Etheostoma cragini (Arkansas darter): 117952013
Help
Entry
117952013 CDS
T07493
Symbol
ehd1a
Name
(RefSeq) EH domain-containing protein 1a
KO
K12483
EH domain-containing protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117952013 (ehd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117952013 (ehd1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117952013 (ehd1a)
Membrane trafficking [BR:
ecra04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117952013 (ehd1a)
Exosome [BR:
ecra04147
]
Exosomal proteins
Proteins found in most exosomes
117952013 (ehd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EH
Dynamin_N
EHD_N
MMR_HSR1
GTP_EFTU
EF-hand_1
EF-hand_7
Roc
AAA_16
AAA_22
AAA_28
Gtr1_RagA
TsaE
AAA_7
AIG1
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
117952013
NCBI-ProteinID:
XP_034739949
LinkDB
All DBs
Position
10:complement(17823703..17838657)
Genome browser
AA seq
532 aa
AA seq
DB search
MFRKNLKKDPELFQNVSEGLRRLYRTKLFPLEDTYRFHDFHSPALEDADFDNKPMVLLVG
QYSTGKTTFIRHLMEQDFPGMRIGPEPTTDSFIAVMHGEQDGVIPGNALVVDPKKPFRKL
NAFGNAFLNRFMCAQMPNPVLESISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRI
ILLFDAHKLDISDEFSEVIRALKNHEDKMRVVLNKADQISTQQLMRVYGALMWSLGKIIN
TPEVVRVYIGSFWAQPLLVPDNRKLFEAEEQDLFLDIQSLPRNAALRKLNDLIKRARLAK
VQAYIISSLKKDMPSVFGKESKKKELIANLGEIYHKIEKEHQISPGDFPNLAKMQELLNG
QDFSKFAALKPKLLEAVEDMLANDIARLMAMVRQEEAAMPSQSVKGGAFEGTMNGPFGHG
YGEGASEGIDELEWVVGRDKPTYDEIFYTLSPINGKVSGAAAKKEMLKSKLPNTVLGKIW
KLADVDKDGLLDDEEFALANHLIKVKLEGHELPPSLPEHLVPPSKRGMVLEA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaaagaacttgaagaaggaccccgagctgtttcagaacgtgtcggaggggctg
cggcgactctaccggaccaaactgttcccgctagaggacacgtatcgattccacgacttc
cactcccctgcactcgaagatgccgacttcgacaacaagcccatggtcctcctcgtgggt
cagtactccaccgggaagaccaccttcatccggcacctcatggaacaggacttccctggt
atgcgcattggccccgagccgacaactgactctttcatcgcggtgatgcacggcgaacag
gacggggtgatacctggtaatgctctggttgtcgaccccaagaagcccttccgcaaactc
aacgcctttggcaatgcgtttctcaacaggttcatgtgtgcccagatgcctaaccccgtc
ctggagagcatcagtatcattgatactcctggaatcctgtccggagagaaacaaaggata
agcagaggttacgactttgccgcggtgctggagtggtttgcagagcgcgtggaccgcatc
attctcctgtttgacgcccacaagctggacatctcggacgagttctccgaggtcatccga
gctctgaagaaccacgaggacaaaatgcgtgtggtgctgaacaaggcggaccagatcagc
actcagcagctgatgagagtctacggagcgctgatgtggtctttggggaaaatcatcaac
acgcctgaggtggtgcgtgtgtacatcgggtcgttctgggcccagcccctgttggtccca
gacaacaggaagctgtttgaggccgaggagcaggacctgttcttagatatccagtcgttg
ccacgtaacgctgctctacgcaagctcaatgaccttatcaaacgagcacgccttgccaag
gtacaggcctacattatcagctctctgaaaaaagacatgccaagtgtgttcggaaaggaa
tccaagaagaaggagctgatagccaacctgggagaaatctaccataagatcgagaaggag
caccagatctcacctggggatttccccaaccttgccaagatgcaggagctgctgaatggc
caggacttctctaagttcgcagcgctgaagccaaagctgctggaggcggtggaggacatg
ctcgccaacgacattgcacgtctcatggcgatggtgcgccaggaagaagccgccatgccc
agccagtccgtcaagggtggagcctttgagggaaccatgaatggtccctttggtcatggc
tatggagagggtgccagcgaaggcatcgatgagctggagtgggtggtgggtcgcgacaag
cctacatatgatgaaatcttctacaccctctcacccatcaacggcaaagtgtctggcgct
gcagccaagaaggagatgctgaagtccaagctgcccaacacggtcctggggaagatctgg
aagctagcagatgtggataaagatggcctcctcgatgatgaggagttcgccctagccaac
cacctgatcaaagtgaagctggagggtcacgagttgccgccctccctgcctgaacacctg
gtgccaccgtccaaacgcgggatggtcctggaggcctag
DBGET
integrated database retrieval system
