Etheostoma cragini (Arkansas darter): 117951909
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Entry
117951909 CDS
T07493
Name
(RefSeq) cohesin subunit SA-1 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117951909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117951909
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117951909
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
DHR-2_Lobe_C
HEAT_2
Cnd1
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
117951909
NCBI-ProteinID:
XP_034739774
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All DBs
Position
10:complement(22122226..22142327)
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AA seq
1215 aa
AA seq
DB search
MASGDSLLDSLEELDEFSDSDSDYEATTRAKKRRKQPVTGLQPPKRSRRKAALRVSSPSS
SPIPTPPNSPLQQHSLNRSRQASARPATRVNKGNRGISAEDIYDAVCSGKSAMVTVVDEW
LDNYKQSREAGLLVLINFIVQSCGCKGVVSREMLDNMQNAEIISTLTKEFNEDSVNYPLC
TPGPQLKRFKASLCEFIRVLVSSCRNSLVFDEYLFPSLLALLTGMSDSQVRAFRHTSTLL
AMKLMTGLVEVAVIVSVQLQTTQRQYDMENSKKEQDRAPDRLEELRATISELRENREEIS
SMMNATFRGVFVHRYRDRLPEIRAACIQELGMWLKTDPEDFLNDGCLKYLGWTLHDKQSP
VRLQCVRALQGLYQEKEFIGRLELFTSRFKERMLSMALDKDPEVAVEVVNLLLLIQQRTE
EGLKEEECGHIYPLVYALNRGLASAAGIFLFNKLKSVIASDNQKNDKSENAAFFQILISF
YIQSEFHEHGAYLVDSLWDVARSELREWETMTALLLQEDGLMYEEEGALIELMMCAIRQA
TQATPPVGRTQGKKILGMKDKKVQDQDKRRITTHFIPLLPQLLAKYSADAGKVSLLLKAP
LYFNLEMYNSAPRLEKYLDLLLSQICGIVEKHTEVTVLEACAQLASTLCSESYTFSSRAH
LAFSQLLDGLTECFSTYLSDLLQGTADDDDVYSAATALKRIAALSSAKDPTGWKLFDSCL
ELLKSRMESRELDKELLVSALKCAAFYLMWAKVNAVNSTPAEGELNRLKKEMRSFCRVCQ
MCLSVNQTEIRDQAFELLCDLLLLYSTSSARFEPALQVLVHLPSDSLRSEMAAFLLDYVF
SESEDAELDVEGEEEMKINLLQRRRNHLSGYCKLVLYGVLELSAATDIFKHYSKYFKDFG
DIIKETISKSKLISPIQSAKTVCLSLQQLFSEMLTEDHSRQDLDEIRDLAKRLAMSFGID
LHRVRKPLVALHMDGVRFAFREPREGEEPHTNVTFLEVLSEFSFKLLQQDRTQLAEFVKS
ECPSAALSWPSVRLYQRSLEGRSSSKARKQEGVDVVSTHSTPVAKRKRTTAQGSAASTVR
GSWLETSSIHSSLHTPALTSTAQRQPAKPLAPQKNSATPPDISSDLSEDDFSLESQIRKV
KPIKRYKLSSSQTGPTLDQQDLNSHLTLLSLIEDEDAEKEEPEIEDYESDSEHESTYTLP
STRHTSTSVLDELFE
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggagactcgctgttggacagtcttgaggaattggatgaattctcagattca
gacagtgactatgaggcgacaacgagagctaaaaagcgaagaaaacagccagtgactgga
cttcagccacccaagagatccaggcgtaaagctgcattgagggtatccagccccagcagc
agccccatccccacgcctccaaactcccccctgcagcagcactccctaaacagatccaga
caggcctctgctagacctgcgaccagagtgaacaagggaaacaggggcatcagtgcagag
gatatctatgacgctgtctgctctggaaagagtgccatggtgacggtggtggacgagtgg
ctggacaactacaagcaaagccgagaggcggggctgctggtgctcatcaacttcattgtt
cagtcctgcggatgcaaaggtgtggttagcagagagatgttggacaacatgcagaatgcc
gagatcatcagcacgctcaccaaagagttcaatgaggattcagtgaactaccctctatgc
accccaggcccccagctgaagcgattcaaagccagcctgtgcgagtttattcgggttctg
gtgagctcctgtcggaatagccttgtttttgatgagtacctcttcccctccctgttggct
ctgctcaccggcatgtctgactcccaagtcagagccttcagacacactagtaccctgctt
gccatgaagttaatgactgggctggtggaggtagctgtgatagtgtcggttcagctgcag
accacccagcggcaatatgacatggagaacagcaagaaggagcaagacagagcccctgac
agactggaggagctgcgggccaccatcagcgagttgcgggagaacagggaggagatatcc
tccatgatgaatgccacgttccgtggtgtgtttgtgcaccgttaccgtgaccggttgcct
gagatccgggctgcctgtattcaggagttgggcatgtggctgaaaacagaccctgaagac
ttcctgaatgatgggtgtcttaaatacctggggtggaccctgcatgacaagcaaagtcca
gtgcgtctgcagtgtgtccgtgccctgcagggtctgtaccaggagaaggaattcattggc
cgcctggagcttttcaccagcagatttaaagagaggatgctcagcatggcgctggacaaa
gacccagaggtggcagtggaagtggtcaatctgttgctgctgatccaacagaggacggag
gaaggtctgaaagaagaggagtgtggccacatctatcccctggtttacgctctaaacaga
ggcctggcctctgcagccggcatcttcctctttaacaagctgaaaagtgtgattgccagt
gacaaccagaagaatgataaaagtgaaaatgcagccttttttcaaatcctcatctccttc
tacatccagagtgagttccatgagcatggggcatacctggtggatagtctttgggatgtg
gcaagatctgagctgagagaatgggagactatgacggcattattgctacaggaagatggt
ctgatgtatgaggaggagggggctctcatagagctgatgatgtgtgccatcagacaggca
acacaggcaaccccccctgttgggagaactcagggcaagaagatcttgggtatgaaggat
aagaaggtccaggatcaagacaagaggcgtatcaccacacacttcatccccttactgccc
cagctgctggccaagtactccgcagatgcagggaaggtgagcctccttctcaaagctccc
ctctactttaacctggagatgtacaacagcgctccgcggctggagaagtatctggacctg
ctgctgtctcaaatatgtggtattgtggagaagcacacagaggtcactgtgctagaggct
tgcgcccaactggccagcaccctttgctccgagtcctacaccttctcctcccgcgcacac
ctggcattcagccagctactggatggcctgaccgagtgctttagcacctacttaagtgac
ctgctgcagggtactgcagatgacgatgacgtatatagtgcagccactgctttaaaaaga
attgcagccctcagcagcgccaaggaccctacaggctggaagctgttcgactcttgtcta
gagcttctgaaaagcaggatggagtcaagagagctcgacaaggagctcctggtgtcggct
ctgaagtgtgcagccttttacctgatgtgggccaaagtgaatgcagtcaactccacacca
gctgagggggaattgaaccgtctgaagaaggagatgcgttcgttctgcagagtttgtcaa
atgtgtctatctgtgaaccagactgagatcagagatcaagcatttgagctattgtgtgac
ttgctgctcttgtacagtacgagttcagctcgctttgaacccgccctccaagtgttggtc
catctgccgtcggattccctgcgctctgagatggctgctttcctcctggactacgtattc
tctgaaagtgaagatgctgagctcgatgttgaaggtgaggaggagatgaagataaatctt
ctccagaggaggcgcaaccacttgtctggctactgcaagctggtcctctacggggtgctg
gaactcagcgccgccaccgacatcttcaagcactacagcaagtattttaaagactttggc
gacatcattaaagagactataagcaagagcaagctcatcagtcccattcagagcgccaag
actgtgtgtctgagtctgcagcagctgttctcagagatgcttacggaggaccacagccga
caggatctcgatgagattagagacttggccaagaggcttgccatgagctttggcatcgat
cttcatcgtgtccgcaaaccactggtggccctgcacatggacggtgtacgttttgcattt
cgggaaccacgggagggagaagagccgcacacaaatgtgaccttcttggaggtcctcagc
gagttcagtttcaagttgctgcaacaggaccgcactcagctggctgagtttgtgaaatca
gagtgtcccagtgctgccctctcctggccatcagtcagactgtatcagcgttccttggag
ggccgctcctcttctaaagccagaaaacaagagggagttgatgtcgtctccacacatagt
acccctgtagctaaacgcaagaggaccactgctcagggttcagctgccagcacagtcaga
ggatcctggttggaaaccagcagtatccacagcagcctgcacacgccagccctcacctcc
actgcccagagacagccagccaaaccgcttgccccccaaaaaaacagtgccacaccacct
gatatcagcagtgacttgtctgaggatgacttctccttagagtcccaaatacgaaaggta
aagcccatcaaacgatacaaactctcctccagccagactggccctactttggatcagcaa
gacctgaactcccacctcaccttgctgtctttgattgaggacgaagatgcagaaaaagaa
gagcctgagattgaagattatgagagtgactctgaacatgaatctacatatacactgcca
tccacacgtcacacctccaccagtgtccttgatgagctgtttgagtga
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