KEGG   Etheostoma cragini (Arkansas darter): 117952072
Entry
117952072         CDS       T07493                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ecra  Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecra03041]
    117952072 (smu1a)
Spliceosome [BR:ecra03041]
 Complex B
  Other components
   Complex B specific factors
    117952072 (smu1a)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML LisH_TPL Beta-prop_ACSF4 NBCH_WD40 Ge1_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_BBS7 Beta-prop_SCAP Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F VPS8_N WD_LRWD1 LisH Beta-prop_IFT122_2nd zf_topless DUF7165 LisH_PAC1 PA14
Other DBs
NCBI-GeneID: 117952072
NCBI-ProteinID: XP_034740061
LinkDB
Position
10:26725105..26731054
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLQRTLVTLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRQIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNLMMMDDAVLCMGFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCVSFCKDSSQILSASFDQIIRIHGLKSGKTLKEFRGHTSFVNEATFTPD
GHHIISASSDGTVKMWNIKTTECSNTFKPLGTSAGTDITVNNVIQLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIASYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctctggaggtggaatccgctgacgtgatccgtctgattatgcagtacttaaaagaa
aataatctgcagcggactctagtcaccctgcaggaggagaccaccgtgtccctgaacact
gtggatagtatagagagctttgtggcggacataaacagcggccactgggacactgtcctg
caagccatccagtccctcaagctgccagataagaccctgatagacctttatgaacaggtg
gtgttagagctgatcgagttgagagagttgggtgcagcccgttccctcctcaggcagact
gaccccatgatcatgctgaaacagacccagccagagagatacatccacctggagaacctg
ttggctcgctcttactttgatcccagagaggcgtacccagatggcagcagtaaggaaaaa
cgcagagcggccatcgcccaggccctggcaggggaggtcagcgtagtgccgccctctcgt
ctcatggctctgctgggacagtctctgaagtggcagcagcatcagggcctcctgcctcct
ggcatgactatcgatttgttcaggggtaaagctgctgttaaagatgttgaggaggagcgc
ttccccacccagctcagcagacagatcaagttcggacagaaatctcatgtggagtgttca
agattctcacctgacggtcagtatttggttactggctctgttgacggcttcatcgaggtc
tggaacttcaccaccggcaaaatccgaaaggatctgaagtaccaggctcaggataacctc
atgatgatggacgatgctgtgttgtgtatgggcttcagtcgggacacagagatgttggcc
actggagcccaggatgggaagatcaaggtgtggaagatccagagcggtcagtgtctgagg
aggtttgagcgcgcccacagtaaaggagtaacatgcgtcagtttctgtaaagacagcagc
cagatcctcagtgcctccttcgaccagataatcagaatccatggactgaagtcaggtaaa
actcttaaggaattccgcggccacacctcatttgtgaacgaggccaccttcactccagac
ggccaccacatcatcagcgcttcctcggacggcacagtcaagatgtggaacataaagacc
accgagtgctccaacaccttcaagcctctgggcacgtcagccggcaccgacatcacagtc
aacaacgtcatccagctgcccaagaacccggagcattttgtagtgtgtaaccgctccaac
acggtggtcatcatgaacatgcagggacagatcgtgaggagcttcagctccggtaagagg
gaaggaggtgactttgtgtgctgcaccctgtcgccccgcggcgagtggatctactgcgtg
ggtgaagactttgtgctctactgcttcagcacagtcaccggcaagctggagagaacgctg
acggtacacgagaaggacgtgatcggcatcgcccaccacccccatcagaacctcatcgcc
tcctacagtgaggatggtctgctgaagctctggaagccttga

DBGET integrated database retrieval system