Etheostoma cragini (Arkansas darter): 117951866
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Entry
117951866 CDS
T07493
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117951866 (fmr1)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117951866 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
117951866 (fmr1)
mRNA cycle factors
Stress granule specific factors
117951866 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
Agenet
KH_1
Motif
Other DBs
NCBI-GeneID:
117951866
NCBI-ProteinID:
XP_034739718
LinkDB
All DBs
Position
10:complement(3262158..3288937)
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AA seq
608 aa
AA seq
DB search
MDELVVEVRGTSGAFYKAFVKDVHEGSVTVAFENNWQPERQIPFQDVRFPPPTGVCKEIN
ESDEVEVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNPNKP
ATKTTFIKIRLDVPEDLRQMCSKESAHKDFKKAVGAFNVTYDSEKKQLVILSVNEVTTKR
ANMMSDMHFRSVRTKLSLMLRNEEANRQLESSRQLASRFHEQFVVRDDLMGLAIGTHGAN
IQQARKVPGVTNIDLDEETCTFHIYGEDHDAVCIARSFLEFSEDVIKVPRNLVGKVIGKN
GKLIQEVVDKSGVVRVRIEPENDKKPSALAAAAAADDGLVPFVFVGTKESISNATVLLDY
HLNYLKEVDQLRLERLQIDEQLRQIGGGGGGGGTGPRTLKDKTYVFDNGMGLGMGRGAGG
GGGGGGGKPYGGGGGRGGRGRRGGGAAFASGTNSEASNASETESDHKDELSDWSLAPTEE
LMTGGGTLPRRTDGRRRAGGGGLRGRGGRGRGGGGYKGDDMQWSEPRPRHVRDPKTRAQE
DTLQIRVDGNERSVQHSSGGRGGGPSSSQGGGGAGGEGPSRHYHPRPIRDRGMKKDKQDA
PLLVNGVS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactagtcgtggaggtgaggggaacaagtggggccttttataaggcctttgtg
aaggatgttcacgaaggatccgtcactgtggcatttgaaaacaattggcagccagagcgt
caaatcccattccaggatgttcgttttcctcctccaacaggagtctgcaaggagatcaat
gagagcgatgaagtcgaggtatattccagggctaatgacaaagagccgtgtggatggtgg
ctggccaaggttcgcatggtcaaaggagagttttacgtaatagagtacgctgcatgtgac
gctacattaaatgagatagtgacgctggagcggttacggccggtcaaccccaataaacca
gccaccaaaaccaccttcatcaagatccgactggatgtaccagaagatctccgacagatg
tgctccaaggaatccgcacacaaagactttaaaaaggcagtgggagctttcaatgtcacc
tacgactcagagaaaaagcagctggtcattttgtctgtgaatgaggtcacgacaaagcgg
gccaatatgatgagtgacatgcacttcaggagcgtccgcaccaaactgtcactcatgctg
aggaacgaagaggccaacagacaactagagagttccaggcagctggcgtcgcggtttcat
gaacagtttgtggttcgggatgatctaatgggtctggccatcgggactcacggggctaac
attcagcaagcacgtaaagtcccgggagtcactaacatagacctggacgaggagacgtgc
acctttcacatatacggagaggaccacgacgctgtctgtatagcgaggagtttcctggag
ttctctgaagatgtcatcaaagttccccggaacttagtagggaaggtgattggcaaaaac
ggcaaactgatccaggaagtggtggataagtctggggtggttcgggttcgcattgagccc
gagaatgacaaaaagccctcagcactcgcagcagccgcagcagcagacgatggactggtg
ccatttgtatttgttgggaccaaggaaagcatctccaatgctacagtacttctggactat
cacctcaactaccttaaggaggtggatcagcttcgtctggagcgtctccagatcgacgag
cagctgagacagataggaggcggagggggaggaggagggacagggccccgaaccctcaaa
gacaaaacctacgtgttcgataacggcatggggctgggcatggggagaggagcaggggga
ggtggaggaggaggaggaggcaagccctacggaggagggggaggaagaggtggcagaggg
cgaagaggaggaggtgcagctttcgcctcaggcaccaactcggaggcatccaatgcttca
gagacggagtccgaccacaaagacgagctcagcgactggtcgctggcccccaccgaggag
ctgatgacagggggcgggaccctgcccagacggacagatgggaggaggagagcaggcgga
ggagggctgcgtggacgaggggggagaggaagaggaggaggggggtacaaaggtgatgac
atgcagtggagcgagccaagacctcgtcatgtcagagaccccaagacaagagcgcaggaa
gacactttacagattcgtgtggacggtaacgagcgcagcgtgcagcactcctcagggggg
cgaggaggagggccctcctcctcccagggcggcggcggtgccggcggcgagggcccatct
cgccattaccatccgagacccatcagagaccgagggatgaagaaagacaaacaggacgct
cctctgctggtgaacggagtgtcgtag
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