Etheostoma cragini (Arkansas darter): 117952066
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Entry
117952066 CDS
T07493
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04080
Neuroactive ligand-receptor interaction
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117952066
04082 Neuroactive ligand signaling
117952066
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117952066
Ion channels [BR:
ecra04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117952066
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Pyr4-TMTC
Mito_fiss_reg
Red1
Motif
Other DBs
NCBI-GeneID:
117952066
NCBI-ProteinID:
XP_034740040
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Position
10:16678669..16697979
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AA seq
567 aa
AA seq
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MNFSRKLTTALLLVLLAAQGCFSSKGEDRLFRRLFRRYNQFIRPVENVSDPVTVEFEVSM
SQLVKVDEVNQIMETNLWLRHVWNDYKLKWAPVDYDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTITWIPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPDWVRSVFLGVLPRVMLMRRPIDQGCSPPA
SITGGISGGNTKRKNSIGDGSGSGSVSVGGITGGVACAPLDGCTGVGGAASAGSSMNCVE
YGEMNRDMNRDMSRRCPYRGKEVPTPVPPPMVPPPPPPPPPPPPSQAPQTQVPQESELPK
VPRPLNAPSAVNAVVAFSVVSPEIKQAIESVKYIAENMRTRNKAKEVEDDWKYVAMVIDR
IFLWVFVTVCVLGTVGLFLQPLISFFQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctccaggaaactgacaaccgcactccttctggtgctcctcgcagcgcaaggc
tgtttttcatcgaagggggaggacagattatttcggaggttgttcaggaggtacaaccag
tttatacggccagtggagaatgtatcagatccagtcacagtggagtttgaggtgtccatg
tctcaactggtcaaagtggatgaggtgaatcagattatggaaaccaatctgtggctgaga
cacgtgtggaacgactacaaactgaaatgggcccctgttgactatgatgggattgagttc
atacgagttccatccaataaaatttggaggccagacattgttttgtacaacaatgctgta
ggtgacttccttgtggaagacaagaccaaggctctgctgaagtttgatggcaccatcacc
tggattcctccagctattttcaaatcttcctgccccatggacattacttacttccccttt
gactaccagaactgctctatgaagtttggctcctggacatacgacaaggccaagattgac
ctggtgctcattggctcaaaggtgaacctgaaagacttctgggaaagtggagagtgggag
atcatcgacgcaccaggatacaagcatgacatcaagtacaactgctgcgaggagatctac
ccggacatcacctactccttctacatccgccgcttgcctctcttctacaccatcaacctt
atcatcccctgcctcctcatctccttcctcacagtgctggtcttctacctcccgtctgac
tgcggcgagaaggtcaccttgtgtatctccgtcctcctctccctcactgtgtttctgctg
gtcatcactgagaccataccttcgacatcacttgtcatccctctgatcggcgagtacctc
ctcttcaccatgatttttgtcacactcagcatcgtcatcactgtctttgtgctaaatgtc
cactaccgcacccctatgactcacactatgccggactgggtgaggtctgtgttcctcggg
gtgctgcccagggtgatgctgatgaggcggcctatcgaccagggctgctccccccccgcc
agtattacaggagggatcagcgggggaaacacaaagagaaagaacagcataggagatgga
agtggctcaggaagtgtgagtgttgggggtataactgggggtgtggcgtgtgcaccgctg
gatggttgcacaggagtaggaggggccgcctcagctggcagctccatgaattgtgtggag
tatggtgagatgaaccgtgacatgaaccgggatatgagcaggaggtgcccctacagaggc
aaggaggtaccgactccggtccctcccccaatggtgcctcctcctcctcctcctcctcct
cctcctcccccctcacaggcacctcagacccaggtgccccaggagtcagagttgcccaag
gtgccaaggccgttaaatgccccttcggctgtcaatgcagttgttgccttctccgtggtg
tctccagagatcaagcaggccatagagagcgtgaagtacatcgcagagaacatgaggact
cgcaacaaagctaaagaggtggaggacgactggaagtacgttgccatggtcatcgacagg
atcttcctgtgggtttttgtgacagtgtgtgtgctgggaacagtgggactcttcctacag
ccactcattagcttctttcaatga
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