Etheostoma cragini (Arkansas darter): 117951884
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Entry
117951884 CDS
T07493
Symbol
gabrp
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04080
Neuroactive ligand-receptor interaction
ecra04082
Neuroactive ligand signaling
ecra04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117951884 (gabrp)
04082 Neuroactive ligand signaling
117951884 (gabrp)
04519 Cadherin signaling
117951884 (gabrp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117951884 (gabrp)
Ion channels [BR:
ecra04040
]
Ligand-gated channels
GABA-A
117951884 (gabrp)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Misat_Tub_SegII
Motif
Other DBs
NCBI-GeneID:
117951884
NCBI-ProteinID:
XP_034739748
LinkDB
All DBs
Position
10:complement(271796..277947)
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AA seq
446 aa
AA seq
DB search
MCVQLPTLLLLTLCLGVTQGNSWGEWNDSQLQPTIQKLMKGYNRYLRPNFNEGPVEIGMS
LDIASIDAISEINMDYTATIFLRQRWRDSRLVFPGNESVSVDGRLVSLLWIPDTFIPDSK
RSFLHDVTVENRLIRIFSDGTVLYALRITATIACNMDLTKYPMDRQVCTLQLESWGYNLQ
DVVFYWTRGNDSVKGLDVLRLAQYSVESYYTSVSEAVYETGQYPKLVLHFALRRNVLFFI
LETYVPSILLVVLSWVSFWISQSSVPARVCIGVTTVLTMTTLMMGARTSLPNANCFIKAI
DVYLGICFTFIFGALVEYACAHFYNMQNQTIEDVYRDLLREFTESNGNGSIPIVGSNRPN
QSVEVGSTAEELPEQSANSTTRNNVLSKEKVSGQGCSLSSVKDMSRRAASTFTVENPHNI
DRHARTVFPTAFLFVNILYWLYYLFL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgcagctgccaacgctactgctgctgaccctctgcctgggcgtcacacagggc
aacagctggggagaatggaacgactctcagcttcagccgacgattcagaagttgatgaaa
ggatacaaccgctacctcagacctaatttcaatgagggccctgtggaaattggaatgagc
cttgacatcgccagcattgatgccatctctgaaatcaacatggactacactgccaccatc
ttccttcgtcagcgctggcgggactccaggctggtgttcccgggaaatgagagtgtcagc
gtggatggacgtctcgtgtccctgctctggatccctgacaccttcatccctgactccaag
cgctccttcctgcatgacgtcacagtggaaaaccgcctcatccgcatattcagcgacgga
actgttctctatgccctgcgcatcacggctacaattgcctgcaacatggacctgaccaag
tatcccatggacagacaggtgtgcaccctgcagctggagagctggggctacaacctgcag
gatgtggtgttctactggaccagagggaatgattccgtcaagggtcttgacgtcctgcgg
ctggctcagtacagcgtagagagctactatacatcagtgtcagaggctgtgtatgagaca
ggtcaataccccaagctggtgttgcattttgcactgcgtagaaacgtgctgttctttatt
ttggagacgtatgttccctccatcctgcttgtggttctgtcctgggtctctttctggatc
agccagtcctctgtcccagctagggtctgtattggagtaacaacagtcctgacaatgacc
acactgatgatgggcgcccgcacgtccctgcccaacgccaactgcttcatcaaggccata
gatgtgtacctgggaatctgcttcaccttcatctttggtgcactggtggagtacgcctgt
gctcacttctataacatgcagaaccagaccatcgaggatgtatacagagatcttctgagg
gagttcactgaatccaatggaaacggctccatccccatcgtcggctccaaccgacccaac
cagtctgttgaggtcggctccactgcggaggagctcccggagcagtcagcgaacagcacc
actaggaacaatgtcctatctaaagagaaggtgtcaggacagggctgcagcttgtcttca
gtgaaggacatgtcacgcagggcagcttccaccttcactgtggagaatccgcacaacatt
gatcgccacgctcgcaccgttttccccacagcgtttctctttgtcaatatcctctactgg
ctttactatctctttctctaa
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