Etheostoma cragini (Arkansas darter): 117951729
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Entry
117951729 CDS
T07493
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117951729 (rlim)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117951729 (rlim)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117951729 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117951729
NCBI-ProteinID:
XP_034739480
LinkDB
All DBs
Position
10:complement(13235208..13242384)
Genome browser
AA seq
694 aa
AA seq
DB search
MEGSDSLEQNGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNNSTSAPSTESGEDPVEPPENTEDPANGDSLLDWLNTVRRTG
NTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPQESPEGQE
GVASAEPQEAIAEPQEAIAEPQVENAEPEVENAEPEVENAEPEVENAEPEVPMDTEVVEE
PVIEELAVTVEQEPEPELEEVVSQEILGEPPSSPAALPVQPPLSPSPRRGQRRARSRSPE
PRRTRARTARSRSPLNLDQLDGLPNPRHAHSSQSMNSATIAPPVSQVEGSSRTRQHVLSR
QSAADSDVQPSRASAETVPEVQNMGPQEGEAAGGEGGAAGRRPPTIMLDLQVRRVRPGEY
RQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAG
LGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGANTPADLAEALNNPDAATPPA
AASAPVADVVEPPLAAGVRARTAEADIDEGLATAPPASGGRARPRPPISLEEPSTLPFLR
LAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGETDALKTCSVCITEYAEGNKLRKLPCSH
EYHVHCIDRWLSENSTCPICRRAVLISANRESVV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtttagagcaaaatggcagtgaccagccagagtcacagcgcaga
aggcagctggaccgcctggacagggaagaggccttctaccagtttgttaacaatctcagt
gatgaggactatcgtctcatgagagacaacaatcttttgggcaccccaggagaggtaaca
gaggatgagctgtttagtagactacagcaaatcaaggatggtccagaacagcagaataac
agtactagtgcccccagtactgaaagtggagaagatccagttgaaccaccagaaaacact
gaggatcctgccaatggggatagtctcttagactggttaaatacagtgaggcgtacaggc
aacacaactagaactggtcatcgtggaaaccagtcatggcgagctgtaagccagaccaac
ccaaacagtggcgattttcgctttagcctggaaatcagcgtgaatcgcaacctggctgaa
cagcaggctgctgctgaaggtgagcaggagtctccccaggagtctccagagggtcaagaa
ggggtagcaagtgctgaaccacaggaggcaattgctgaaccacaggaggcaattgctgaa
ccacaggtggaaaatgcggaaccagaggtggaaaatgctgaaccagaggtggaaaatgct
gaaccagaagtggaaaatgctgaaccagaggtgcccatggatacggaagtggtagaagaa
ccagttatagaggagttggctgtcacagtggagcaagaaccagagcctgaattagaagaa
gttgtttcacaagagattttaggagaacctcccagctcacctgccgccctgccggtacaa
cccccactttctccttctccacgcagaggacaaagacgagcccgcagccgcagtccagaa
ccacgcaggactagggcccgtacagccaggagccgttcccctctcaacctggatcagctg
gatggtctccctaatccacgtcatgcacacagctctcaaagcatgaactctgccaccatt
gctccccctgtgtctcaagtagagggcagttctcggactcgacaacatgttctttctagg
caaagcgctgctgacagtgatgttcagccatctagggctagtgcagaaacggtcccagag
gtccaaaatatgggacctcaagaaggagaagctgctgggggtgaagggggtgcagcgggg
cgccgcccccctactattatgcttgatctccaggtgcgtcgtgtgcgtcccggcgaatat
cgccaaagagacagcattgctagccgcacccgctcgcgatcccagaactcaaacaacaca
tttctttatgagagtgagcgtggtggatttcgtaggactttctcacgctctgaacgtgct
ggtgtgaggacctacgtcagcacaatacgaatccctatacgaagaatctctgatgcaggt
ttgggagaggcaacctcaatggctcttcaatctatgattagacagatcatgactggtttt
ggtgaacttggctacctcatggattcagactctgattcttcagattcaaaccgtggtgcc
aacacacctgcggatctggctgaagccctcaacaacccagatgctgctactcctcctgct
gctgcttctgctcctgttgccgatgttgttgaaccacctctggctgcaggagttagagca
aggacagcagaggctgatattgacgagggccttgctactgctccacctgcttcaggtggc
agggctcgacctagaccacctataagcctagaggagcccagcacgctgcccttcctgcgg
cttgcccacttcttcctcctaaatgatgacgatgaggaccagccccaagggctgactaaa
gagcagattgacaacctctcaatgcgcaactttggtgagactgatgccttgaaaacttgc
agtgtctgcataacagaatacgctgaaggtaacaagctacgaaagctgccctgctctcat
gagtaccacgtgcactgcattgatcgctggctatccgaaaactctacttgtcccatctgc
cgcagggctgtcttgatatcggccaaccgagagagcgtggtgtag
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