Etheostoma cragini (Arkansas darter): 117952038
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Entry
117952038 CDS
T07493
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117952038 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecra01007
]
117952038 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117952038 (hars)
Enzymes [BR:
ecra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
117952038 (hars)
Amino acid related enzymes [BR:
ecra01007
]
Aminoacyl-tRNA synthetase
Class II (A)
117952038 (hars)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117952038 (hars)
Prokaryotic type
117952038 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
117952038
NCBI-ProteinID:
XP_034739987
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All DBs
Position
10:10328677..10341111
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AA seq
520 aa
AA seq
DB search
MLAVFCVRAFSGPGALRTATRLRSGHSLPGITVAQIDEEVAKLLQLKAQIGGDDGKHQFV
LKTAKGTRDYNPKQMAIRERVFNTIIGCFKRHGAETIDTPVFELKETLTGKYGEDSKLIY
DLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCD
FDIAGQYDGMIPDAECLKIVHEILSELDLGDFRIKVNDRRILDGMFAVCGVPDDKFRSIC
STVDKLDKMPWEDVKKEMVNEKGLSEEAADRIGEYVSLQGGMDLAERLLQDHRMSQSKQA
CAGLSDIKLLFSYLQLFQVTDKVVFDLSLARGLDYYTGIIYEAVLTQAGVAPAPAVAQNG
APAEESVGVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEALAEKVR
TTEVQVMVASAQKNLLEEKLRLITELWNAGIKAEVMYKKNPKLLSQLQHCEESGIPLVAI
LGEQELKDGVVKLRVVATREEVDISRADLIAEIKKRTSEA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgtgttctgtgttcgtgctttctctggtccgggggccctccgcactgcaaca
cggctccgatctgggcattctctaccggggatcactgttgcgcagattgatgaagaggta
gccaaactgttgcagctgaaggctcagataggaggagacgatggcaaacatcagtttgtc
ctcaagacggcaaagggaacgagggactacaaccccaagcagatggccatcagagagcga
gtcttcaacaccatcatcggctgcttcaaacgccacggagcggagaccatcgacacacct
gtttttgaactcaaggagacgctgacggggaaatatggagaagattccaagctcatctac
gacctcaaagaccagggaggagagctgctgtccctcagatatgacctcactgtgcccttt
gcccgctacctggccatgaacaagataaccaacatcaagcgctaccacatcgctaaggtg
taccgccgtgacaacccggccatgacccgcggacgctaccgagagttctaccaatgtgat
tttgacatcgcaggccagtacgatggcatgattccagatgctgagtgtctgaagattgtc
catgaaatcctcagtgagctggacctcggagacttccgtatcaaggtcaacgacagacgc
atcctcgacgggatgtttgctgtgtgcggcgtcccggatgacaagttccgctccatctgt
tctacagtggataaactggacaagatgccctgggaggacgtgaagaaggagatggtgaat
gagaagggcttatcggaggaggctgccgaccgaatcggagaatacgtcagtttgcaaggt
ggaatggacttagcagagcgcctcctgcaggaccacaggatgtctcagagcaagcaggcg
tgtgccggcctgtcggacatcaagctgctcttcagctacctgcagctcttccaggtcaca
gacaaggtggtgtttgatctgagtctggcccgcggcctcgactactacacaggaatcatt
tacgaggcggtgttgactcaggccggggtggccccggcacccgctgtagcccagaacggg
gcgccggcggaggagagcgtcggcgtgggcagcgtggcgggcggcgggcgctacgacggc
ctggtgggcatgttcgatcccaaaggcaggaaggtgccgtgtgtcggtgtcagcatcggc
atcgagaggatcttctccatcatggagcagaaggctgaggcgttagcagagaaggtccgg
accacggaggttcaggtgatggtggcgtctgctcagaagaacctgctggaggagaaactc
cgactcatcacggagctctggaacgctggcattaaggcagaggtgatgtataagaagaac
cccaaactgctgagtcagctgcagcactgtgaggagtcgggcatcccgctggtcgccatc
ctcggagaacaggagctgaaagatggagtggtcaagctccgcgtcgtggccaccagagag
gaggttgatatttccagagcagatcttatagctgagatcaagaagaggacctctgaggcc
tag
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