcaggttaccaaacagtcgctgtcattccgt
gtggtggaccagcagcagattgagaggcactttacaacaaatgagctggccgagctttac
acatttgacccggacatgctggatgggccctcagagaagaagagcaagaaagccacgccc
ttgcttcccaaggatcccttcctggcggagatgctgcagaacaataaggaccagattgtg
tgttaccacgagcatgactccttgttggaccacaaggaggaggaagccctcagcgaggag
gatcgcaaggctgcctgggccgagtatgaagcagagaaaaagggtgtgtcgatgaggacc
aacttccagtctggatacccccagatggatatgggctcctccaactacttctcatttaac
atggctgctttggcctccatgaccaaccagcagctggaggagcttataaaccagggacga
cataaagtcattgaagcaacaaatgcgctgaagacgctaacacgcgagtcactggaagat
actatcgccagattgtggaaggagaacccagcactcacagagaatcaggtccaggccatg
gctctgggacggcaggccagtgtggagctggaggtgaagcggagggaaattgcgtaccgg
gatgttctcaccaggcagcagacgctgatgatgtacgtgcagaagctgatcaccaacagg
aaggtgcaggagcagcagatggccatggctaaccaggccagctacctgaaccagctggcc
atgcagaacggcatgatgggaggtgcagggctcagccagatggacctgctggggctttac
cagcagctccacggcctaaactcccatcaaggcatgggcaagaatcctgggccctccaag
ggcctgtag
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integrated database retrieval system
